Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 6.3e-296 1020.0 513 100.0
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 1.5e-172 610.1 514 60.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 1.3e-171 607.1 512 60.9
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 6.0e-169 598.2 512 60.0
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 4.3e-167 592.0 512 59.8
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 2.8e-166 589.3 511 58.5
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 2.3e-165 586.3 511 58.5
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 3.1e-165 585.9 513 57.9
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 5.2e-165 585.1 529 56.5
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 2.0e-164 583.2 514 58.2
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 5.8e-164 581.6 511 58.7
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 9.8e-164 580.9 511 58.9
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 6.2e-158 561.6 514 57.0
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 1.4e-157 560.5 512 57.0
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 2.2e-155 553.1 514 56.0
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.9e-155 552.7 438 63.2
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.9e-155 552.7 514 56.0
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 3.7e-155 552.4 493 58.0
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 9.2e-154 547.7 510 54.5
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 2.1e-153 546.6 515 54.4
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 2.1e-153 546.6 498 57.6
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 3.5e-153 545.8 510 54.5
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 4.6e-153 545.4 513 54.6
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 2.3e-152 543.1 504 56.9
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-152 541.6 514 55.4
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 6.6e-152 541.6 514 55.4
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 6.6e-152 541.6 512 55.5
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 1.3e-147 527.3 511 54.0
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 2.2e-147 526.6 513 52.4
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 2.9e-147 526.2 510 52.9
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 4.9e-147 525.4 494 56.1
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 6.4e-147 525.0 514 54.1
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.9e-146 523.5 514 53.5
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 3.5e-145 519.2 512 53.1
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 7.8e-145 518.1 512 52.9
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 1.3e-144 517.3 519 52.0
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 1.7e-144 516.9 512 53.1
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 2.3e-144 516.5 512 53.1
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 8.7e-144 514.6 512 52.5
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 5.6e-143 511.9 512 51.4
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 9.6e-143 511.1 509 50.3
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.6e-142 510.4 510 52.0
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 8.1e-142 508.1 526 52.7
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 8.1e-142 508.1 512 51.2
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 1.1e-141 507.7 513 52.2
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.3e-141 505.4 507 52.3
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 1.7e-139 500.4 509 50.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 1.7e-139 500.4 514 52.3
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 3.8e-139 499.2 512 50.6
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 8.4e-139 498.0 511 50.9
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.1e-138 497.7 493 53.3
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 1.7e-136 490.3 512 49.6
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 1.5e-135 487.3 495 52.3
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 1.5e-135 487.3 514 49.8
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 1.3e-134 484.2 499 51.5
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 1.4e-133 480.7 496 50.6
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 2.4e-133 479.9 493 50.7
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 2.4e-133 479.9 501 51.5
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 3.4e-132 476.1 494 50.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 7.1e-130 468.4 511 48.9
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 9.3e-130 468.0 515 50.5
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 5.6e-127 458.8 505 49.5
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 9.6e-127 458.0 498 48.4
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 2.8e-126 456.4 509 47.3
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 4.8e-126 455.7 516 48.1
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 4.8e-126 455.7 522 48.1
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 6.2e-126 455.3 516 48.4
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 1.1e-125 454.5 509 47.9
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.4e-125 454.1 514 48.2
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 2.4e-125 453.4 494 49.6
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 3.1e-125 453.0 515 48.3
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 6.9e-125 451.8 516 49.2
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 9.0e-125 451.4 515 48.2
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 4.5e-124 449.1 511 46.8
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 7.6e-124 448.4 513 48.1
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 1.0e-123 448.0 515 47.8
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 1.3e-123 447.6 510 48.0
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 1.3e-123 447.6 516 48.1
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 1.1e-122 444.5 519 47.6
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 2.5e-122 443.4 496 49.6
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 5.5e-122 442.2 512 46.3
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 4.6e-121 439.1 504 47.2
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 1.3e-120 437.6 519 46.1
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.8e-120 437.2 512 47.3
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 2.3e-120 436.8 493 49.3
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 3.9e-120 436.0 521 44.9
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 3.9e-120 436.0 495 48.3
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 5.1e-120 435.6 496 49.6
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 2.8e-118 429.9 496 46.8
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 8.2e-118 428.3 389 56.3
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 1.5e-116 424.1 509 44.4
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 5.9e-116 422.2 510 44.1
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 3.8e-115 419.5 511 44.0
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 2.3e-112 410.2 344 59.3
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.3e-111 406.4 476 46.8
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 4.3e-111 406.0 395 52.4
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 1.1e-103 381.3 490 42.9
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 1.4e-101 374.4 331 62.2
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 3.2e-98 363.2 534 38.4
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 4.2e-98 362.8 396 49.7
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.7e-97 359.4 346 55.2
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.6e-92 343.6 335 52.2
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 1.2e-84 318.2 269 59.5
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 6.1e-65 252.7 190 63.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 6.1e-65 252.7 190 63.2
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 3.4e-63 246.9 219 56.6
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 2.7e-60 237.3 532 31.2
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 9.5e-58 228.8 504 31.0
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 3.7e-54 216.9 544 29.2
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 6.4e-54 216.1 159 62.3
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 1.5e-47 194.9 505 27.9
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 5.8e-39 166.4 193 49.2
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 1.1e-37 162.2 490 27.1
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 3.4e-31 140.6 117 60.7
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 9.9e-31 139.0 175 47.4
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.9e-30 136.7 118 58.5
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 1.6e-25 121.7 118 52.5
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 3.4e-23 114.0 142 40.8
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.8e-23 113.2 142 40.8
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 1.4e-21 108.6 117 50.4
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 4.2e-21 107.1 173 37.0
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 5.6e-18 96.7 224 29.9
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.6e-17 95.1 123 44.7
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 7.4e-10 69.7 49 61.2


User provided reference genes

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