Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g15800 Coffea canephora HOM05D003744 ORTHO05D004327 6.0e-97 357.5 175 100.0
Cc00_g30150 Coffea canephora HOM05D003744 ORTHO05D004327 2.0e-55 219.5 174 64.9
Potri.005G093600 Populus trichocarpa HOM05D003744 ORTHO05D004327 3.2e-50 202.2 174 60.3
CiPaw.05G168300 Carya illinoinensis HOM05D003744 ORTHO05D004327 1.8e-48 196.4 174 58.0
VMungo1383G1042 Vigna mungo HOM05D003744 ORTHO05D004327 1.8e-48 196.4 174 57.5
QL03p042814 Quercus lobata HOM05D003744 ORTHO05D004327 2.3e-48 196.1 173 57.2
QL03p058539 Quercus lobata HOM05D003744 ORTHO05D004327 2.3e-48 196.1 173 57.2
Glyma.18G216400 Glycine max HOM05D003744 ORTHO05D004327 6.8e-48 194.5 174 55.7
Lj1g0013770 Lotus japonicus HOM05D003744 ORTHO05D004327 6.8e-48 194.5 174 55.2
Phvul.008G080300 Phaseolus vulgaris HOM05D003744 ORTHO05D004327 6.8e-48 194.5 174 56.3
QL08p053649 Quercus lobata HOM05D003744 ORTHO05D004327 6.8e-48 194.5 173 56.6
Thecc.02G161400 Theobroma cacao HOM05D003744 ORTHO05D004327 8.8e-48 194.1 174 57.5
Ca_07785_v3 Cicer arietinum L. HOM05D003744 ORTHO05D004327 1.2e-47 193.7 174 55.2
PGSC0003DMG400024499 Solanum tuberosum HOM05D003744 ORTHO05D004327 1.2e-47 193.7 171 56.1
Lj8A264T57 Lonicera japonica HOM05D003744 ORTHO05D004327 1.5e-47 193.4 174 56.9
Lalb_Chr12g0205351 Lupinus albus HOM05D003744 ORTHO05D004327 1.5e-47 193.4 174 57.5
Sc23g0003470 Simmondsia chinensis HOM05D003744 ORTHO05D004327 1.5e-47 193.4 174 56.3
Cfa008732 Carpinus fangiana HOM05D003744 ORTHO05D004327 2.0e-47 193.0 174 56.9
Ciclev10031746m.g Citrus clementina HOM05D003744 ORTHO05D004327 2.0e-47 193.0 174 55.7
HanXRQChr11g0332851 Helianthus annuus HOM05D003744 ORTHO05D004327 2.0e-47 193.0 174 56.9
GSVIVG01012037001 Vitis vinifera HOM05D003744 ORTHO05D004327 2.0e-47 193.0 174 56.3
Manes.01G040712 Manihot esculenta HOM05D003744 ORTHO05D004327 4.4e-47 191.8 170 56.5
FvH4_4g36840 Fragaria vesca HOM05D003744 ORTHO05D004327 5.7e-47 191.4 174 56.3
Os08g0388900 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 5.7e-47 191.4 174 55.2
CAN.G781.16 Capsicum annuum HOM05D003744 ORTHO05D004327 7.5e-47 191.0 171 55.6
Gorai.008G149600 Gossypium raimondii HOM05D003744 ORTHO05D004327 7.5e-47 191.0 172 55.2
ECA233G3748 Erigeron canadensis HOM05D003744 ORTHO05D004327 1.3e-46 190.3 174 57.5
Gohir.D12G138100 Gossypium hirsutum HOM05D003744 ORTHO05D004327 1.3e-46 190.3 172 54.7
THA.LOC104814817 Tarenaya hassleriana HOM05D003744 ORTHO05D004327 1.3e-46 190.3 170 56.5
TPR.G35100 Trifolium pratense HOM05D003744 ORTHO05D004327 1.3e-46 190.3 171 53.8
Gohir.A12G134500 Gossypium hirsutum HOM05D003744 ORTHO05D004327 1.7e-46 189.9 174 55.2
