Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g12770 Coffea canephora HOM05D000181 ORTHO05D007068 9.8e-46 186.4 93 100.0
Cc04_g12710 Coffea canephora HOM05D000181 ORTHO05D007068 6.3e-45 183.7 92 98.9
Cc05_g01550 Coffea canephora HOM05D000181 ORTHO05D007068 8.3e-45 183.3 92 97.8
DCAR_013723 Daucus carota HOM05D000181 ORTHO05D007068 6.4e-37 157.1 92 84.8
Dinv42476 Davidia involucrata HOM05D000181 ORTHO05D007068 1.4e-36 156.0 92 83.7
CSS0042976 Camellia sinensis var. sinensis HOM05D000181 ORTHO05D007068 2.4e-36 155.2 92 82.6
Oeu034062.1 Olea europaea HOM05D000181 ORTHO05D007068 7.0e-36 153.7 92 80.4
Peaxi162Scf00006g01615 Petunia axillaris HOM05D000181 ORTHO05D007068 7.0e-36 153.7 92 80.4
MSTRG.7078 Avicennia marina HOM05D000181 ORTHO05D007068 9.2e-36 153.3 92 79.3
Nitab4.5_0006529g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 2.7e-35 151.8 92 79.3
Sc10g0005160 Simmondsia chinensis HOM05D000181 ORTHO05D007068 7.8e-35 150.2 92 80.4
Solyc02g079000.4 Solanum lycopersicum HOM05D000181 ORTHO05D007068 1.0e-34 149.8 92 75.0
Sopen02g023810 Solanum pennellii HOM05D000181 ORTHO05D007068 1.0e-34 149.8 92 75.0
Nn7g38234 Nelumbo nucifera HOM05D000181 ORTHO05D007068 1.3e-34 149.4 92 79.3
AUR62040740 Chenopodium quinoa HOM05D000181 ORTHO05D007068 1.7e-34 149.1 92 77.2
TAR627G0133 Trochodendron aralioides HOM05D000181 ORTHO05D007068 2.3e-34 148.7 92 78.3
AUR62032086 Chenopodium quinoa HOM05D000181 ORTHO05D007068 3.0e-34 148.3 92 77.2
Migut.M01524 Erythranthe guttata HOM05D000181 ORTHO05D007068 3.0e-34 148.3 92 77.2
Thecc.07G182000 Theobroma cacao HOM05D000181 ORTHO05D007068 3.0e-34 148.3 92 78.3
Prupe.4G132700 Prunus persica HOM05D000181 ORTHO05D007068 3.9e-34 147.9 92 78.3
MD05G1229800 Malus domestica HOM05D000181 ORTHO05D007068 6.6e-34 147.1 92 78.3
Potri.010G171300 Populus trichocarpa HOM05D000181 ORTHO05D007068 8.6e-34 146.7 92 76.1
Gorai.013G144900 Gossypium raimondii HOM05D000181 ORTHO05D007068 1.1e-33 146.4 92 77.2
VMungo1127G1754 Vigna mungo HOM05D000004 ORTHO05D007068 1.1e-33 146.4 92 76.1
CiPaw.11G060900 Carya illinoinensis HOM05D000181 ORTHO05D007068 1.5e-33 146.0 92 77.2
arahy.Tifrunner.gnm1.ann1.1IB7AW Arachis hypogaea HOM05D000181 ORTHO05D007068 1.9e-33 145.6 92 76.1
arahy.Tifrunner.gnm1.ann1.HBHB6G Arachis hypogaea HOM05D000181 ORTHO05D007068 1.9e-33 145.6 92 76.1
TWI38G0335 Tripterygium wilfordii HOM05D000181 ORTHO05D007068 2.5e-33 145.2 92 77.2
unitig_748.g7620 Utricularia gibba HOM05D000181 ORTHO05D007068 4.3e-33 144.4 92 73.9
EL10Ac2g03239 Beta vulgaris HOM05D000181 ORTHO05D007068 5.6e-33 144.1 92 77.2
CAN.G891.3 Capsicum annuum HOM05D000181 ORTHO05D007068 5.6e-33 144.1 92 75.0
Gohir.D13G128800 Gossypium hirsutum HOM05D000181 ORTHO05D007068 5.6e-33 144.1 92 76.1
CAN.G1460.1 Capsicum annuum HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 73.9
