Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g09930 Coffea canephora HOM05D005335 ORTHO05D006472 2.3e-69 265.8 172 100.0
Hma1.2p1_0014F.1_g009400 Hydrangea macrophylla HOM05D005335 ORTHO05D006472 1.9e-34 149.8 172 66.3
Dinv11173 Davidia involucrata HOM05D001420 ORTHO05D002488 6.3e-30 134.8 168 60.1
ClCG06G017900 Citrullus lanatus HOM05D005335 ORTHO05D006472 1.2e-28 130.6 175 64.6
Rhsim08G0190300 Rhododendron simsii HOM05D005335 ORTHO05D006472 2.0e-28 129.8 174 58.0
Duzib084G1383 Durio zibethinus HOM05D005335 ORTHO05D006472 2.6e-28 129.4 174 50.0
MELO3C026206.2 Cucumis melo HOM05D005335 ORTHO05D006472 5.9e-28 128.3 175 63.4
Oeu023482.1 Olea europaea HOM05D005335 ORTHO05D006472 1.0e-27 127.5 175 63.4
Nn3g16458 Nelumbo nucifera HOM05D005335 ORTHO05D006472 3.8e-27 125.6 171 47.4
Haze_07140 Corylus avellana HOM05D005335 ORTHO05D006472 5.0e-27 125.2 172 65.1
TAR371G0199 Trochodendron aralioides HOM05D005335 ORTHO05D006472 5.0e-27 125.2 172 54.7
Oeu045458.1 Olea europaea HOM05D005335 ORTHO05D006472 6.5e-27 124.8 175 62.3
Oeu045459.1 Olea europaea HOM05D005335 ORTHO05D006472 6.5e-27 124.8 175 62.3
Cpa.g.sc13.114 Carica papaya HOM05D005335 ORTHO05D006472 8.5e-27 124.4 181 62.4
QL10p002879 Quercus lobata HOM05D005335 ORTHO05D006472 3.2e-26 122.5 185 53.5
Thecc.03G129400 Theobroma cacao HOM05D005335 ORTHO05D006472 2.1e-25 119.8 178 59.0
COL.COLO4_28131 Corchorus olitorius HOM05D005335 ORTHO05D006472 2.7e-25 119.4 185 60.0
CiPaw.11G007000 Carya illinoinensis HOM05D005335 ORTHO05D006472 1.0e-24 117.5 176 59.7
Lsat_1_v5_gn_4_80981 Lactuca sativa HOM05D005335 ORTHO05D006472 1.0e-24 117.5 175 60.0
Cfa018794 Carpinus fangiana HOM05D005335 ORTHO05D006472 1.3e-24 117.1 178 63.5
Duzib205G0334 Durio zibethinus HOM05D005335 ORTHO05D006472 1.3e-24 117.1 173 55.5
FAN13G0785 Fragaria x ananassa HOM05D005335 ORTHO05D006472 2.3e-24 116.3 179 54.7
TAR629G1091 Trochodendron aralioides HOM05D005335 ORTHO05D006472 2.3e-24 116.3 173 57.8
Oeu005014.1 Olea europaea HOM05D005335 ORTHO05D006472 3.0e-24 115.9 166 57.2
Potri.012G097901 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.9e-24 115.5 185 58.9
CSS0021703 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 5.1e-24 115.2 169 45.6
Atru.chr6.1795 Acer truncatum HOM05D005335 ORTHO05D006472 1.5e-23 113.6 180 55.6
DCAR_016388 Daucus carota HOM05D005335 ORTHO05D006472 1.9e-23 113.2 174 58.6
Peaxi162Scf00009g00007 Petunia axillaris HOM05D005335 ORTHO05D006472 3.3e-23 112.5 164 61.0
Gohir.D09G247500 Gossypium hirsutum HOM05D005335 ORTHO05D006472 4.3e-23 112.1 175 46.3
Sopen03g032000 Solanum pennellii HOM05D005335 ORTHO05D006472 5.7e-23 111.7 179 58.1
Gohir.D05G361600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 7.4e-23 111.3 172 44.8
Sed0021893 Sechium edule HOM05D005335 ORTHO05D006472 7.4e-23 111.3 173 56.6
CSS0038536 Camellia sinensis var. sinensis HOM05D005335 ORTHO05D006472 9.7e-23 110.9 187 47.6
Gohir.A09G247000 Gossypium hirsutum HOM05D005335 ORTHO05D006472 9.7e-23 110.9 175 50.9
