Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g10260 Coffea canephora HOM05D008121 ORTHO05D009878 2.2e-88 328.9 169 100.0
PGSC0003DMG400015199 Solanum tuberosum HOM05D008121 ORTHO05D009878 4.4e-20 102.1 172 45.9
Solyc03g110980.4 Solanum lycopersicum HOM05D008121 ORTHO05D009878 1.7e-19 100.1 170 43.5
Sopen03g030170 Solanum pennellii HOM05D008121 ORTHO05D009878 2.9e-19 99.4 171 43.9
Hma1.2p1_0014F.1_g009910 Hydrangea macrophylla HOM05D008121 ORTHO05D009878 3.2e-18 95.9 168 44.0
Migut.I00480 Erythranthe guttata HOM05D008121 ORTHO05D009878 4.6e-17 92.0 139 47.5
Nitab4.5_0005418g0010 Nicotiana tabacum HOM05D008121 ORTHO05D009878 6.0e-17 91.7 162 45.1
Nitab4.5_0005327g0050 Nicotiana tabacum HOM05D008121 ORTHO05D009878 1.0e-16 90.9 159 42.8
CAN.G352.52 Capsicum annuum HOM05D008121 ORTHO05D009878 3.9e-16 89.0 171 40.4
Oeu018378.1 Olea europaea HOM05D008121 ORTHO05D009878 3.3e-15 85.9 131 45.8
QL10p005006 Quercus lobata HOM05D008121 ORTHO05D009878 7.3e-15 84.7 194 37.6
SGA_v2.0_scaffold161G37821 Striga asiatica HOM05D008121 ORTHO05D009878 9.5e-15 84.3 145 42.1
CSS0015443 Camellia sinensis var. sinensis HOM05D008121 ORTHO05D009878 1.2e-14 84.0 171 36.8
MSTRG.22918 Avicennia marina HOM05D008121 ORTHO05D009878 2.8e-14 82.8 146 43.8
DCAR_026211 Daucus carota HOM05D008121 ORTHO05D009878 1.8e-13 80.1 146 40.4
Atru.chr9.1017 Acer truncatum HOM05D008121 ORTHO05D009878 2.3e-13 79.7 166 41.0
Dinv38465 Davidia involucrata HOM05D008121 ORTHO05D009878 3.1e-13 79.3 148 43.2
Haze_07274 Corylus avellana HOM05D008121 ORTHO05D009878 5.2e-13 78.6 189 35.4
Dinv02922 Davidia involucrata HOM05D008121 ORTHO05D009878 5.2e-13 78.6 148 43.9
HanXRQChr09g0272891 Helianthus annuus HOM05D008121 ORTHO05D009878 8.9e-13 77.8 170 40.6
RcHm_v2.0_Chr7g0190901 Rosa chinensis HOM05D008121 ORTHO05D009878 8.9e-13 77.8 193 35.2
Cfa018889 Carpinus fangiana HOM05D008121 ORTHO05D009878 1.2e-12 77.4 197 35.5
Prupe.5G156300 Prunus persica HOM05D008121 ORTHO05D009878 4.4e-12 75.5 196 35.2
CiPaw.12G036100 Carya illinoinensis HOM05D008121 ORTHO05D009878 9.9e-12 74.3 184 35.3
Actinidia25609 Actinidia chinensis HOM05D008121 ORTHO05D009878 2.2e-11 73.2 145 41.4
Duzib084G1233 Durio zibethinus HOM05D008121 ORTHO05D009878 8.3e-11 71.2 144 37.5
Potri.015G091100 Populus trichocarpa HOM05D008121 ORTHO05D009878 1.1e-10 70.9 189 34.9
ECA232G1254 Erigeron canadensis HOM05D008121 ORTHO05D009878 4.1e-10 68.9 117 41.0
FAN04G1418 Fragaria x ananassa HOM05D000290 ORTHO05D004630 7.1e-10 68.2 166 35.5
