Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g12560 Coffea canephora HOM05D004617 ORTHO05D005531 3.2e-173 611.7 319 100.0
Dinv38556 Davidia involucrata HOM05D004617 ORTHO05D005531 8.7e-110 401.0 303 70.0
CSS0013084 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 4.5e-106 388.7 303 68.6
Dinv20620 Davidia involucrata HOM05D004617 ORTHO05D005531 5.8e-106 388.3 303 68.0
CSS0042906 Camellia sinensis var. sinensis HOM05D004617 ORTHO05D005531 6.4e-105 384.8 317 65.9
CAN.G338.4 Capsicum annuum HOM05D004617 ORTHO05D005531 4.6e-103 378.6 307 65.8
Nitab4.5_0001284g0070 Nicotiana tabacum HOM05D004617 ORTHO05D005531 1.0e-102 377.5 303 66.3
Nitab4.5_0011992g0040 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.0e-102 375.9 307 65.5
PGSC0003DMG400018106 Solanum tuberosum HOM05D004617 ORTHO05D005531 1.1e-101 374.0 303 66.3
Rhsim12G0166500 Rhododendron simsii HOM05D004617 ORTHO05D005531 6.2e-100 368.2 350 60.0
Solyc03g112550.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 1.8e-99 366.7 303 65.7
TAR629G3522 Trochodendron aralioides HOM05D004617 ORTHO05D005531 9.0e-99 364.4 305 65.9
vmacro16629 Vaccinium macrocarpon HOM05D004617 ORTHO05D005531 2.0e-98 363.2 337 60.5
Sopen03g031610 Solanum pennellii HOM05D004617 ORTHO05D005531 3.4e-98 362.5 303 65.3
GSVIVG01007687001 Vitis vinifera HOM05D004617 ORTHO05D005531 1.0e-94 350.9 305 64.3
Migut.O00131 Erythranthe guttata HOM05D004617 ORTHO05D005531 3.0e-94 349.4 302 63.9
Oeu001681.1 Olea europaea HOM05D004617 ORTHO05D005531 6.7e-94 348.2 303 64.0
Hma1.2p1_0046F.1_g026830 Hydrangea macrophylla HOM05D004617 ORTHO05D005531 5.3e-91 338.6 320 59.4
Peaxi162Scf00089g01634 Petunia axillaris HOM05D004617 ORTHO05D005531 1.2e-90 337.4 302 60.9
MSTRG.11480 Avicennia marina HOM05D004617 ORTHO05D005531 1.7e-89 333.6 303 60.7
MSTRG.23154 Avicennia marina HOM05D004617 ORTHO05D005531 1.4e-88 330.5 302 60.6
Sopen06g027890 Solanum pennellii HOM05D004617 ORTHO05D005531 2.5e-88 329.7 303 60.1
Lj9A445T80 Lonicera japonica HOM05D004617 ORTHO05D005531 4.6e-87 325.5 366 52.5
Solyc06g071600.3 Solanum lycopersicum HOM05D004617 ORTHO05D005531 4.6e-87 325.5 303 59.1
PGSC0003DMG400027080 Solanum tuberosum HOM05D004617 ORTHO05D005531 6.1e-87 325.1 304 59.5
DCAR_021575 Daucus carota HOM05D004617 ORTHO05D005531 8.2e-84 314.7 303 58.4
TWI39G0523 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 1.2e-82 310.8 327 55.7
ECA246G2887 Erigeron canadensis HOM05D004617 ORTHO05D005531 4.5e-82 308.9 303 55.4
Duzib205G1820 Durio zibethinus HOM05D004617 ORTHO05D005531 1.7e-81 307.0 326 56.7
COL.COLO4_30121 Corchorus olitorius HOM05D004617 ORTHO05D005531 2.5e-80 303.1 279 60.9