Aa31LG9G10990 Aethionema arabicum HOM05D003744 ORTHO05D004327 2.2e-46 189.5 175 54.9
MSTRG.11446 Avicennia marina HOM05D003744 ORTHO05D004327 2.2e-46 189.5 174 55.2
RcHm_v2.0_Chr5g0044851 Rosa chinensis HOM05D003744 ORTHO05D004327 2.8e-46 189.1 174 54.6
CSS0044819 Camellia sinensis var. sinensis HOM05D003744 ORTHO05D004327 3.7e-46 188.7 174 56.3
RcHm_v2.0_Chr4g0446591 Rosa chinensis HOM05D003744 ORTHO05D004327 3.7e-46 188.7 174 55.2
Sabra05G0077500 Salix brachista HOM05D003744 ORTHO05D004327 3.7e-46 188.7 174 56.9
DCAR_026464 Daucus carota HOM05D003744 ORTHO05D004327 4.9e-46 188.3 171 55.0
Prupe.1G346500 Prunus persica HOM05D003744 ORTHO05D004327 6.3e-46 188.0 172 54.1
BolC1t01805H Brassica oleracea HOM05D003744 ORTHO05D004327 8.3e-46 187.6 175 54.9
DCAR_029703 Daucus carota HOM05D003744 ORTHO05D004327 8.3e-46 187.6 174 54.6
Os08g0389300 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 8.3e-46 187.6 174 52.9
Duzib132G0180 Durio zibethinus HOM05D003744 ORTHO05D004327 1.4e-45 186.8 173 53.2
Nitab4.5_0005862g0050 Nicotiana tabacum HOM05D003744 ORTHO05D004327 1.4e-45 186.8 166 56.0
PSO170G1927 Papaver somniferum HOM05D003744 ORTHO05D004327 1.4e-45 186.8 174 54.0
PSO384G3023 Papaver somniferum HOM05D003744 ORTHO05D004327 1.8e-45 186.4 171 55.6
Prupe.1G346400 Prunus persica HOM05D003744 ORTHO05D004327 1.8e-45 186.4 174 54.6
COL.COLO4_10100 Corchorus olitorius HOM05D003744 ORTHO05D004327 2.4e-45 186.0 174 54.0
Medtr7g073970 Medicago truncatula HOM05D003744 ORTHO05D004327 2.4e-45 186.0 174 52.3
Nn2g14543 Nelumbo nucifera HOM05D003744 ORTHO05D004327 2.4e-45 186.0 174 54.0
RcHm_v2.0_Chr5g0044921 Rosa chinensis HOM05D003744 ORTHO05D004327 2.4e-45 186.0 174 54.0
Aqoxy1G00571 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 3.1e-45 185.7 174 54.6
ClCG10G011930 Citrullus lanatus HOM05D003744 ORTHO05D004327 7.0e-45 184.5 174 54.0
MELO3C024026.2 Cucumis melo HOM05D003744 ORTHO05D004327 9.1e-45 184.1 174 54.0
CsaV3_3G031430 Cucumis sativus L. HOM05D003744 ORTHO05D004327 9.1e-45 184.1 174 54.0
MD15G1355200 Malus domestica HOM05D003744 ORTHO05D004327 9.1e-45 184.1 174 53.4
Prupe.4G276200 Prunus persica HOM05D003744 ORTHO05D004327 9.1e-45 184.1 174 54.0
Aa31LG6G6900 Aethionema arabicum HOM05D003744 ORTHO05D004327 1.2e-44 183.7 175 53.1
arahy.Tifrunner.gnm1.ann1.686LQU Arachis hypogaea HOM05D003744 ORTHO05D004327 1.6e-44 183.3 174 52.9
arahy.Tifrunner.gnm1.ann1.DDPE54 Arachis hypogaea HOM05D003744 ORTHO05D004327 1.6e-44 183.3 174 52.9
Atru.chr11.479 Acer truncatum HOM05D003744 ORTHO05D004327 2.0e-44 183.0 172 54.7
Eucgr.H03234 Eucalyptus grandis HOM05D003744 ORTHO05D004327 2.0e-44 183.0 171 54.4