Gorai.006G272000 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.7e-23 110.9 175 45.7
Gorai.009G431200 Gossypium raimondii HOM05D005335 ORTHO05D006472 9.7e-23 110.9 172 44.8
CAN.G1305.23 Capsicum annuum HOM05D005335 ORTHO05D006472 1.7e-22 110.2 177 57.1
HanXRQChr09g0273241 Helianthus annuus HOM05D005335 ORTHO05D006472 1.7e-22 110.2 170 57.1
Solyc03g112920.1 Solanum lycopersicum HOM05D005335 ORTHO05D006472 2.2e-22 109.8 179 57.5
Nn4g22311 Nelumbo nucifera HOM05D005335 ORTHO05D006472 2.8e-22 109.4 174 60.9
PGR044G0086 Punica granatum HOM05D005335 ORTHO05D006472 2.8e-22 109.4 181 51.4
TWI39G0987 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 2.8e-22 109.4 174 60.3
CsaV3_1G000550 Cucumis sativus L. HOM05D005335 ORTHO05D006472 3.7e-22 109.0 172 60.5
RcHm_v2.0_Chr7g0190101 Rosa chinensis HOM05D005335 ORTHO05D006472 3.7e-22 109.0 173 60.1
Actinidia36728 Actinidia chinensis HOM05D005335 ORTHO05D006472 4.8e-22 108.6 159 44.7
Ciclev10032959m.g Citrus clementina HOM05D005335 ORTHO05D006472 4.8e-22 108.6 169 56.2
MD06G1141500 Malus domestica HOM05D005335 ORTHO05D006472 4.8e-22 108.6 177 58.2
FAN04G0838 Fragaria x ananassa HOM05D005335 ORTHO05D006472 6.3e-22 108.2 180 58.3
PSO017G0745 Papaver somniferum HOM05D005335 ORTHO05D006472 6.3e-22 108.2 186 48.9
FAN08G1274 Fragaria x ananassa HOM05D005335 ORTHO05D006472 1.1e-21 107.5 180 58.9
Gohir.D08G258700 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.4e-21 107.1 175 44.0
vmacro19206 Vaccinium macrocarpon HOM05D005335 ORTHO05D006472 1.8e-21 106.7 175 48.0
Manes.06G119800 Manihot esculenta HOM05D005335 ORTHO05D006472 3.1e-21 105.9 183 56.3
PSO478G2775 Papaver somniferum HOM05D005335 ORTHO05D006472 3.1e-21 105.9 186 52.7
A01p25690 Brassica napus HOM05D005335 ORTHO05D006472 4.1e-21 105.5 178 43.3
BraA01t02445Z Brassica rapa HOM05D005335 ORTHO05D006472 4.1e-21 105.5 178 43.3
Dinv23148 Davidia involucrata HOM05D005335 ORTHO05D006472 4.1e-21 105.5 114 61.4
Nitab4.5_0000514g0170 Nicotiana tabacum HOM05D005335 ORTHO05D006472 4.1e-21 105.5 171 57.3
PGSC0003DMG400018091 Solanum tuberosum HOM05D005335 ORTHO05D006472 4.1e-21 105.5 177 55.9
FvH4_5g08350 Fragaria vesca HOM05D005335 ORTHO05D006472 6.9e-21 104.8 176 58.5
Nitab4.5_0002403g0010 Nicotiana tabacum HOM05D005335 ORTHO05D006472 6.9e-21 104.8 175 55.4
FAN18G1337 Fragaria x ananassa HOM05D005335 ORTHO05D006472 9.1e-21 104.4 176 58.5
Lalb_Chr13g0297231 Lupinus albus HOM05D005335 ORTHO05D006472 9.1e-21 104.4 173 52.0
Rhsim12G0175000 Rhododendron simsii HOM05D005335 ORTHO05D006472 9.1e-21 104.4 174 49.4
BcaB05g23008 Brassica carinata HOM05D005335 ORTHO05D006472 1.5e-20 103.6 178 43.3
Gohir.A04G026600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-20 103.6 131 51.1
Gohir.D07G055600 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.5e-20 103.6 174 55.7
Gorai.001G058900 Gossypium raimondii HOM05D005335 ORTHO05D006472 1.5e-20 103.6 174 55.7
