Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g15430 Coffea canephora HOM05D002504 ORTHO05D007555 1.3e-230 802.7 409 100.0
Oeu022629.1 Olea europaea HOM05D002504 ORTHO05D007555 3.2e-149 532.3 396 64.6
CSS0041593 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 4.6e-148 528.5 394 66.5
Dinv19925 Davidia involucrata HOM05D002504 ORTHO05D007332 1.3e-145 520.4 394 65.0
CSS0049848 Camellia sinensis var. sinensis HOM05D002504 ORTHO05D007555 2.1e-145 519.6 394 65.2
Dinv09821 Davidia involucrata HOM05D002504 ORTHO05D007555 2.6e-143 512.7 394 64.5
Actinidia34980 Actinidia chinensis HOM05D002504 ORTHO05D007555 7.6e-143 511.1 394 63.2
Rhsim12G0158700 Rhododendron simsii HOM05D002504 ORTHO05D007555 5.1e-139 498.4 398 61.3
Nitab4.5_0000269g0140 Nicotiana tabacum HOM05D002504 ORTHO05D007555 9.4e-133 477.6 407 59.5
Actinidia19055 Actinidia chinensis HOM05D002504 ORTHO05D007555 2.3e-131 473.0 373 62.5
Haze_07368 Corylus avellana HOM05D002504 ORTHO05D007555 9.7e-130 467.6 391 59.8
Solyc06g071010.4 Solanum lycopersicum HOM05D002504 ORTHO05D007555 1.3e-129 467.2 395 57.0
Nitab4.5_0007394g0010 Nicotiana tabacum HOM05D002504 ORTHO05D007555 3.7e-129 465.7 407 58.2
Sopen06g027310 Solanum pennellii HOM05D002504 ORTHO05D007555 3.7e-129 465.7 395 56.7
Manes.14G075600 Manihot esculenta HOM05D002504 ORTHO05D007555 1.1e-128 464.2 394 58.9
SalBow5G4081 Salvia bowleyana HOM05D002504 ORTHO05D007555 1.8e-128 463.4 389 60.9
Ciclev10020527m.g Citrus clementina HOM05D002504 ORTHO05D007555 5.3e-128 461.8 387 59.7
Peaxi162Scf00013g00007 Petunia axillaris HOM05D002504 ORTHO05D007555 3.4e-127 459.1 400 58.2
PGSC0003DMG400033071 Solanum tuberosum HOM05D002504 ORTHO05D007555 4.5e-127 458.8 389 57.3
Potri.015G064300 Populus trichocarpa HOM05D002504 ORTHO05D007555 1.3e-126 457.2 394 57.9
TAR374G0022 Trochodendron aralioides HOM05D002504 ORTHO05D007555 1.3e-126 457.2 394 56.6
Cfa018981 Carpinus fangiana HOM05D002504 ORTHO05D007555 3.8e-126 455.7 391 57.8
MSTRG.4344 Avicennia marina HOM05D002504 ORTHO05D007555 2.5e-125 453.0 395 59.7
Cpa.g.sc17.218 Carica papaya HOM05D002504 ORTHO05D007555 9.4e-125 451.1 389 56.0
Duzib068G0930 Durio zibethinus HOM05D002504 ORTHO05D007555 9.4e-125 451.1 389 59.4
QL10p015753 Quercus lobata HOM05D002504 ORTHO05D007555 2.1e-124 449.9 391 56.3
CiPaw.11G039400 Carya illinoinensis HOM05D002504 ORTHO05D007555 3.6e-124 449.1 376 61.2
TWI38G0829 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 1.8e-123 446.8 394 55.1
QL10p005074 Quercus lobata HOM05D002504 ORTHO05D007555 2.3e-123 446.4 391 55.8
TAR622G0915 Trochodendron aralioides HOM05D002504 ORTHO05D007555 2.3e-123 446.4 394 55.6
COL.COLO4_05456 Corchorus olitorius HOM05D002504 ORTHO05D007555 5.1e-123 445.3 389 57.1
Sabra15G0090100 Salix brachista HOM05D002504 ORTHO05D007555 1.1e-122 444.1 394 55.6