Sed0024199 Sechium edule HOM05D003744 ORTHO05D004327 2.7e-44 182.6 174 53.4
TWI53G1840 Tripterygium wilfordii HOM05D003744 ORTHO05D004327 2.7e-44 182.6 174 54.0
arahy.Tifrunner.gnm1.ann1.G2KDP7 Arachis hypogaea HOM05D003744 ORTHO05D004327 4.5e-44 181.8 174 52.3
Dinv17603 Davidia involucrata HOM05D003744 ORTHO05D004327 4.5e-44 181.8 161 57.8
BraA01t01437Z Brassica rapa HOM05D003744 ORTHO05D004327 5.9e-44 181.4 175 53.1
Os08g0322600 Oryza sativa ssp. japonica HOM05D003744 ORTHO05D004327 5.9e-44 181.4 174 54.0
Sp7g21590 Schrenkiella parvula HOM05D003744 ORTHO05D004327 5.9e-44 181.4 173 53.2
CANSAT78G0298 Cannabis sativa HOM05D003744 ORTHO05D004327 7.7e-44 181.0 174 54.6
Migut.I00018 Erythranthe guttata HOM05D003744 ORTHO05D004327 7.7e-44 181.0 174 54.6
BcaC09g50959 Brassica carinata HOM05D003744 ORTHO05D004327 1.3e-43 180.3 175 52.6
C01p18750 Brassica napus HOM05D003744 ORTHO05D004327 1.3e-43 180.3 175 52.6
Thecc.02G176000 Theobroma cacao HOM05D003744 ORTHO05D004327 1.3e-43 180.3 172 51.7
AT4G23660 Arabidopsis thaliana HOM05D003744 ORTHO05D004327 1.7e-43 179.9 175 53.1
BolC7t45794H Brassica oleracea HOM05D003744 ORTHO05D004327 1.7e-43 179.9 175 52.6
PGR044G0777 Punica granatum HOM05D003744 ORTHO05D004327 1.7e-43 179.9 171 54.4
A01p14960 Brassica napus HOM05D003744 ORTHO05D004327 2.3e-43 179.5 175 52.0
Carub.0007s1748 Capsella rubella HOM05D003744 ORTHO05D004327 2.3e-43 179.5 175 52.6
arahy.Tifrunner.gnm1.ann1.KM1SID Arachis hypogaea HOM05D003744 ORTHO05D004327 2.9e-43 179.1 173 52.6
Cc04_g13930 Coffea canephora HOM05D003744 ORTHO05D004327 2.9e-43 179.1 175 53.7
Thhalv10025345m.g Eutrema salsugineum HOM05D003744 ORTHO05D004327 2.9e-43 179.1 175 52.6
Gohir.A12G137600 Gossypium hirsutum HOM05D003744 ORTHO05D004327 2.9e-43 179.1 173 53.8
Gohir.A12G137650 Gossypium hirsutum HOM05D003744 ORTHO05D004327 2.9e-43 179.1 173 53.8
AL7G29700 Arabidopsis lyrata HOM05D003744 ORTHO05D004327 5.0e-43 178.3 175 52.0
A03p54630 Brassica napus HOM05D003744 ORTHO05D004327 5.0e-43 178.3 175 52.0
Gorai.008G153000 Gossypium raimondii HOM05D003744 ORTHO05D004327 5.0e-43 178.3 175 54.3
MD11G1112600 Malus domestica HOM05D003744 ORTHO05D004327 5.0e-43 178.3 175 53.7
Gohir.D12G141600 Gossypium hirsutum HOM05D003744 ORTHO05D004327 6.6e-43 177.9 175 53.7
BcaNung03441 Brassica carinata HOM05D003744 ORTHO05D004327 1.9e-42 176.4 175 51.4
C07p52950 Brassica napus HOM05D003744 ORTHO05D004327 1.9e-42 176.4 175 51.4
BcaNung03181 Brassica carinata HOM05D003744 ORTHO05D004327 2.5e-42 176.0 175 51.4
BcaNung01074 Brassica carinata HOM05D003744 ORTHO05D004327 3.3e-42 175.6 175 51.4
