Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g09660 Coffea canephora HOM05D000931 ORTHO05D002226 8.6e-66 253.4 123 100.0
Cc00_g03060 Coffea canephora HOM05D000931 ORTHO05D002226 2.1e-19 99.4 120 50.0
Cc00_g32320 Coffea canephora HOM05D000931 ORTHO05D002226 3.6e-19 98.6 119 52.9
Lalb_Chr02g0152331 Lupinus albus HOM05D000931 ORTHO05D002226 3.4e-14 82.0 100 45.0
Haze_24615 Corylus avellana HOM05D000931 ORTHO05D002226 1.7e-13 79.7 103 44.7
Prupe.8G224900 Prunus persica HOM05D000931 ORTHO05D002226 3.8e-13 78.6 100 43.0
Cfa002417 Carpinus fangiana HOM05D000931 ORTHO05D002226 5.0e-13 78.2 103 43.7
CAN.G307.28 Capsicum annuum HOM05D000931 ORTHO05D002226 8.5e-13 77.4 120 42.5
Ciclev10023380m.g Citrus clementina HOM05D000931 ORTHO05D002226 8.5e-13 77.4 100 44.0
MSTRG.13375 Avicennia marina HOM05D000931 ORTHO05D002226 3.2e-12 75.5 115 43.5
Cc11_g00620 Coffea canephora HOM05D000931 ORTHO05D002226 4.2e-12 75.1 69 58.0
COL.COLO4_03391 Corchorus olitorius HOM05D000931 ORTHO05D002226 4.2e-12 75.1 100 44.0
Gohir.A11G130266 Gossypium hirsutum HOM05D000931 ORTHO05D002226 4.2e-12 75.1 102 43.1
CSS0032284 Camellia sinensis var. sinensis HOM05D000931 ORTHO05D002226 5.5e-12 74.7 103 44.7
Prupe.1G067500 Prunus persica HOM05D000931 ORTHO05D002226 9.4e-12 73.9 100 41.0
MD05G1029700 Malus domestica HOM05D000931 ORTHO05D002226 1.2e-11 73.6 96 40.6
RcHm_v2.0_Chr6g0288291 Rosa chinensis HOM05D000931 ORTHO05D002226 2.1e-11 72.8 116 40.5
Sopen03g004400 Solanum pennellii HOM05D000931 ORTHO05D002226 2.1e-11 72.8 104 44.2
Gohir.D11G136000 Gossypium hirsutum HOM05D000931 ORTHO05D002226 2.7e-11 72.4 102 42.2
Gorai.007G145600 Gossypium raimondii HOM05D000931 ORTHO05D002226 2.7e-11 72.4 102 42.2
Gohir.A13G128900 Gossypium hirsutum HOM05D000931 ORTHO05D002226 6.1e-11 71.2 102 42.2
DCAR_018475 Daucus carota HOM05D000931 ORTHO05D002226 7.9e-11 70.9 116 37.1
QL09p038412 Quercus lobata HOM05D000931 ORTHO05D002226 1.0e-10 70.5 98 41.8
TWI12G1477 Tripterygium wilfordii HOM05D000931 ORTHO05D002226 1.0e-10 70.5 104 39.4
TWI18G0379 Tripterygium wilfordii HOM05D000931 ORTHO05D002226 1.4e-10 70.1 101 42.6
PGSC0003DMG400015794 Solanum tuberosum HOM05D000931 ORTHO05D002226 1.8e-10 69.7 117 41.0
DCAR_016680 Daucus carota HOM05D000931 ORTHO05D002226 2.3e-10 69.3 116 38.8
Duzib138G1910 Durio zibethinus HOM05D000931 ORTHO05D002226 2.3e-10 69.3 100 42.0
Rhsim01G0265100 Rhododendron simsii HOM05D003708 ORTHO05D004452 2.3e-10 69.3 103 39.8
CAN.G479.48 Capsicum annuum HOM05D000931 ORTHO05D002226 3.0e-10 68.9 113 37.2
Nitab4.5_0005845g0020 Nicotiana tabacum HOM05D000931 ORTHO05D002226 3.0e-10 68.9 99 42.4
FAN20G1518 Fragaria x ananassa HOM05D000931 ORTHO05D002226 3.9e-10 68.6 100 41.0