RcHm_v2.0_Chr7g0180701 Rosa chinensis HOM05D002504 ORTHO05D007555 2.6e-122 443.0 391 56.0
CAN.G628.37 Capsicum annuum HOM05D002504 ORTHO05D007555 4.4e-122 442.2 397 56.9
Migut.I00134 Erythranthe guttata HOM05D002504 ORTHO05D007555 5.7e-122 441.8 399 57.9
Gorai.007G035700 Gossypium raimondii HOM05D002504 ORTHO05D007555 8.2e-121 438.0 391 56.8
Gohir.D11G032900 Gossypium hirsutum HOM05D002504 ORTHO05D007555 1.1e-120 437.6 391 56.8
THA.LOC104808328 Tarenaya hassleriana HOM05D002504 ORTHO05D007555 1.1e-120 437.6 389 55.0
Thecc.03G080700 Theobroma cacao HOM05D002504 ORTHO05D007555 1.4e-120 437.2 389 56.8
TWI39G0444 Tripterygium wilfordii HOM05D002504 ORTHO05D007555 3.1e-120 436.0 395 55.2
Gohir.A11G029531 Gossypium hirsutum HOM05D002504 ORTHO05D007555 7.0e-120 434.9 391 56.5
FAN08G0998 Fragaria x ananassa HOM05D002504 ORTHO05D007555 1.2e-119 434.1 392 54.3
FvH4_5g15370 Fragaria vesca HOM05D002504 ORTHO05D007555 1.5e-119 433.7 392 54.6
FAN04G1481 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.0e-119 433.3 392 54.6
Prupe.5G187600 Prunus persica HOM05D002504 ORTHO05D007555 2.6e-119 433.0 391 54.2
MELO3C007518.2 Cucumis melo HOM05D002504 ORTHO05D007555 2.2e-118 429.9 391 54.7
Eucgr.A00822 Eucalyptus grandis HOM05D002504 ORTHO05D007555 2.2e-118 429.9 388 55.2
FAN18G2091 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.2e-118 429.9 392 54.1
FAN13G2799 Fragaria x ananassa HOM05D002504 ORTHO05D007555 2.9e-118 429.5 392 53.8
ClCG01G016490 Citrullus lanatus HOM05D002504 ORTHO05D007555 3.2e-117 426.0 392 54.3
arahy.Tifrunner.gnm1.ann1.XHUI7I Arachis hypogaea HOM05D002504 ORTHO05D007555 1.2e-116 424.1 395 53.2
CsaV3_6G042770 Cucumis sativus L. HOM05D002504 ORTHO05D007555 4.7e-116 422.2 389 54.5
arahy.Tifrunner.gnm1.ann1.WQI89G Arachis hypogaea HOM05D002504 ORTHO05D007555 6.1e-116 421.8 395 53.2
Lalb_Chr12g0196751 Lupinus albus HOM05D002504 ORTHO05D007555 2.3e-115 419.9 394 53.0
arahy.Tifrunner.gnm1.ann1.AAW7H5 Arachis hypogaea HOM05D002504 ORTHO05D007555 3.0e-115 419.5 395 52.7
Lj4g0008726 Lotus japonicus HOM05D002504 ORTHO05D007555 5.2e-115 418.7 394 52.3
TPR.G5442 Trifolium pratense HOM05D002504 ORTHO05D007555 8.8e-115 417.9 392 52.8
arahy.Tifrunner.gnm1.ann1.A4B6B0 Arachis hypogaea HOM05D002504 ORTHO05D007555 1.1e-114 417.5 403 51.9
Medtr3g078030 Medicago truncatula HOM05D002504 ORTHO05D007555 3.3e-114 416.0 392 52.6
Sed0014360 Sechium edule HOM05D002504 ORTHO05D007555 7.4e-114 414.8 392 52.3
Lsat_1_v5_gn_1_10961 Lactuca sativa HOM05D002504 ORTHO05D007555 1.3e-113 414.1 405 51.4
AT1G18850 Arabidopsis thaliana HOM05D002504 ORTHO05D007555 2.2e-113 413.3 394 54.3
CARHR019500 Cardamine hirsuta HOM05D002504 ORTHO05D007555 4.8e-113 412.1 389 54.2
Carub.0001s1850 Capsella rubella HOM05D002504 ORTHO05D007555 2.4e-112 409.8 414 52.4
Nn3g16999 Nelumbo nucifera HOM05D002504 ORTHO05D007555 2.4e-112 409.8 391 52.7