CAN.G993.37 Capsicum annuum HOM05D004617 ORTHO05D005531 1.6e-79 300.4 312 54.8
Thecc.03G024100 Theobroma cacao HOM05D004617 ORTHO05D005531 2.7e-79 299.7 325 54.2
Lj5A127T55 Lonicera japonica HOM05D004617 ORTHO05D005531 3.6e-79 299.3 244 66.4
HanXRQChr05g0154591 Helianthus annuus HOM05D004617 ORTHO05D005531 4.6e-79 298.9 303 56.1
Lsat_1_v5_gn_5_15901 Lactuca sativa HOM05D004617 ORTHO05D005531 4.6e-79 298.9 304 56.9
Haze_07552 Corylus avellana HOM05D004617 ORTHO05D005531 1.4e-78 297.4 325 53.8
Ciclev10020950m.g Citrus clementina HOM05D004617 ORTHO05D005531 1.8e-78 297.0 332 53.3
Actinidia19118 Actinidia chinensis HOM05D004617 ORTHO05D005531 1.5e-77 293.9 231 65.8
CiPaw.12G028900 Carya illinoinensis HOM05D004617 ORTHO05D005531 2.0e-77 293.5 304 55.9
Atru.chr9.2539 Acer truncatum HOM05D004617 ORTHO05D005531 7.4e-77 291.6 331 52.0
PGR044G1277 Punica granatum HOM05D004617 ORTHO05D005531 7.4e-77 291.6 302 54.3
Sc04g0001670 Simmondsia chinensis HOM05D004617 ORTHO05D005531 1.3e-76 290.8 302 52.3
MD06G1170100 Malus domestica HOM05D004617 ORTHO05D005531 3.7e-76 289.3 305 55.7
Nitab4.5_0003918g0030 Nicotiana tabacum HOM05D004617 ORTHO05D005531 3.7e-76 289.3 302 52.3
SGA_v2.0_scaffold90G27877 Striga asiatica HOM05D004617 ORTHO05D005531 3.7e-76 289.3 303 55.4
Nn4g22667 Nelumbo nucifera HOM05D004617 ORTHO05D005531 8.2e-76 288.1 282 59.9
Cpa.g.sc153.19 Carica papaya HOM05D004617 ORTHO05D005531 4.1e-75 285.8 296 54.4
Manes.06G108000 Manihot esculenta HOM05D004617 ORTHO05D005531 1.2e-74 284.3 302 54.3
Hund09456 Selenicereus undatus HOM05D004617 ORTHO05D005531 2.0e-74 283.5 301 53.8
Potri.015G080900 Populus trichocarpa HOM05D004617 ORTHO05D005531 3.4e-74 282.7 302 52.6
Gohir.A12G272900 Gossypium hirsutum HOM05D004617 ORTHO05D005531 4.5e-74 282.3 303 54.8
MD14G1175700 Malus domestica HOM05D004617 ORTHO05D005531 1.7e-73 280.4 305 55.1
Gorai.008G294000 Gossypium raimondii HOM05D004617 ORTHO05D005531 2.9e-73 279.6 303 54.8
Gohir.D12G273600 Gossypium hirsutum HOM05D004617 ORTHO05D005531 1.4e-72 277.3 303 54.1
RcHm_v2.0_Chr7g0193001 Rosa chinensis HOM05D004617 ORTHO05D005531 2.5e-72 276.6 306 52.6
Potri.T124408 Populus trichocarpa HOM05D004617 ORTHO05D005531 4.2e-72 275.8 303 52.1
Sc12g0005180 Simmondsia chinensis HOM05D004617 ORTHO05D005531 7.2e-72 275.0 329 48.9
CiPaw.11G022700 Carya illinoinensis HOM05D004617 ORTHO05D005531 1.4e-70 270.8 303 53.5
PSO478G3702 Papaver somniferum HOM05D004617 ORTHO05D005531 1.8e-70 270.4 298 53.4
Potri.012G088000 Populus trichocarpa HOM05D004617 ORTHO05D005531 1.8e-70 270.4 299 51.2