Duzib213G0016 Durio zibethinus HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 76.1
Gohir.A13G125100 Gossypium hirsutum HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 75.0
Phvul.011G177500 Phaseolus vulgaris HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 73.9
PGR031G2481 Punica granatum HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 73.9
THA.LOC104812371 Tarenaya hassleriana HOM05D000181 ORTHO05D007068 7.3e-33 143.7 92 76.1
Eucgr.F04462 Eucalyptus grandis HOM05D000181 ORTHO05D007068 1.2e-32 142.9 92 75.0
RcHm_v2.0_Chr5g0024281 Rosa chinensis HOM05D000181 ORTHO05D007068 1.2e-32 142.9 92 75.0
GSVIVG01036763001 Vitis vinifera HOM05D000181 ORTHO05D007068 1.6e-32 142.5 92 76.1
PSO675G5464 Papaver somniferum HOM05D000181 ORTHO05D007068 2.8e-32 141.7 92 76.1
FvH4_3g14760 Fragaria vesca HOM05D000181 ORTHO05D007068 3.6e-32 141.4 92 73.9
FAN16G1891 Fragaria x ananassa HOM05D000181 ORTHO05D007068 3.6e-32 141.4 92 73.9
FAN21G2082 Fragaria x ananassa HOM05D000181 ORTHO05D007068 3.6e-32 141.4 92 73.9
ClCG02G018660 Citrullus lanatus HOM05D000181 ORTHO05D007068 6.2e-32 140.6 92 72.8
PSO675G4612 Papaver somniferum HOM05D000181 ORTHO05D007068 6.2e-32 140.6 92 76.1
GSVIVG01019160001 Vitis vinifera HOM05D000181 ORTHO05D007068 8.1e-32 140.2 92 75.0
FAN25G2563 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.1e-31 139.8 92 73.9
Sed0005173 Sechium edule HOM05D000181 ORTHO05D007068 1.1e-31 139.8 92 71.7
AL2G40200 Arabidopsis lyrata HOM05D000181 ORTHO05D007068 1.4e-31 139.4 92 72.8
Carub.0002s2642 Capsella rubella HOM05D000181 ORTHO05D007068 1.4e-31 139.4 92 72.8
Thhalv10018071m.g Eutrema salsugineum HOM05D000181 ORTHO05D007068 1.4e-31 139.4 92 72.8
FAN11G1148 Fragaria x ananassa HOM05D000181 ORTHO05D007068 1.8e-31 139.0 92 73.9
HanXRQChr03g0078201 Helianthus annuus HOM05D000181 ORTHO05D007068 1.8e-31 139.0 92 75.0
Nitab4.5_0021524g0020 Nicotiana tabacum HOM05D000181 ORTHO05D007068 1.8e-31 139.0 83 78.3
Lj3g0011719 Lotus japonicus HOM05D000181 ORTHO05D007068 2.3e-31 138.7 92 71.7
QL04p087205 Quercus lobata HOM05D000181 ORTHO05D007068 2.3e-31 138.7 92 72.8
Sp5g34620 Schrenkiella parvula HOM05D000181 ORTHO05D007068 3.1e-31 138.3 92 71.7
Aqoxy1G01434 Aquilegia oxysepala HOM05D000181 ORTHO05D007068 4.0e-31 137.9 92 73.9
Glyma.08G237500 Glycine max HOM05D000181 ORTHO05D007068 4.0e-31 137.9 92 72.8
Manes.06G176300 Manihot esculenta HOM05D000181 ORTHO05D007068 4.0e-31 137.9 92 73.9
Haze_07800 Corylus avellana HOM05D000181 ORTHO05D007068 5.2e-31 137.5 92 72.8
Ciclev10004242m.g Citrus clementina HOM05D000181 ORTHO05D007068 6.8e-31 137.1 92 71.7
Lalb_Chr01g0007221 Lupinus albus HOM05D000181 ORTHO05D007068 6.8e-31 137.1 92 70.7
Aa31LG4G1430 Aethionema arabicum HOM05D000181 ORTHO05D007068 8.9e-31 136.7 92 70.7