arahy.Tifrunner.gnm1.ann1.1L5CCL Arachis hypogaea HOM05D003744 ORTHO05D004327 5.6e-42 174.9 172 51.7
Cc04_g13880 Coffea canephora HOM05D003744 ORTHO05D004327 7.2e-42 174.5 143 62.9
EL10Ac7g17368 Beta vulgaris HOM05D003744 ORTHO05D004327 2.8e-41 172.6 167 50.9
Lsat_1_v5_gn_6_17921 Lactuca sativa HOM05D003744 ORTHO05D004327 3.6e-41 172.2 171 53.2
Lj1g0011441 Lotus japonicus HOM05D003744 ORTHO05D004327 4.7e-41 171.8 167 52.7
SMO164G0212 Selaginella moellendorffii HOM05D003744 ORTHO05D004327 2.3e-40 169.5 171 48.5
Mapoly0100s0056 Marchantia polymorpha HOM05D003744 ORTHO05D004327 6.8e-40 167.9 171 47.4
Nitab4.5_0000852g0010 Nicotiana tabacum HOM05D003744 ORTHO05D004327 2.6e-39 166.0 155 53.5
vmacro07295 Vaccinium macrocarpon HOM05D003744 ORTHO05D004327 4.4e-39 165.2 156 53.8
Lj2g0000279 Lotus japonicus HOM05D003744 ORTHO05D004327 5.7e-39 164.9 174 48.9
RhsimUnG0157000 Rhododendron simsii HOM05D003744 ORTHO05D004327 2.2e-38 162.9 163 52.8
Zm00001eb190740 Zea mays HOM05D003744 ORTHO05D004327 2.2e-38 162.9 174 49.4
Rhsim09G0044700 Rhododendron simsii HOM05D003744 ORTHO05D004327 2.9e-38 162.5 153 54.9
Solyc03g114300.4 Solanum lycopersicum HOM05D003744 ORTHO05D004327 2.9e-38 162.5 151 53.6
Ah.15g093700 Amaranthus hybridus HOM05D003744 ORTHO05D004327 8.3e-38 161.0 154 52.6
SalBow1G6149 Salvia bowleyana HOM05D003744 ORTHO05D004327 1.4e-37 160.2 157 52.9
Peaxi162Scf00017g02835 Petunia axillaris HOM05D003744 ORTHO05D004327 2.4e-37 159.5 150 53.3
BcaB03g12405 Brassica carinata HOM05D003744 ORTHO05D004327 5.4e-37 158.3 175 47.4
Haze_11743 Corylus avellana HOM05D003744 ORTHO05D004327 7.0e-37 157.9 163 54.0
SalBow1G2569 Salvia bowleyana HOM05D003744 ORTHO05D004327 2.7e-36 156.0 153 53.6
AagrBONN_evm.TU.Sc2ySwM_340.154 Anthoceros agrestis HOM05D003744 ORTHO05D004327 3.5e-36 155.6 173 43.4
Duzib132G0191 Durio zibethinus HOM05D003744 ORTHO05D004327 1.0e-35 154.1 156 51.3
TAR374G0876 Trochodendron aralioides HOM05D003744 ORTHO05D004327 3.9e-35 152.1 102 69.6
BraA03t14530Z Brassica rapa HOM05D003744 ORTHO05D004327 6.6e-35 151.4 155 49.7
AUR62034614 Chenopodium quinoa HOM05D003744 ORTHO05D004327 8.6e-35 151.0 153 49.0
CBR_g5669 Chara braunii HOM05D003744 ORTHO05D004327 2.5e-34 149.4 172 45.3
HPP92_014779 Vanilla planifolia HOM05D003744 ORTHO05D004327 3.3e-34 149.1 166 46.4
MD11G1112700 Malus domestica HOM05D003744 ORTHO05D004327 7.3e-34 147.9 154 48.1
AUR62036656 Chenopodium quinoa HOM05D003744 ORTHO05D004327 1.6e-33 146.7 162 47.5
arahy.Tifrunner.gnm1.ann1.Z9T1G4 Arachis hypogaea HOM05D003744 ORTHO05D004327 2.8e-33 146.0 102 65.7
Pp3c17_13460 Physcomitrium patens HOM05D003744 ORTHO05D004327 4.7e-33 145.2 161 45.3
