Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 4.8e-158 561.2 303 100.0
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.3e-99 367.1 305 72.5
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 1.7e-99 366.7 307 69.1
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 2.9e-99 365.9 307 69.1
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 4.0e-96 355.5 297 70.4
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 6.8e-96 354.8 304 63.8
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 6.8e-96 354.8 305 63.6
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 8.8e-96 354.4 304 72.4
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 1.2e-95 354.0 296 65.9
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 1.5e-95 353.6 302 68.5
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 3.4e-95 352.4 302 66.6
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 3.4e-95 352.4 306 68.0
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 1.3e-94 350.5 304 66.8
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 2.2e-94 349.7 302 67.9
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 2.8e-94 349.4 304 66.4
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 8.3e-94 347.8 304 66.1
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 8.3e-94 347.8 306 69.3
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 2.4e-93 346.3 221 79.2
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 9.2e-93 344.4 306 63.7
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 9.2e-93 344.4 304 69.7
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 1.2e-92 344.0 303 70.3
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 3.5e-92 342.4 303 69.3
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 1.3e-91 340.5 303 69.0
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 2.9e-91 339.3 310 67.1
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 2.9e-91 339.3 253 72.3
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 1.9e-90 336.7 253 77.9
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 2.5e-90 336.3 306 68.0
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 3.3e-90 335.9 310 60.3
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 3.3e-90 335.9 330 57.9
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 4.3e-90 335.5 303 68.6
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 9.5e-90 334.3 304 60.9
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 1.6e-89 333.6 304 65.1
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 1.6e-89 333.6 279 66.7
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 3.6e-89 332.4 216 75.5
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 8.0e-89 331.3 256 75.0
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.8e-88 330.1 247 72.5
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 4.0e-88 328.9 305 58.4
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 1.2e-87 327.4 276 70.7
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 2.0e-87 326.6 303 65.3
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 1.3e-86 323.9 325 63.7
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 3.7e-86 322.4 259 66.8
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 8.3e-86 321.2 307 64.5
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 1.1e-85 320.9 307 65.8
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 1.8e-85 320.1 299 60.2
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 5.4e-85 318.5 250 70.4
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 7.0e-85 318.2 273 64.1
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 9.2e-85 317.8 303 64.0
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 1.2e-84 317.4 252 72.6
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 2.0e-84 316.6 308 65.3
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 2.7e-84 316.2 245 68.2
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 3.5e-84 315.8 240 69.2
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 4.6e-84 315.5 252 75.8
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 5.9e-84 315.1 300 63.0
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 5.9e-84 315.1 311 63.0
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 1.3e-83 313.9 249 72.7
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 1.3e-83 313.9 303 63.7
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.3e-83 313.9 303 66.3
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 1.7e-83 313.5 249 73.1
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 1.7e-83 313.5 303 63.4
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 3.0e-83 312.8 212 74.1
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 5.0e-83 312.0 303 66.3
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 8.6e-83 311.2 272 68.8
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 2.1e-81 306.6 244 67.2
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 2.8e-81 306.2 254 65.4
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 3.6e-81 305.8 248 72.2
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.7e-81 305.4 304 58.6
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 4.7e-81 305.4 297 63.3
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 4.7e-81 305.4 297 63.3
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 2.3e-80 303.1 216 77.3
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 4.0e-80 302.4 297 63.0
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 4.0e-80 302.4 261 67.0
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 6.8e-80 301.6 245 71.4
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 1.2e-79 300.8 314 60.8
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 1.5e-79 300.4 252 64.3
