Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 4.0e-153 544.7 264 100.0
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.8e-121 439.5 264 75.8
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 6.7e-116 421.0 264 73.9
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 8.2e-114 414.1 264 73.5
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 5.3e-113 411.4 264 72.0
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.3e-111 406.8 264 70.8
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.9e-111 405.6 264 74.2
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 3.8e-111 405.2 264 69.3
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 6.5e-111 404.4 264 72.7
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.4e-110 403.3 264 73.9
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 3.2e-110 402.1 253 74.3
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 7.2e-110 401.0 262 69.8
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 1.2e-109 400.2 264 71.2
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.7e-109 399.1 264 72.3
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 6.1e-109 397.9 264 69.3
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 1.0e-108 397.1 262 67.6
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 1.0e-108 397.1 264 72.3
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 6.7e-108 394.4 264 70.1
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.1e-107 393.7 266 71.1
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.1e-107 393.7 264 69.7
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.7e-106 389.8 264 70.8
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.7e-106 389.8 264 68.6
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 1.7e-106 389.8 264 68.9
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 2.2e-106 389.4 263 70.7
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.4e-105 386.0 253 70.0
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 9.1e-105 384.0 270 67.0
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 7.7e-104 380.9 265 68.3
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.0e-103 380.6 252 69.4
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.7e-103 379.8 265 66.8
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 5.0e-103 378.3 265 66.4
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 8.5e-103 377.5 264 65.5
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.9e-102 376.3 265 66.0
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 7.2e-102 374.4 220 78.2
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 1.6e-101 373.2 264 65.5
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.1e-101 372.9 264 65.2
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 6.1e-101 371.3 263 68.8
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 8.0e-101 370.9 253 68.0
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.0e-100 370.5 268 65.7
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.4e-100 370.2 264 65.9
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.8e-100 369.8 265 65.3
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 2.3e-100 369.4 264 64.4
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 3.0e-100 369.0 262 66.4
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 2.0e-99 366.3 264 64.0
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 2.0e-99 366.3 264 64.0
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.8e-98 362.5 264 64.0
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 2.8e-98 362.5 267 64.0
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 8.2e-98 360.9 264 64.0
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 1.8e-97 359.8 254 66.9
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.8e-97 359.8 266 65.4
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 4.1e-97 358.6 263 62.7
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 7.0e-97 357.8 267 64.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.6e-96 356.7 265 64.5
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 4.5e-96 355.1 254 66.1
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 1.0e-95 354.0 307 56.7
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.3e-95 353.6 265 63.4
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.0e-95 351.7 256 64.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 8.5e-95 350.9 256 64.5
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.1e-94 350.5 256 64.1
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.5e-94 348.2 265 62.6
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.5e-94 348.2 256 63.7
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.2e-93 347.1 264 66.7
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 5.7e-91 338.2 225 68.4
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.5e-88 328.6 248 62.9
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.7e-88 327.8 268 60.1
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 7.7e-88 327.8 264 60.2
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.5e-86 323.6 220 64.5
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 3.2e-86 322.4 254 61.8
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 8.0e-85 317.8 219 68.9
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 6.8e-84 314.7 266 57.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 7.0e-81 304.7 264 56.1
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 4.5e-80 302.0 224 63.8
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.1e-77 293.1 228 61.0
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 2.0e-75 286.6 265 53.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 5.9e-72 275.0 178 71.9
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.0e-71 274.2 179 69.8
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.3e-60 236.5 173 65.3
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 2.3e-60 236.5 173 65.3
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.1e-57 227.6 179 57.0
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 6.6e-55 218.4 283 44.9
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 3.3e-54 216.1 161 60.9
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 3.1e-52 209.5 181 56.9
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 2.2e-50 203.4 132 67.4
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 8.6e-47 191.4 203 49.3
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 2.8e-45 186.4 121 71.9
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 5.8e-43 178.7 131 61.8
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.5e-38 164.1 143 55.2
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 3.4e-35 152.9 100 72.0
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 6.0e-32 142.1 106 58.5
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-31 140.6 110 57.3
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 9.0e-28 128.3 316 28.2
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.6e-27 126.7 316 28.2
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 6.4e-26 122.1 101 57.4
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 2.5e-22 110.2 92 54.3
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.4e-20 103.6 59 71.2
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.3e-20 102.4 59 69.5
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.8e-15 87.4 64 62.5
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 5.1e-15 85.9 75 57.3


User provided reference genes

Program Settings