Sabra02G0031700 Salix brachista HOM05D000931 ORTHO05D002226 3.9e-10 68.6 96 38.5
SalBow7G3097 Salvia bowleyana HOM05D000931 ORTHO05D002226 6.7e-10 67.8 90 46.7
FAN15G2803 Fragaria x ananassa HOM05D000931 ORTHO05D002226 1.5e-09 66.6 98 39.8
vmacro18459 Vaccinium macrocarpon HOM05D000931 ORTHO05D002226 1.5e-09 66.6 95 44.2
Nitab4.5_0000084g0020 Nicotiana tabacum HOM05D000931 ORTHO05D002226 2.0e-09 66.2 116 37.1
Peaxi162Scf00681g00217 Petunia axillaris HOM05D000931 ORTHO05D002226 3.3e-09 65.5 87 44.8
SalBow1G8549 Salvia bowleyana HOM05D000931 ORTHO05D002226 3.3e-09 65.5 88 45.5
Thecc.01G259700 Theobroma cacao HOM05D000931 ORTHO05D002226 4.4e-09 65.1 97 43.3
Migut.E00156 Erythranthe guttata HOM05D000931 ORTHO05D002226 5.7e-09 64.7 95 45.3
Hund09598 Selenicereus undatus HOM05D000931 ORTHO05D002226 5.7e-09 64.7 104 36.5
SHI11159 Sapria himalayana HOM05D000931 ORTHO05D002226 7.4e-09 64.3 107 40.2
Dinv14168 Davidia involucrata HOM05D000931 ORTHO05D002226 9.7e-09 63.9 78 46.2
Aqoxy6G01636 Aquilegia oxysepala HOM05D000931 ORTHO05D002226 1.3e-08 63.5 110 36.4
Sc05g0000720 Simmondsia chinensis HOM05D000931 ORTHO05D002226 1.7e-08 63.2 115 37.4
Eucgr.I02228 Eucalyptus grandis HOM05D000931 ORTHO05D002226 2.2e-08 62.8 78 47.4
Cfa021283 Carpinus fangiana HOM05D000931 ORTHO05D002226 2.8e-08 62.4 94 38.3
unitig_27.g25196 Utricularia gibba HOM05D000931 ORTHO05D002226 2.8e-08 62.4 81 48.1
FAN03G2462 Fragaria x ananassa HOM05D000931 ORTHO05D002226 3.7e-08 62.0 104 36.5
Thecc.01G006200 Theobroma cacao HOM05D000931 ORTHO05D002226 3.7e-08 62.0 107 40.2
Aqoxy7G03441 Aquilegia oxysepala HOM05D004841 ORTHO05D005874 4.8e-08 61.6 99 39.4
Hund02900 Selenicereus undatus HOM05D000931 ORTHO05D002226 4.8e-08 61.6 104 38.5
Actinidia28744 Actinidia chinensis HOM05D000931 ORTHO05D002226 6.3e-08 61.2 95 42.1
AUR62009987 Chenopodium quinoa HOM05D000931 ORTHO05D002226 6.3e-08 61.2 100 39.0
Haze_03667 Corylus avellana HOM05D000931 ORTHO05D002226 6.3e-08 61.2 114 36.8
Manes.01G154700 Manihot esculenta HOM05D000931 ORTHO05D002226 6.3e-08 61.2 79 45.6
Manes.17G004100 Manihot esculenta HOM05D000931 ORTHO05D002226 6.3e-08 61.2 79 45.6
Cfa007073 Carpinus fangiana HOM05D000931 ORTHO05D002226 8.2e-08 60.8 112 33.0
Cfa021282 Carpinus fangiana HOM05D000931 ORTHO05D002226 8.2e-08 60.8 112 33.0
FvH4_2g21620 Fragaria vesca HOM05D000931 ORTHO05D002226 8.2e-08 60.8 100 38.0
FAN24G2423 Fragaria x ananassa HOM05D000931 ORTHO05D002226 8.2e-08 60.8 100 38.0
RcHm_v2.0_Chr2g0097351 Rosa chinensis HOM05D000931 ORTHO05D002226 8.2e-08 60.8 116 38.8
Atru.chr1.1797 Acer truncatum HOM05D000931 ORTHO05D002226 1.1e-07 60.5 96 40.6
AUR62024723 Chenopodium quinoa HOM05D000931 ORTHO05D002226 1.1e-07 60.5 93 40.9