Gohir.A09G172500 Gossypium hirsutum HOM05D004617 ORTHO05D005531 3.9e-70 269.2 278 55.0
TWI23G0363 Tripterygium wilfordii HOM05D004617 ORTHO05D005531 8.8e-70 268.1 312 52.6
CANSAT80G0933 Cannabis sativa HOM05D004617 ORTHO05D005531 2.6e-69 266.5 304 51.3
QL10p008526 Quercus lobata HOM05D004617 ORTHO05D005531 7.4e-69 265.0 310 51.6
arahy.Tifrunner.gnm1.ann1.B97T9I Arachis hypogaea HOM05D004617 ORTHO05D005531 9.7e-69 264.6 301 48.5
Eucgr.K02817 Eucalyptus grandis HOM05D004617 ORTHO05D005531 1.3e-68 264.2 328 50.3
arahy.Tifrunner.gnm1.ann1.P4R84V Arachis hypogaea HOM05D004617 ORTHO05D005531 2.8e-68 263.1 301 48.5
Lalb_Chr23g0273321 Lupinus albus HOM05D004617 ORTHO05D005531 2.8e-68 263.1 296 50.0
QL10p008663 Quercus lobata HOM05D004617 ORTHO05D005531 2.8e-68 263.1 309 51.8
Gorai.006G189800 Gossypium raimondii HOM05D004617 ORTHO05D005531 4.8e-68 262.3 278 54.3
PSO017G2275 Papaver somniferum HOM05D004617 ORTHO05D005531 8.2e-68 261.5 301 51.2
Sed0022669 Sechium edule HOM05D004617 ORTHO05D005531 1.1e-67 261.2 305 50.8
FAN05G0977 Fragaria x ananassa HOM05D004617 ORTHO05D005531 3.5e-66 256.1 306 49.7
Glyma.05G040000 Glycine max HOM05D004617 ORTHO05D005531 1.0e-65 254.6 298 48.3
MELO3C026277.2 Cucumis melo HOM05D004617 ORTHO05D005531 1.7e-65 253.8 304 49.7
CsaV3_1G001290 Cucumis sativus L. HOM05D004617 ORTHO05D005531 1.7e-65 253.8 303 49.2
AUR62029851 Chenopodium quinoa HOM05D004617 ORTHO05D005531 6.5e-65 251.9 300 50.3
MBI16_g23858_MAGBIO Magnolia biondii HOM05D004617 ORTHO05D005531 6.5e-65 251.9 307 51.1
FvH4_6g24101 Fragaria vesca HOM05D004617 ORTHO05D005531 1.9e-64 250.4 306 49.0
SalBow5G0770 Salvia bowleyana HOM05D004617 ORTHO05D005531 1.9e-64 250.4 252 55.2
FvH4_5g05820 Fragaria vesca HOM05D004617 ORTHO05D005531 3.2e-64 249.6 302 50.3
SalBow5G2990 Salvia bowleyana HOM05D004617 ORTHO05D005531 9.4e-64 248.1 239 57.3
Aqoxy3G01097 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 1.2e-63 247.7 303 48.2
THA.LOC104818211 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 3.6e-63 246.1 305 49.2
VMungo1215G2409 Vigna mungo HOM05D004617 ORTHO05D005531 1.0e-62 244.6 299 46.2
ClCG06G017200 Citrullus lanatus HOM05D004617 ORTHO05D005531 3.0e-62 243.0 303 48.8
FAN08G0972 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.1e-61 241.1 302 49.7
EL10Ac5g10692 Beta vulgaris HOM05D004617 ORTHO05D005531 2.6e-61 240.0 223 57.8
Prupe.5G169600 Prunus persica HOM05D004617 ORTHO05D005531 2.6e-61 240.0 305 50.5
Lj4g0013782 Lotus japonicus HOM05D004617 ORTHO05D005531 3.3e-61 239.6 299 46.2
Aa31LG4G16830 Aethionema arabicum HOM05D004617 ORTHO05D005531 4.4e-61 239.2 303 44.9