ATR0752G106 Amborella trichopoda HOM05D000181 ORTHO05D007068 8.9e-31 136.7 92 73.9
BcaB02g07225 Brassica carinata HOM05D000181 ORTHO05D007068 8.9e-31 136.7 92 71.7
CARHR073220 Cardamine hirsuta HOM05D000181 ORTHO05D007068 8.9e-31 136.7 92 71.7
C06p29810 Brassica napus HOM05D000181 ORTHO05D007068 1.2e-30 136.3 92 70.7
BolC6t38142H Brassica oleracea HOM05D000181 ORTHO05D007068 1.2e-30 136.3 92 70.7
BraA07t30351Z Brassica rapa HOM05D000181 ORTHO05D007068 1.2e-30 136.3 92 70.7
CDE06G0559 Ceratophyllum demersum HOM05D000181 ORTHO05D007068 1.5e-30 136.0 92 71.7
AT1G79560 Arabidopsis thaliana HOM05D000181 ORTHO05D007068 2.0e-30 135.6 92 70.7
Lsat_1_v5_gn_7_69480 Lactuca sativa HOM05D000181 ORTHO05D007068 2.0e-30 135.6 92 71.7
ECA240G0620 Erigeron canadensis HOM05D000181 ORTHO05D007068 3.4e-30 134.8 92 70.7
Cpa.g.sc32.46 Carica papaya HOM05D000181 ORTHO05D007068 4.4e-30 134.4 92 69.6
MELO3C019635.2 Cucumis melo HOM05D000181 ORTHO05D007068 4.4e-30 134.4 89 73.0
A07p27070 Brassica napus HOM05D000181 ORTHO05D007068 7.5e-30 133.7 92 69.6
CANSAT80G1988 Cannabis sativa HOM05D000181 ORTHO05D007068 9.8e-30 133.3 92 71.7
Oeu044451.1 Olea europaea HOM05D000181 ORTHO05D007068 1.3e-29 132.9 80 78.8
Ca_25910_v3 Cicer arietinum L. HOM05D000181 ORTHO05D007068 2.9e-29 131.7 92 69.6
CsaV3_6G013510 Cucumis sativus L. HOM05D000181 ORTHO05D007068 2.9e-29 131.7 92 68.5
Psat4g137600 Pisum sativum HOM05D000181 ORTHO05D007068 1.1e-28 129.8 92 67.4
TPR.G9423 Trifolium pratense HOM05D000181 ORTHO05D007068 1.1e-28 129.8 92 67.4
Medtr8g056860 Medicago truncatula HOM05D000181 ORTHO05D007068 1.9e-28 129.0 92 66.3
Cc00_g28370 Coffea canephora HOM05D000181 ORTHO05D007068 2.1e-27 125.6 64 95.3
Lj2C14G7 Lonicera japonica HOM05D000181 ORTHO05D007068 6.0e-27 124.0 92 68.5
SGA_v2.0_scaffold7G03612 Striga asiatica HOM05D000181 ORTHO05D007068 2.3e-26 122.1 92 66.3
HPP92_000846 Vanilla planifolia HOM05D000181 ORTHO05D007068 3.0e-26 121.7 92 65.2
Sabra10G0130900 Salix brachista HOM05D000181 ORTHO05D007068 2.2e-21 105.5 92 60.9
Cc00_g28520 Coffea canephora HOM05D000181 ORTHO05D007068 8.4e-21 103.6 49 98.0
COL.COLO4_19750 Corchorus olitorius HOM05D000181 ORTHO05D007068 1.2e-16 89.7 57 75.4
SEGI_14317 Sequoiadendron giganteum HOM05D000181 ORTHO05D007068 6.4e-13 77.4 62 62.9
Mapoly0006s0083 Marchantia polymorpha HOM05D000181 ORTHO05D007068 1.7e-10 69.3 90 44.4
SMO356G0491 Selaginella moellendorffii HOM05D000181 ORTHO05D007068 3.9e-10 68.2 86 44.2
GSVIVG01026110001 Vitis vinifera HOM05D000181 ORTHO05D007068 5.1e-10 67.8 46 76.1
AagrBONN_evm.TU.Sc2ySwM_344.4106 Anthoceros agrestis HOM05D000181 ORTHO05D007068 1.5e-09 66.2 91 45.1
Pp3c7_7530 Physcomitrium patens HOM05D000181 ORTHO05D007068 3.3e-09 65.1 91 44.0


User provided reference genes

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