Sabra15G0113100 Salix brachista HOM05D000290 ORTHO05D004630 9.2e-10 67.8 193 34.7
CANSAT80G0868 Cannabis sativa HOM05D008121 ORTHO05D009878 1.2e-09 67.4 154 35.7
FvH4_5g07590 Fragaria vesca HOM05D008121 ORTHO05D009878 1.2e-09 67.4 193 33.7
Thecc.03G123300 Theobroma cacao HOM05D008121 ORTHO05D009878 1.2e-09 67.4 175 35.4
FAN08G2628 Fragaria x ananassa HOM05D000290 ORTHO05D004630 1.6e-09 67.0 161 36.0
MD06G1149100 Malus domestica HOM05D008121 ORTHO05D009878 1.6e-09 67.0 193 32.6
CiPaw.11G011700 Carya illinoinensis HOM05D008121 ORTHO05D009878 2.1e-09 66.6 183 32.8
Rhsim08G0185200 Rhododendron simsii HOM05D000290 ORTHO05D004630 2.7e-09 66.2 143 38.5
Manes.14G055100 Manihot esculenta HOM05D008121 ORTHO05D009878 6.0e-09 65.1 193 32.6
ClCG03G003530 Citrullus lanatus HOM05D008121 ORTHO05D009878 1.3e-08 63.9 198 36.4
vmacro19236 Vaccinium macrocarpon HOM05D008121 ORTHO05D009878 1.7e-08 63.5 138 37.7
Cpa.g.sc4.77 Carica papaya HOM05D008121 ORTHO05D009878 3.0e-08 62.8 155 36.8
TWI14G0571 Tripterygium wilfordii HOM05D008121 ORTHO05D009878 3.9e-08 62.4 196 33.2
Duzib205G1258 Durio zibethinus HOM05D008121 ORTHO05D009878 5.1e-08 62.0 175 33.1
GSVIVG01007536001 Vitis vinifera HOM05D008121 ORTHO05D009878 5.1e-08 62.0 153 34.0
Ah.15g095290 Amaranthus hybridus HOM05D001185 ORTHO05D002551 1.1e-07 60.8 125 42.4
EL10Ac7g18085 Beta vulgaris HOM05D008121 ORTHO05D009878 1.5e-07 60.5 161 38.5
COL.COLO4_03517 Corchorus olitorius HOM05D008121 ORTHO05D009878 1.9e-07 60.1 172 34.3
Gohir.D09G246100 Gossypium hirsutum HOM05D008121 ORTHO05D009878 1.9e-07 60.1 167 33.5
Gorai.006G270600 Gossypium raimondii HOM05D008121 ORTHO05D009878 1.9e-07 60.1 167 33.5
Sed0025515 Sechium edule HOM05D008121 ORTHO05D009878 1.9e-07 60.1 185 36.2
MELO3C002337.2 Cucumis melo HOM05D008121 ORTHO05D009878 2.5e-07 59.7 171 35.7
Gohir.A09G245200 Gossypium hirsutum HOM05D008121 ORTHO05D009878 9.5e-07 57.8 167 32.9
BcaC07g39334 Brassica carinata HOM05D011481 ORTHO05D009878 2.8e-06 56.2 137 38.0
C08p23500 Brassica napus HOM05D011481 ORTHO05D009878 2.8e-06 56.2 137 38.0
BolC8t49978H Brassica oleracea HOM05D011481 ORTHO05D009878 2.8e-06 56.2 137 38.0
unitig_8.g4185 Utricularia gibba HOM05D000357 ORTHO05D009878 2.8e-06 56.2 53 54.7
A06p19190 Brassica napus HOM05D011481 ORTHO05D009878 8.1e-06 54.7 130 38.5
BraA06t25002Z Brassica rapa HOM05D011481 ORTHO05D009878 8.1e-06 54.7 130 38.5
PSO384G0802 Papaver somniferum HOM05D008121 ORTHO05D009878 8.1e-06 54.7 67 50.7


User provided reference genes

Program Settings