Phvul.009G175700 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 1.7e-60 237.3 298 43.6
Phvul.003G203200 Phaseolus vulgaris HOM05D004617 ORTHO05D005531 2.8e-60 236.5 301 46.5
Sabra12G0062800 Salix brachista HOM05D004617 ORTHO05D005531 4.8e-60 235.7 348 44.0
DCAR_004467 Daucus carota HOM05D004617 ORTHO05D005531 8.2e-60 235.0 224 57.6
Sabra15G0104900 Salix brachista HOM05D004617 ORTHO05D005531 3.1e-59 233.0 351 42.7
FAN18G1615 Fragaria x ananassa HOM05D004617 ORTHO05D005531 5.3e-59 232.3 224 55.8
FAN13G0632 Fragaria x ananassa HOM05D004617 ORTHO05D005531 1.6e-58 230.7 248 52.0
AUR62028750 Chenopodium quinoa HOM05D004617 ORTHO05D005531 2.0e-58 230.3 264 50.0
THA.LOC104798968 Tarenaya hassleriana HOM05D004617 ORTHO05D005531 2.7e-58 229.9 273 47.3
AUR62008173 Chenopodium quinoa HOM05D004617 ORTHO05D005531 4.2e-56 222.6 249 50.6
AT3G48210 Arabidopsis thaliana HOM05D004617 ORTHO05D005531 7.2e-56 221.9 303 42.6
CARHR156970 Cardamine hirsuta HOM05D004617 ORTHO05D005531 7.2e-56 221.9 303 42.9
Carub.0005s1437 Capsella rubella HOM05D004617 ORTHO05D005531 9.4e-56 221.5 304 42.8
AL5G27600 Arabidopsis lyrata HOM05D004617 ORTHO05D005531 1.2e-55 221.1 303 42.6
Ca_21946_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 4.7e-55 219.2 317 42.3
C03p66610 Brassica napus HOM05D004617 ORTHO05D005531 6.1e-55 218.8 304 40.8
BolC3t18931H Brassica oleracea HOM05D004617 ORTHO05D005531 8.0e-55 218.4 304 40.8
VMungo1309G0654 Vigna mungo HOM05D004617 ORTHO05D005531 8.0e-55 218.4 319 41.7
BcaC01g02324 Brassica carinata HOM05D004617 ORTHO05D005531 2.3e-54 216.9 303 40.6
BcaB02g10666 Brassica carinata HOM05D004617 ORTHO05D005531 8.8e-54 214.9 303 41.9
Sp5g13810 Schrenkiella parvula HOM05D004617 ORTHO05D005531 1.2e-53 214.5 303 40.9
Thhalv10010559m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 7.5e-53 211.8 303 40.6
TPR.G37539 Trifolium pratense HOM05D004617 ORTHO05D005531 2.2e-52 210.3 296 43.2
Gohir.D09G168200 Gossypium hirsutum HOM05D004617 ORTHO05D005531 8.3e-52 208.4 278 47.8
Psat4g059160 Pisum sativum HOM05D004617 ORTHO05D005531 8.3e-52 208.4 289 42.2
TAR371G0263 Trochodendron aralioides HOM05D004617 ORTHO05D005531 8.3e-52 208.4 183 61.2
BraA06t25690Z Brassica rapa HOM05D004617 ORTHO05D005531 1.4e-51 207.6 305 40.0
A06p27500 Brassica napus HOM05D004617 ORTHO05D005531 1.8e-51 207.2 305 39.7
unitig_0.g2533 Utricularia gibba HOM05D004617 ORTHO05D005531 2.4e-51 206.8 252 49.2
Ca_29672_v3 Cicer arietinum L. HOM05D004617 ORTHO05D005531 2.7e-50 203.4 279 43.4
ATR1152G034 Amborella trichopoda HOM05D004617 ORTHO05D005531 3.8e-49 199.5 244 46.3
Cpa.g.sc153.20 Carica papaya HOM05D004617 ORTHO05D005531 8.5e-49 198.4 195 54.4