COL.COLO4_34297 Corchorus olitorius HOM05D000931 ORTHO05D002226 1.1e-07 60.5 83 39.8
FAN19G1065 Fragaria x ananassa HOM05D000931 ORTHO05D002226 1.1e-07 60.5 117 41.9
MD15G1232700 Malus domestica HOM05D000931 ORTHO05D002226 1.1e-07 60.5 104 41.3
Phvul.003G269600 Phaseolus vulgaris HOM05D000931 ORTHO05D002226 1.1e-07 60.5 98 40.8
Rhsim08G0027600 Rhododendron simsii HOM05D000931 ORTHO05D002226 1.1e-07 60.5 117 37.6
arahy.Tifrunner.gnm1.ann1.590LKT Arachis hypogaea HOM05D000931 ORTHO05D002226 1.4e-07 60.1 119 33.6
Ca_22425_v3 Cicer arietinum L. HOM05D000931 ORTHO05D002226 1.4e-07 60.1 102 41.2
Gohir.D04G152700 Gossypium hirsutum HOM05D000931 ORTHO05D002226 1.4e-07 60.1 113 40.7
Hma1.2p1_0085F.1_g044820 Hydrangea macrophylla HOM05D000931 ORTHO05D002226 1.4e-07 60.1 95 41.1
Potri.002G039400 Populus trichocarpa HOM05D000931 ORTHO05D002226 1.4e-07 60.1 87 36.8
Thecc.02G144800 Theobroma cacao HOM05D000931 ORTHO05D002226 1.4e-07 60.1 96 39.6
FvH4_7g34231 Fragaria vesca HOM05D000931 ORTHO05D002226 1.8e-07 59.7 100 38.0
Lj2P1152T43 Lonicera japonica HOM05D000931 ORTHO05D002226 1.8e-07 59.7 89 43.8
PGR119G1234 Punica granatum HOM05D000931 ORTHO05D002226 1.8e-07 59.7 80 43.8
Sed0019701 Sechium edule HOM05D000931 ORTHO05D002226 1.8e-07 59.7 78 42.3
VMungo1383G2929 Vigna mungo HOM05D000931 ORTHO05D002226 1.8e-07 59.7 99 38.4
arahy.Tifrunner.gnm1.ann1.YTAQ5W Arachis hypogaea HOM05D000931 ORTHO05D002226 2.4e-07 59.3 119 33.6
Cpa.g.sc6.343 Carica papaya HOM05D000931 ORTHO05D002226 2.4e-07 59.3 90 38.9
FvH4_1g10480 Fragaria vesca HOM05D000931 ORTHO05D002226 2.4e-07 59.3 117 41.0
FAN26G0486 Fragaria x ananassa HOM05D000931 ORTHO05D002226 2.4e-07 59.3 117 41.0
FAN26G3313 Fragaria x ananassa HOM05D000931 ORTHO05D002226 2.4e-07 59.3 117 41.0
Potri.005G100800 Populus trichocarpa HOM05D000931 ORTHO05D002226 2.4e-07 59.3 112 38.4
CSS0002140 Camellia sinensis var. sinensis HOM05D000931 ORTHO05D002226 3.1e-07 58.9 113 38.1
Cpa.g.sc6.344 Carica papaya HOM05D000931 ORTHO05D002226 3.1e-07 58.9 90 38.9
COL.COLO4_20888 Corchorus olitorius HOM05D000931 ORTHO05D002226 3.1e-07 58.9 74 44.6
TAR376G0627 Trochodendron aralioides HOM05D000046 ORTHO05D002226 3.1e-07 58.9 93 41.9
GSVIVG01028311001 Vitis vinifera HOM05D000931 ORTHO05D002226 3.1e-07 58.9 76 43.4
Gohir.A04G112048 Gossypium hirsutum HOM05D000931 ORTHO05D002226 4.1e-07 58.5 113 38.1
ClCG09G016170 Citrullus lanatus HOM05D000931 ORTHO05D002226 5.3e-07 58.2 108 34.3
Hma1.2p1_0300F.1_g118070 Hydrangea macrophylla HOM05D000931 ORTHO05D002226 5.3e-07 58.2 74 44.6
Lsat_1_v5_gn_2_73420 Lactuca sativa HOM05D000931 ORTHO05D002226 5.3e-07 58.2 101 35.6
Hma1.2p1_0747F.1_g212390 Hydrangea macrophylla HOM05D000931 ORTHO05D002226 7.0e-07 57.8 89 40.4
