Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 1.7e-276 955.3 466 100.0
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 2.7e-253 878.2 462 93.9
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 4.9e-178 628.2 421 71.7
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 7.1e-177 624.4 393 74.3
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 2.1e-176 622.9 420 72.1
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 2.7e-176 622.5 401 72.8
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 7.8e-176 620.9 385 74.3
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 7.8e-176 620.9 384 76.6
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 6.6e-175 617.8 455 66.6
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 8.6e-175 617.5 394 73.4
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 2.5e-174 615.9 416 71.2
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 3.3e-174 615.5 385 73.5
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 9.5e-174 614.0 394 73.1
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 1.6e-173 613.2 394 71.6
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.6e-173 613.2 394 73.1
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 2.1e-173 612.8 464 66.6
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 3.6e-173 612.1 451 66.3
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 4.7e-173 611.7 385 73.2
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 1.1e-172 610.5 421 70.5
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 1.4e-172 610.1 394 72.1
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 1.4e-172 610.1 446 66.8
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 1.4e-172 610.1 437 67.7
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 1.8e-172 609.8 396 71.7
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 4.0e-172 608.6 381 76.4
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 2.0e-171 606.3 392 74.0
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.0e-171 606.3 448 65.8
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 7.6e-171 604.4 394 71.3
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 8.3e-170 600.9 386 73.1
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 1.1e-169 600.5 385 71.9
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 1.4e-169 600.1 386 72.0
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 1.4e-169 600.1 355 77.7
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 2.4e-169 599.4 391 70.3
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 4.1e-169 598.6 479 63.7
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 9.2e-169 597.4 466 64.6
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.2e-168 597.0 425 67.5
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 1.2e-168 597.0 395 69.9
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 1.1e-166 590.5 436 67.4
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 5.6e-166 588.2 395 70.6
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 7.3e-166 587.8 397 69.8
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 9.6e-166 587.4 425 66.8
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 1.6e-165 586.6 403 67.7
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 8.1e-165 584.3 403 70.2
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.4e-164 583.6 428 65.7
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 1.4e-164 583.6 389 69.7
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 2.4e-164 582.8 395 70.4
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 4.0e-164 582.0 389 68.4
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 4.0e-164 582.0 403 69.7
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 6.8e-164 581.3 387 71.3
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 1.5e-163 580.1 404 67.3
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 4.4e-163 578.6 387 69.3
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 5.8e-163 578.2 468 60.3
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 3.8e-162 575.5 393 69.2
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 3.8e-162 575.5 393 69.2
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 4.9e-162 575.1 389 70.4
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 1.1e-161 573.9 388 69.8
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 1.4e-161 573.5 339 76.7
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 4.2e-161 572.0 378 69.6
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 1.6e-160 570.1 417 65.2
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 1.6e-160 570.1 385 70.4
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 2.7e-160 569.3 379 70.7
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 6.0e-160 568.2 393 68.7
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 6.0e-160 568.2 393 68.7
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 1.7e-159 566.6 393 68.2
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 3.9e-159 565.5 392 67.6
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 4.3e-158 562.0 392 68.1
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 5.6e-158 561.6 385 68.8
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 9.6e-158 560.8 392 67.6
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 1.3e-157 560.5 357 73.9
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 3.1e-156 555.8 380 68.2
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 9.0e-156 554.3 389 65.8
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 3.4e-155 552.4 389 67.6
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 7.6e-155 551.2 339 74.0
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 1.3e-154 550.4 455 60.4
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 2.9e-154 549.3 407 63.9