Medtr4g105330 Medicago truncatula HOM05D004617 ORTHO05D005531 7.2e-48 195.3 294 40.8
Thhalv10010553m.g Eutrema salsugineum HOM05D004617 ORTHO05D005531 2.3e-46 190.3 303 38.0
Os05g0110700 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 1.5e-45 187.6 306 40.8
CDE05G2613 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 2.4e-43 180.3 205 48.3
HPP92_011588 Vanilla planifolia HOM05D004617 ORTHO05D005531 9.5e-40 168.3 307 39.4
Os01g0973200 Oryza sativa ssp. japonica HOM05D004617 ORTHO05D005531 3.0e-38 163.3 303 36.6
CDE02G4133 Ceratophyllum demersum HOM05D004617 ORTHO05D005531 8.9e-38 161.8 225 45.3
FAN02G3554 Fragaria x ananassa HOM05D004617 ORTHO05D005531 2.9e-36 156.8 137 56.2
Psat4g095560 Pisum sativum HOM05D004617 ORTHO05D005531 2.7e-34 150.2 319 33.9
SEGI_25965 Sequoiadendron giganteum HOM05D004617 ORTHO05D005531 3.0e-33 146.7 218 39.4
Zm00001eb139780 Zea mays HOM05D004617 ORTHO05D005531 2.3e-30 137.1 225 36.9
Zm00001eb362200 Zea mays HOM05D004617 ORTHO05D005531 7.0e-27 125.6 265 34.7
Glyma.04G186200 Glycine max HOM05D004617 ORTHO05D005531 2.7e-26 123.6 160 40.0
BcaC07g39309 Brassica carinata HOM05D004617 ORTHO05D005531 4.7e-23 112.8 187 36.4
arahy.Tifrunner.gnm1.ann1.H09BLY Arachis hypogaea HOM05D004617 ORTHO05D005531 1.1e-22 111.7 149 41.6
Zm00001eb355840 Zea mays HOM05D004617 ORTHO05D005531 2.0e-21 107.5 218 32.6
Aqoxy5G01948 Aquilegia oxysepala HOM05D004617 ORTHO05D005531 4.4e-21 106.3 168 38.1
Glyma.06G179933 Glycine max HOM05D004617 ORTHO05D005531 2.2e-20 104.0 135 42.2
A06p19470 Brassica napus HOM05D004617 ORTHO05D005531 4.1e-19 99.8 229 31.0
BraA06t25026Z Brassica rapa HOM05D004617 ORTHO05D005531 1.6e-18 97.8 224 31.2
vmacro20892 Vaccinium macrocarpon HOM05D000448 ORTHO05D000291 4.6e-18 96.3 69 69.6
C08p23230 Brassica napus HOM05D004617 ORTHO05D005531 3.0e-17 93.6 180 32.2
Mapoly0029s0121 Marchantia polymorpha HOM05D004617 ORTHO05D005531 2.1e-15 87.4 191 30.9
Atru.chr9.2524 Acer truncatum HOM05D004617 ORTHO05D005531 6.2e-15 85.9 97 56.7
SMO200G0114 Selaginella moellendorffii HOM05D004617 ORTHO05D005531 2.2e-12 77.4 111 36.9
Pp3c3_37370 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.1e-11 75.1 183 27.3
Pp3c8_1270 Physcomitrium patens HOM05D004617 ORTHO05D005531 1.9e-11 74.3 173 25.4
Glyma.17G086900 Glycine max HOM05D004617 ORTHO05D005531 7.1e-11 72.4 66 59.1
arahy.Tifrunner.gnm1.ann1.8UC028 Arachis hypogaea HOM05D004617 ORTHO05D005531 2.7e-10 70.5 103 43.7
PRCOL_00005442 Prasinoderma coloniale HOM05D004617 ORTHO05D005531 8.6e-09 65.5 113 31.9


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