COL.COLO4_20889 Corchorus olitorius HOM05D000931 ORTHO05D002226 9.1e-07 57.4 82 39.0
MELO3C018615.2 Cucumis melo HOM05D000931 ORTHO05D002226 9.1e-07 57.4 114 35.1
FAN23G1074 Fragaria x ananassa HOM05D000931 ORTHO05D002226 9.1e-07 57.4 102 42.2
Hma1.2p1_0300F.1_g118060 Hydrangea macrophylla HOM05D000931 ORTHO05D002226 9.1e-07 57.4 75 45.3
VMungo0251G0658 Vigna mungo HOM05D000931 ORTHO05D002226 9.1e-07 57.4 99 37.4
CiPaw.08G181100 Carya illinoinensis HOM05D000931 ORTHO05D002226 1.2e-06 57.0 114 35.1
Nn5g27177 Nelumbo nucifera HOM05D000931 ORTHO05D002226 1.2e-06 57.0 101 37.6
Ciclev10025904m.g Citrus clementina HOM05D000931 ORTHO05D002226 1.5e-06 56.6 88 40.9
HanXRQChr14g0442491 Helianthus annuus HOM05D000931 ORTHO05D002226 1.5e-06 56.6 85 37.6
Oeu039715.1 Olea europaea HOM05D000931 ORTHO05D002226 1.5e-06 56.6 97 38.1
Prupe.7G181400 Prunus persica HOM05D000931 ORTHO05D002226 1.5e-06 56.6 76 47.4
TAR625G0158 Trochodendron aralioides HOM05D000931 ORTHO05D002226 1.5e-06 56.6 114 37.7
CsaV3_7G006800 Cucumis sativus L. HOM05D000931 ORTHO05D002226 2.0e-06 56.2 78 41.0
ECA234G2738 Erigeron canadensis HOM05D000931 ORTHO05D001289 2.0e-06 56.2 92 42.4
FAN28G1721 Fragaria x ananassa HOM05D000931 ORTHO05D002226 2.0e-06 56.2 117 40.2
Nitab4.5_0004979g0120 Nicotiana tabacum HOM05D000931 ORTHO05D002226 2.0e-06 56.2 80 42.5
Atru.chr3.3657 Acer truncatum HOM05D000931 ORTHO05D002226 2.6e-06 55.8 92 38.0
Ciclev10030317m.g Citrus clementina HOM05D000931 ORTHO05D002226 2.6e-06 55.8 113 31.9
Thecc.02G135600 Theobroma cacao HOM05D000931 ORTHO05D002226 2.6e-06 55.8 77 39.0
ECA238G1130 Erigeron canadensis HOM05D000931 ORTHO05D002226 3.4e-06 55.5 81 38.3
FvH4_1g10471 Fragaria vesca HOM05D000931 ORTHO05D002226 3.4e-06 55.5 99 37.4
Lsat_1_v5_gn_6_43520 Lactuca sativa HOM05D000931 ORTHO05D002226 3.4e-06 55.5 86 41.9
MD02G1118000 Malus domestica HOM05D000931 ORTHO05D002226 3.4e-06 55.5 80 46.2
Peaxi162Scf00444g00061 Petunia axillaris HOM05D000931 ORTHO05D002226 3.4e-06 55.5 81 40.7
SGA_v2.0_scaffold47G17654 Striga asiatica HOM05D000931 ORTHO05D002226 3.4e-06 55.5 78 42.3
Duzib147G1080 Durio zibethinus HOM05D000931 ORTHO05D002226 4.5e-06 55.1 105 39.0
Manes.06G062700 Manihot esculenta HOM05D000931 ORTHO05D002226 4.5e-06 55.1 94 40.4
ECA238G4736 Erigeron canadensis HOM05D000931 ORTHO05D002226 5.9e-06 54.7 124 33.9
Gorai.012G139500 Gossypium raimondii HOM05D000931 ORTHO05D002226 5.9e-06 54.7 113 38.1
Thecc.02G144700 Theobroma cacao HOM05D000931 ORTHO05D002226 5.9e-06 54.7 74 41.9
Sed0026874 Sechium edule HOM05D000931 ORTHO05D002226 7.7e-06 54.3 104 34.6


User provided reference genes

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