MBI11_g05328_MAGBIO Magnolia biondii HOM05D001420 ORTHO05D002488 2.6e-20 102.8 151 58.9
Lalb_Chr07g0183461 Lupinus albus HOM05D005335 ORTHO05D006472 3.4e-20 102.4 172 57.6
Sabra12G0071600 Salix brachista HOM05D005335 ORTHO05D006472 3.4e-20 102.4 161 60.2
Gorai.004G276200 Gossypium raimondii HOM05D005335 ORTHO05D006472 4.5e-20 102.1 173 45.1
Aqoxy5G03368 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 1.0e-19 100.9 170 54.7
BolC1t03128H Brassica oleracea HOM05D005335 ORTHO05D006472 2.2e-19 99.8 178 41.0
MD14G1156700 Malus domestica HOM05D005335 ORTHO05D006472 2.9e-19 99.4 177 57.6
Prupe.5G150800 Prunus persica HOM05D005335 ORTHO05D006472 2.9e-19 99.4 156 61.5
VMungo1215G0398 Vigna mungo HOM05D005335 ORTHO05D006472 3.8e-19 99.0 172 58.1
MSTRG.11283 Avicennia marina HOM05D005335 ORTHO05D006472 6.5e-19 98.2 172 48.8
A06p19120 Brassica napus HOM05D005335 ORTHO05D006472 1.1e-18 97.4 174 41.4
BraA06t24996Z Brassica rapa HOM05D005335 ORTHO05D006472 1.1e-18 97.4 174 41.4
Gohir.A07G051200 Gossypium hirsutum HOM05D005335 ORTHO05D006472 1.4e-18 97.1 170 54.1
HanXRQChr16g0498141 Helianthus annuus HOM05D005335 ORTHO05D006472 1.4e-18 97.1 178 54.5
Sabra15G0117300 Salix brachista HOM05D005335 ORTHO05D006472 1.4e-18 97.1 182 52.2
Sp5g13430 Schrenkiella parvula HOM05D005335 ORTHO05D006472 1.9e-18 96.7 122 48.4
Aqoxy3G00598 Aquilegia oxysepala HOM05D005335 ORTHO05D006472 3.2e-18 95.9 170 52.9
Potri.015G096500 Populus trichocarpa HOM05D005335 ORTHO05D006472 3.2e-18 95.9 181 53.0
DCAR_007490 Daucus carota HOM05D005335 ORTHO05D006472 4.2e-18 95.5 167 39.5
Lj4g0005056 Lotus japonicus HOM05D005335 ORTHO05D006472 4.2e-18 95.5 172 45.3
AL5G28000 Arabidopsis lyrata HOM05D005335 ORTHO05D006472 5.5e-18 95.1 181 38.7
TWI23G0456 Tripterygium wilfordii HOM05D005335 ORTHO05D006472 5.5e-18 95.1 173 58.4
Ca_26102_v3 Cicer arietinum L. HOM05D005335 ORTHO05D006472 7.2e-18 94.7 173 54.9
Migut.D01260 Erythranthe guttata HOM05D005335 ORTHO05D006472 7.2e-18 94.7 182 55.5
Thhalv10010777m.g Eutrema salsugineum HOM05D005335 ORTHO05D006472 7.2e-18 94.7 172 41.9
Carub.0005s1474 Capsella rubella HOM05D005335 ORTHO05D006472 2.7e-17 92.8 123 46.3
Oeu030248.1 Olea europaea HOM05D005335 ORTHO05D006472 2.7e-17 92.8 168 57.7
Actinidia08873 Actinidia chinensis HOM05D001420 ORTHO05D002488 3.6e-17 92.4 168 45.2
Sed0012251 Sechium edule HOM05D005335 ORTHO05D006472 7.9e-17 91.3 169 57.4
AT3G48550 Arabidopsis thaliana HOM05D005335 ORTHO05D006472 1.4e-16 90.5 169 37.3
BcaC09g49876 Brassica carinata HOM05D005335 ORTHO05D006472 3.9e-16 89.0 178 53.9
CiPaw.12G043300 Carya illinoinensis HOM05D005335 ORTHO05D006472 3.9e-16 89.0 171 52.6
PSO017G4217 Papaver somniferum HOM05D005335 ORTHO05D006472 3.9e-16 89.0 138 59.4
PSO478G4723 Papaver somniferum HOM05D005335 ORTHO05D006472 6.7e-16 88.2 138 57.2
Actinidia25571 Actinidia chinensis HOM05D005335 ORTHO05D006472 1.1e-15 87.4 110 56.4
Psat4g066680 Pisum sativum HOM05D005335 ORTHO05D006472 1.5e-15 87.0 175 53.1
BcaB01g00799 Brassica carinata HOM05D005335 ORTHO05D006472 2.0e-15 86.7 178 38.8