ATR1100G008 Amborella trichopoda HOM05D003744 ORTHO05D004327 8.0e-33 144.4 151 49.0
Sed0012155 Sechium edule HOM05D003744 ORTHO05D004327 2.6e-31 139.4 102 68.6
SHI31057 Sapria himalayana HOM05D000482 ORTHO05D000349 3.4e-31 139.0 153 47.1
SEGI_31034 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 9.8e-31 137.5 151 46.4
SEGI_29356 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 1.3e-30 137.1 162 43.2
Cpa.g.sc5.31 Carica papaya HOM05D003744 ORTHO05D004327 6.6e-27 124.8 80 72.5
Medtr3g111660 Medicago truncatula HOM05D003744 ORTHO05D004327 1.6e-25 120.2 133 45.9
Cre06.g291800 Chlamydomonas reinhardtii HOM05D003744 ORTHO05D004327 1.1e-24 117.5 172 38.4
TAR374G0013 Trochodendron aralioides HOM05D003744 ORTHO05D004327 1.4e-24 117.1 83 62.7
unitig_52.g17488 Utricularia gibba HOM05D003744 ORTHO05D004327 5.2e-24 115.2 174 40.8
MCO12G284 Micromonas commoda HOM05D003744 ORTHO05D004327 1.5e-23 113.6 179 38.0
CDE05G3331 Ceratophyllum demersum HOM05D003744 ORTHO05D004327 2.2e-22 109.8 127 44.1
TWI53G1336 Tripterygium wilfordii HOM05D003744 ORTHO05D004327 8.3e-22 107.8 119 48.7
MD16G1001300 Malus domestica HOM05D003744 ORTHO05D004327 1.1e-21 107.5 159 39.6
FAN17G0528 Fragaria x ananassa HOM05D003744 ORTHO05D004327 3.2e-21 105.9 116 49.1
TAR374G1156 Trochodendron aralioides HOM05D003744 ORTHO05D004327 1.6e-20 103.6 118 47.5
Aqoxy5G02199 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 2.1e-20 103.2 119 47.9
Aqoxy94s001 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 2.1e-20 103.2 119 47.9
Aqoxy94s003 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 2.1e-20 103.2 119 47.9
SEGI_19125 Sequoiadendron giganteum HOM05D003744 ORTHO05D004327 1.5e-18 97.1 119 42.0
TPR.G23229 Trifolium pratense HOM05D003744 ORTHO05D004327 2.3e-16 89.7 52 69.2
Haze_26705 Corylus avellana HOM05D003744 ORTHO05D004327 4.0e-16 89.0 170 30.0
SGA_v2.0_scaffold90G27943 Striga asiatica HOM05D003744 ORTHO05D004327 3.4e-15 85.9 98 48.0
Lalb_Chr12g0204281 Lupinus albus HOM05D003744 ORTHO05D004327 3.2e-13 79.3 119 42.9
Aqoxy5G00880 Aquilegia oxysepala HOM05D003744 ORTHO05D004327 5.4e-13 78.6 55 65.5
BcaC01g00486 Brassica carinata HOM05D003744 ORTHO05D004327 5.4e-13 78.6 97 47.4
Eucgr.G01369 Eucalyptus grandis HOM05D003744 ORTHO05D004327 1.5e-10 70.5 44 70.5
vmacro10898 Vaccinium macrocarpon HOM05D003744 ORTHO05D004327 1.9e-10 70.1 56 66.1
Potri.005G093700 Populus trichocarpa HOM05D003744 ORTHO05D004327 8.9e-08 61.2 41 65.9
C03p80520 Brassica napus HOM05D003744 ORTHO05D004327 4.4e-07 58.9 52 57.7
PRCOL_00006084 Prasinoderma coloniale HOM05D003744 ORTHO05D004327 4.9e-06 55.5 182 26.9


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