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 2.9e-154 549.3 380 67.1
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 3.8e-154 548.9 434 60.6
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 4.9e-154 548.5 442 64.3
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 1.4e-153 547.0 339 74.0
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 2.4e-153 546.2 391 67.3
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 9.3e-153 544.3 391 66.2
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 3.5e-152 542.3 322 76.7
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 6.0e-152 541.6 391 65.5
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 1.3e-151 540.4 392 66.3
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.3e-149 533.9 383 65.5
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 1.6e-149 533.5 391 65.5
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 2.1e-149 533.1 388 64.2
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 2.8e-149 532.7 396 64.1
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 4.0e-148 528.9 436 61.0
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 1.2e-147 527.3 391 65.0
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 7.6e-147 524.6 355 66.2
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 2.2e-146 523.1 388 60.1
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 3.8e-146 522.3 340 72.4
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 1.6e-144 516.9 414 58.7
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 2.5e-142 509.6 340 70.6
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 7.4e-142 508.1 339 69.0
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 1.3e-133 480.7 353 64.3
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 6.3e-117 425.2 383 52.2
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 1.7e-114 417.2 377 59.2
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 1.0e-111 407.9 375 51.7
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 5.1e-111 405.6 409 49.4
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 2.9e-106 389.8 450 43.3
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 1.5e-105 387.5 491 46.2
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 7.5e-102 375.2 339 55.5
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 2.0e-99 367.1 441 49.0
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 5.9e-99 365.5 336 55.1
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 3.6e-88 329.7 235 67.2
Cre09.g388060 Chlamydomonas reinhardtii HOM05D006367 ORTHO05D007942 1.5e-81 307.8 404 41.3
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 9.5e-73 278.5 218 63.8
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 4.7e-72 276.2 379 37.7
MCO11G553 Micromonas commoda HOM05D006367 ORTHO05D007942 4.1e-68 263.1 369 37.4
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 1.5e-65 254.6 223 57.8
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 2.1e-64 250.8 232 56.9
PGSC0003DMG400031203 Solanum tuberosum HOM05D006367 ORTHO05D007942 8.6e-58 228.8 118 83.9
PRCOL_00006729 Prasinoderma coloniale HOM05D006367 ORTHO05D007942 3.1e-55 220.3 390 34.9
Glyma.08G142950 Glycine max HOM05D006367 ORTHO05D007942 1.6e-48 198.0 105 81.9
Aqoxy4G01385 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 1.2e-38 165.2 92 77.2
Aqoxy4G01201 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 9.9e-38 162.2 92 76.1
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 2.5e-33 147.5 141 55.3
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.5e-25 120.9 178 39.9
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 7.1e-20 102.8 138 46.4
Haze_24492 Corylus avellana HOM05D001078 ORTHO05D000927 2.5e-12 77.8 57 71.9
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 2.7e-11 74.3 70 55.7
CARHR293120 Cardamine hirsuta HOM05D006367 ORTHO05D007942 3.6e-11 73.9 89 44.9
arahy.Tifrunner.gnm1.ann1.ZGZX3T Arachis hypogaea HOM05D006573 ORTHO05D008073 4.6e-11 73.6 132 25.8
VMungo0540G0667 Vigna mungo HOM05D006573 ORTHO05D008073 6.1e-11 73.2 160 25.6
Ca_09476_v3 Cicer arietinum L. HOM05D006573 ORTHO05D008073 1.3e-10 72.0 132 25.0
Psat3g005000 Pisum sativum HOM05D006573 ORTHO05D008073 1.3e-10 72.0 158 24.7
Glyma.19G251000 Glycine max HOM05D006573 ORTHO05D008073 2.3e-10 71.2 184 23.4
Phvul.006G108200 Phaseolus vulgaris HOM05D006573 ORTHO05D008073 2.3e-10 71.2 160 25.0
arahy.Tifrunner.gnm1.ann1.L0KK3Q Arachis hypogaea HOM05D006573 ORTHO05D008073 3.9e-10 70.5 132 25.0
Glyma.03G253500 Glycine max HOM05D006573 ORTHO05D008073 3.9e-10 70.5 230 23.0
Medtr7g116630 Medicago truncatula HOM05D006573 ORTHO05D008073 5.1e-10 70.1 158 24.1
SalBow1G0293 Salvia bowleyana HOM05D006573 ORTHO05D008073 5.1e-10 70.1 132 24.2
SalBow1G2715 Salvia bowleyana HOM05D006573 ORTHO05D008073 5.1e-10 70.1 132 24.2
TPR.G4727 Trifolium pratense HOM05D006573 ORTHO05D008073 5.1e-10 70.1 158 24.1
Zm00001eb085840 Zea mays HOM05D006573 ORTHO05D008073 8.7e-10 69.3 132 24.2
Dinv19279 Davidia involucrata HOM05D006573 ORTHO05D008073 3.3e-09 67.4 218 21.6
ATR0069G016 Amborella trichopoda HOM05D006573 ORTHO05D008073 5.7e-09 66.6 160 23.8
MCO16G084 Micromonas commoda HOM05D006573 ORTHO05D008073 9.7e-09 65.9 136 27.9
Lalb_Chr18g0044221 Lupinus albus HOM05D006573 ORTHO05D008073 1.3e-08 65.5 174 24.7
Pp3c3_13220 Physcomitrium patens HOM05D006573 ORTHO05D008073 2.2e-08 64.7 165 24.2
SEGI_03231 Sequoiadendron giganteum HOM05D006573 ORTHO05D008073 3.7e-08 63.9 137 23.4
CBR_g38554 Chara braunii HOM05D006573 ORTHO05D008073 4.8e-08 63.5 137 26.3
AagrBONN_evm.TU.Sc2ySwM_228.1660 Anthoceros agrestis HOM05D006573 ORTHO05D008073 6.3e-08 63.2 133 26.3
CARHR034070 Cardamine hirsuta HOM05D006367 ORTHO05D007942 8.2e-08 62.8 170 30.6
Mapoly0111s0023 Marchantia polymorpha HOM05D006573 ORTHO05D008073 1.5e-06 58.5 158 23.4


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