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 2.0e-79 300.1 260 66.2
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 2.6e-79 299.7 311 55.0
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 7.5e-79 298.1 245 64.9
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 6.4e-78 295.0 213 68.1
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 1.4e-77 293.9 307 54.4
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 2.4e-77 293.1 218 67.9
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.6e-76 290.4 192 76.6
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 1.6e-76 290.4 257 59.5
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 6.0e-76 288.5 266 65.4
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 3.0e-75 286.2 304 54.3
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 3.9e-75 285.8 303 61.1
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 1.5e-74 283.9 260 63.5
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 1.5e-74 283.9 267 59.6
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.9e-74 283.5 194 71.6
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 9.5e-74 281.2 261 57.9
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 1.4e-72 277.3 213 70.4
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 3.1e-72 276.2 230 71.3
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 5.2e-72 275.4 278 57.6
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 4.4e-71 272.3 209 68.9
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 5.8e-71 271.9 260 62.3
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 3.2e-69 266.2 209 65.1
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 1.7e-67 260.4 213 63.4
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 2.3e-67 260.0 255 54.9
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 6.6e-67 258.5 144 84.0
Dinv38575 Davidia involucrata HOM05D006234 ORTHO05D007813 7.3e-66 255.0 243 67.9
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 2.4e-64 250.0 266 55.3
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 4.0e-64 249.2 323 46.1
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 5.2e-64 248.8 305 56.1
arahy.Tifrunner.gnm1.ann1.68I129 Arachis hypogaea HOM05D006234 ORTHO05D007813 1.2e-60 237.7 255 52.2
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 1.1e-58 231.1 120 90.8
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 3.3e-50 203.0 283 50.2
Prupe.5G172000 Prunus persica HOM05D006234 ORTHO05D007813 1.4e-48 197.6 241 56.0
SalBow1G2571 Salvia bowleyana HOM05D006234 ORTHO05D007813 2.1e-44 183.7 153 65.4
Aqoxy6G01962 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.9e-37 160.6 134 61.2
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 4.5e-31 139.4 176 42.6
Cre16.g650500 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 4.6e-28 129.4 200 48.0
SalBow8G5646 Salvia bowleyana HOM05D006234 ORTHO05D007813 3.9e-27 126.3 179 44.7
DCAR_026145 Daucus carota HOM05D007767 ORTHO05D010057 5.7e-26 122.5 177 59.9
Solyc12g021360.3 Solanum lycopersicum HOM05D006234 ORTHO05D007813 1.3e-22 111.3 110 60.0
Lalb_Chr08g0236591 Lupinus albus HOM05D006234 ORTHO05D007813 2.9e-22 110.2 70 75.7
Ca_21933_v3 Cicer arietinum L. HOM05D000957 ORTHO05D000754 2.1e-20 104.0 118 55.1
Psat5g000720 Pisum sativum HOM05D006234 ORTHO05D007813 2.7e-20 103.6 123 50.4
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 6.7e-19 99.0 133 40.6
SalBow1G3204 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.1e-18 98.2 75 68.0
Actinidia19102 Actinidia chinensis HOM05D006234 ORTHO05D007813 5.7e-18 95.9 132 49.2
ATR1091G013 Amborella trichopoda HOM05D006234 ORTHO05D007813 4.5e-15 86.3 130 42.3
arahy.Tifrunner.gnm1.ann1.AH97YV Arachis hypogaea HOM05D006234 ORTHO05D007813 7.7e-15 85.5 55 72.7
PRCOL_00003688 Prasinoderma coloniale HOM05D001043 ORTHO05D006432 1.0e-14 85.1 105 42.9
Lalb_Chr08g0236581 Lupinus albus HOM05D006234 ORTHO05D007813 7.9e-12 75.5 100 48.0
Manes.11G123700 Manihot esculenta HOM05D001043 ORTHO05D006432 1.3e-09 68.2 137 36.5
FvH4_4g10900 Fragaria vesca HOM05D001043 ORTHO05D006432 4.8e-09 66.2 137 35.8
FAN12G0575 Fragaria x ananassa HOM05D001043 ORTHO05D006432 6.3e-09 65.9 137 35.8
CSS0016711 Camellia sinensis var. sinensis HOM05D001043 ORTHO05D006432 8.2e-09 65.5 158 35.4
ECA240G3866 Erigeron canadensis HOM05D001043 ORTHO05D006432 1.2e-07 61.6 138 33.3
Thecc.04G175400 Theobroma cacao HOM05D001043 ORTHO05D006432 1.5e-07 61.2 137 34.3
FAN07G1629 Fragaria x ananassa HOM05D001043 ORTHO05D006432 2.6e-07 60.5 146 32.9
FAN17G1903 Fragaria x ananassa HOM05D001043 ORTHO05D006432 2.6e-07 60.5 112 34.8
MBI07_g18520_MAGBIO Magnolia biondii HOM05D001043 ORTHO05D006432 3.4e-07 60.1 137 32.8
SalBow3G0890 Salvia bowleyana HOM05D001251 ORTHO05D007813 3.4e-07 60.1 30 93.3
Medtr4g068130 Medicago truncatula HOM05D001043 ORTHO05D006432 4.5e-07 59.7 137 35.0
PGR142G0751 Punica granatum HOM05D001043 ORTHO05D006432 5.9e-07 59.3 145 34.5
RcHm_v2.0_Chr6g0279701 Rosa chinensis HOM05D006234 ORTHO05D007813 5.9e-07 59.3 53 62.3
CiPaw.01G096300 Carya illinoinensis HOM05D001043 ORTHO05D006432 2.2e-06 57.4 101 36.6
Sabra07G0106300 Salix brachista HOM05D001043 ORTHO05D006432 2.9e-06 57.0 112 33.0
Cpa.g.sc685.1 Carica papaya HOM05D006234 ORTHO05D007813 3.8e-06 56.6 116 41.4
PGR142G3303 Punica granatum HOM05D001043 ORTHO05D006432 3.8e-06 56.6 140 32.1
HanXRQChr03g0092911 Helianthus annuus HOM05D001043 ORTHO05D006432 5.0e-06 56.2 137 32.1
Glyma.12G051100 Glycine max HOM05D001043 ORTHO05D006432 8.5e-06 55.5 112 36.6
Potri.007G130900 Populus trichocarpa HOM05D001043 ORTHO05D006432 8.5e-06 55.5 112 33.0


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