BcaC07g39341 Brassica carinata HOM05D005335 ORTHO05D006472 2.0e-15 86.7 169 39.1
C08p23580 Brassica napus HOM05D005335 ORTHO05D006472 2.0e-15 86.7 169 39.1
BolC8t49988H Brassica oleracea HOM05D005335 ORTHO05D006472 2.0e-15 86.7 169 39.1
Glyma.17G130400 Glycine max HOM05D005335 ORTHO05D006472 2.6e-15 86.3 172 55.2
Sc04g0000630 Simmondsia chinensis HOM05D005335 ORTHO05D006472 2.6e-15 86.3 166 39.2
TPR.G19227 Trifolium pratense HOM05D005335 ORTHO05D006472 3.3e-15 85.9 175 52.6
Aa31LG4G17170 Aethionema arabicum HOM05D005335 ORTHO05D006472 4.4e-15 85.5 95 49.5
Migut.I00507 Erythranthe guttata HOM05D005335 ORTHO05D006472 7.4e-15 84.7 181 50.8
Manes.14G051200 Manihot esculenta HOM05D005335 ORTHO05D006472 1.7e-14 83.6 170 51.2
Medtr4g103250 Medicago truncatula HOM05D005335 ORTHO05D006472 2.8e-14 82.8 173 53.8
Glyma.05G048500 Glycine max HOM05D005335 ORTHO05D006472 3.7e-14 82.4 173 55.5
SGA_v2.0_scaffold5G02870 Striga asiatica HOM05D005335 ORTHO05D006472 4.8e-14 82.0 132 60.6
THA.LOC104821517 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 4.8e-14 82.0 177 51.4
GSVIVG01008545001 Vitis vinifera HOM05D005335 ORTHO05D006472 8.2e-14 81.3 86 80.2
EL10Ac5g11411 Beta vulgaris HOM05D005335 ORTHO05D006472 1.4e-13 80.5 132 43.2
HanXRQChr05g0155191 Helianthus annuus HOM05D005335 ORTHO05D006472 5.3e-13 78.6 170 52.4
THA.LOC104818185 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 9.1e-13 77.8 168 51.8
Ah.11g045430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 1.5e-12 77.0 130 42.3
Ah.04g153430 Amaranthus hybridus HOM05D005335 ORTHO05D006472 5.9e-12 75.1 127 43.3
AUR62034828 Chenopodium quinoa HOM05D005335 ORTHO05D006472 7.7e-12 74.7 124 42.7
AUR62029609 Chenopodium quinoa HOM05D005335 ORTHO05D006472 1.3e-11 73.9 123 43.1
CANSAT80G0357 Cannabis sativa HOM05D005335 ORTHO05D006472 3.8e-11 72.4 248 39.1
unitig_744.g24466 Utricularia gibba HOM05D005335 ORTHO05D006472 5.0e-11 72.0 166 50.0
C01p32260 Brassica napus HOM05D005335 ORTHO05D006472 1.4e-10 70.5 178 50.6
CARHR157350 Cardamine hirsuta HOM05D005335 ORTHO05D006472 5.5e-10 68.6 122 46.7
THA.LOC104798946 Tarenaya hassleriana HOM05D005335 ORTHO05D006472 2.7e-09 66.2 178 48.3
ECA246G0037 Erigeron canadensis HOM05D005335 ORTHO05D006472 4.7e-09 65.5 173 48.6
SGA_v2.0_scaffold161G37793 Striga asiatica HOM05D005335 ORTHO05D006472 3.9e-08 62.4 126 39.7
SEGI_18714 Sequoiadendron giganteum HOM05D005335 ORTHO05D006472 2.6e-07 59.7 92 66.3
HPP92_009722 Vanilla planifolia HOM05D005335 ORTHO05D006472 3.3e-07 59.3 174 32.2
AUR62042463 Chenopodium quinoa HOM05D000179 ORTHO05D000107 5.7e-07 58.5 130 47.7
CDE11G1049 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 3.7e-06 55.8 168 45.2
Manes.06G001400 Manihot esculenta HOM05D000179 ORTHO05D000107 4.8e-06 55.5 116 47.4
CDE05G0391 Ceratophyllum demersum HOM05D000179 ORTHO05D000107 8.2e-06 54.7 168 41.7


User provided reference genes

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