Atru.BG.192.p Acer truncatum HOM05D002504 ORTHO05D007555 4.1e-112 409.1 349 57.6
DCAR_001955 Daucus carota HOM05D002504 ORTHO05D007555 4.1e-112 409.1 396 53.5
AL1G31390 Arabidopsis lyrata HOM05D002504 ORTHO05D007555 7.0e-112 408.3 394 53.6
Thhalv10007868m.g Eutrema salsugineum HOM05D002504 ORTHO05D007555 2.0e-111 406.8 391 54.0
Glyma.17G097600 Glycine max HOM05D002504 ORTHO05D007555 3.5e-111 406.0 392 52.0
Psat5g114360 Pisum sativum HOM05D002504 ORTHO05D007555 4.5e-111 405.6 391 51.2
MD14G1195800 Malus domestica HOM05D002504 ORTHO05D007555 1.0e-110 404.4 397 51.6
VMungo1215G2696 Vigna mungo HOM05D002504 ORTHO05D007555 1.0e-110 404.4 392 50.0
A06p15070 Brassica napus HOM05D002504 ORTHO05D007555 5.0e-110 402.1 389 52.4
BraA06t24622Z Brassica rapa HOM05D002504 ORTHO05D007555 3.2e-109 399.4 389 51.7
PGR083G1477 Punica granatum HOM05D002504 ORTHO05D007555 9.4e-109 397.9 398 49.5
Phvul.003G192200 Phaseolus vulgaris HOM05D002504 ORTHO05D007555 6.1e-108 395.2 390 49.5
CANSAT78G1429 Cannabis sativa HOM05D002504 ORTHO05D007555 1.0e-107 394.4 388 52.1
TPR.G1695 Trifolium pratense HOM05D002504 ORTHO05D007555 2.3e-107 393.3 392 50.0
DCAR_001117 Daucus carota HOM05D002504 ORTHO05D007555 2.6e-106 389.8 393 51.9
Ca_16191_v3 Cicer arietinum L. HOM05D002504 ORTHO05D007555 3.4e-106 389.4 395 48.6
C05p17270 Brassica napus HOM05D002504 ORTHO05D007555 1.3e-105 387.5 416 48.6
BolC5t30427H Brassica oleracea HOM05D002504 ORTHO05D007555 1.3e-105 387.5 416 48.6
unitig_52.g17495 Utricularia gibba HOM05D002504 ORTHO05D007555 1.3e-105 387.5 392 51.0
Sp1g16830 Schrenkiella parvula HOM05D002504 ORTHO05D007555 4.8e-105 385.6 417 49.4
Sc10g0009970 Simmondsia chinensis HOM05D002504 ORTHO05D007555 2.4e-104 383.3 395 49.1
BcaC05g25787 Brassica carinata HOM05D002504 ORTHO05D007555 3.1e-104 382.9 416 47.8
BcaB07g31903 Brassica carinata HOM05D002504 ORTHO05D007555 4.5e-103 379.0 418 47.6
Aa31LG7G3620 Aethionema arabicum HOM05D002504 ORTHO05D007555 5.9e-103 378.6 389 50.6
Glyma.05G029300 Glycine max HOM05D002504 ORTHO05D007555 3.8e-102 375.9 397 48.9
Aqoxy3G03288 Aquilegia oxysepala HOM05D002504 ORTHO05D007555 1.1e-101 374.4 394 47.7
AUR62038455 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.1e-101 374.4 402 47.5
EL10As5g23568 Beta vulgaris HOM05D002504 ORTHO05D007555 7.2e-101 371.7 399 48.4
AUR62042153 Chenopodium quinoa HOM05D002504 ORTHO05D007555 1.0e-99 367.9 402 47.0
HanXRQChr06g0178031 Helianthus annuus HOM05D002504 ORTHO05D007555 6.8e-99 365.2 386 48.7
SGA_v2.0_scaffold56G20046 Striga asiatica HOM05D002504 ORTHO05D007555 7.5e-98 361.7 333 55.0
Ah.02g112510 Amaranthus hybridus HOM05D002504 ORTHO05D007555 1.7e-97 360.5 400 47.2
PSO591G0510 Papaver somniferum HOM05D002504 ORTHO05D007555 1.7e-97 360.5 393 49.4
SHI03355 Sapria himalayana HOM05D002504 ORTHO05D007555 1.1e-96 357.8 397 49.1
PSO832G2768 Papaver somniferum HOM05D002504 ORTHO05D007555 1.6e-95 354.0 393 48.1
MBI03_g18947_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 2.9e-94 349.7 392 45.2
Lj7P436T44 Lonicera japonica HOM05D002504 ORTHO05D007555 1.6e-92 344.0 310 56.5
Lj5P114T15 Lonicera japonica HOM05D002504 ORTHO05D007555 1.0e-91 341.3 265 61.5
MBI11_g21312_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 8.3e-89 331.6 391 44.0
HPP92_004873 Vanilla planifolia HOM05D002504 ORTHO05D007555 2.7e-87 326.6 403 42.9
PSO063G6525 Papaver somniferum HOM05D002504 ORTHO05D007555 1.3e-86 324.3 392 45.7
GSVIVG01008049001 Vitis vinifera HOM05D002504 ORTHO05D007555 2.3e-86 323.6 315 54.0
MBI03_g28522_MAGBIO Magnolia biondii HOM05D002504 ORTHO05D007555 3.3e-85 319.7 391 43.2
CDE07G0237 Ceratophyllum demersum HOM05D002504 ORTHO05D007555 2.1e-84 317.0 387 42.9
Nn5g27262 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.0e-83 314.7 270 56.7
ECA236G0190 Erigeron canadensis HOM05D002504 ORTHO05D007332 8.9e-75 285.0 281 49.1
Dinv02434 Davidia involucrata HOM05D002504 ORTHO05D007555 4.7e-68 262.7 181 70.2
ATR1120G016 Amborella trichopoda HOM05D002504 ORTHO05D007555 2.4e-59 233.8 420 36.4
Os01g0112100 Oryza sativa ssp. japonica HOM05D002504 ORTHO05D007555 2.1e-44 184.1 245 38.4
Duzib205G0461 Durio zibethinus HOM05D002504 ORTHO05D007555 8.7e-38 162.2 311 36.3
Zm00001eb334590 Zea mays HOM05D002504 ORTHO05D007555 2.5e-37 160.6 259 34.4
Zm00001eb126250 Zea mays HOM05D002504 ORTHO05D007555 1.1e-35 155.2 233 35.6
SEGI_18201 Sequoiadendron giganteum HOM05D002504 ORTHO05D007555 3.1e-35 153.7 356 30.9
Aa31LG9G8990 Aethionema arabicum HOM05D000710 ORTHO05D000336 8.7e-30 135.6 268 36.6
Pp3c1_3820 Physcomitrium patens HOM05D002504 ORTHO05D007555 9.6e-29 132.1 459 25.9
Pp3c1_3850 Physcomitrium patens HOM05D002504 ORTHO05D007555 9.6e-29 132.1 459 25.9
Nn5g27265 Nelumbo nucifera HOM05D002504 ORTHO05D007555 1.1e-27 128.6 431 28.5
Ciclev10033409m.g Citrus clementina HOM05D002504 ORTHO05D007555 3.1e-27 127.1 180 43.3
AagrBONN_evm.TU.Sc2ySwM_369.370 Anthoceros agrestis HOM05D002504 ORTHO05D007555 4.5e-26 123.2 376 27.4
BcaB07g32205 Brassica carinata HOM05D002504 ORTHO05D007555 4.5e-26 123.2 389 27.0
Sabra12G0030300 Salix brachista HOM05D002504 ORTHO05D007555 4.2e-24 116.7 181 43.6
Mapoly0028s0021 Marchantia polymorpha HOM05D002504 ORTHO05D007555 1.0e-22 112.1 408 23.0
SMO367G0630 Selaginella moellendorffii HOM05D002504 ORTHO05D007555 1.4e-14 85.1 365 23.6
arahy.Tifrunner.gnm1.ann1.8LRZ9F Arachis hypogaea HOM05D002504 ORTHO05D007555 2.0e-13 81.3 254 27.6
Dinv09820 Davidia involucrata HOM05D000025 ORTHO05D000450 1.4e-08 65.1 47 72.3
CBR_g26261 Chara braunii HOM05D002504 ORTHO05D007555 4.7e-07 60.1 276 25.7


User provided reference genes

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