Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g08950 Coffea canephora HOM05D003336 ORTHO05D003807 1.1e-80 303.1 148 100.0
MSTRG.9761 Avicennia marina HOM05D003336 ORTHO05D003807 3.3e-72 275.0 143 93.7
Migut.O00911 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.4e-70 269.6 143 91.6
Migut.N03104 Erythranthe guttata HOM05D003336 ORTHO05D003807 1.8e-70 269.2 143 90.9
Eucgr.H01866 Eucalyptus grandis HOM05D003336 ORTHO05D003807 9.1e-70 266.9 141 91.5
Eucgr.A00092 Eucalyptus grandis HOM05D003336 ORTHO05D003807 1.2e-69 266.5 141 90.8
CANSAT78G0594 Cannabis sativa HOM05D003336 ORTHO05D003807 4.5e-69 264.6 144 91.0
Eucgr.A00283 Eucalyptus grandis HOM05D003336 ORTHO05D003807 4.5e-69 264.6 141 90.1
Rhsim09G0026500 Rhododendron simsii HOM05D003336 ORTHO05D003807 4.5e-69 264.6 141 91.5
RhsimUnG0196100 Rhododendron simsii HOM05D003336 ORTHO05D003807 4.5e-69 264.6 141 91.5
Eucgr.L00050 Eucalyptus grandis HOM05D003336 ORTHO05D003807 5.9e-69 264.2 141 90.1
Gorai.005G016800 Gossypium raimondii HOM05D003336 ORTHO05D003807 1.0e-68 263.5 147 87.1
SGA_v2.0_scaffold1G00608 Striga asiatica HOM05D003336 ORTHO05D003807 1.7e-68 262.7 140 90.0
EL10Ac3g06008 Beta vulgaris HOM05D003336 ORTHO05D003807 2.9e-68 261.9 143 88.8
AUR62030962 Chenopodium quinoa HOM05D003336 ORTHO05D003807 2.9e-68 261.9 145 87.6
Hma1.2p1_0886F.1_g232710 Hydrangea macrophylla HOM05D003336 ORTHO05D003807 2.9e-68 261.9 138 90.6
AUR62011428 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.8e-68 261.5 145 86.9
Gohir.D02G013300 Gossypium hirsutum HOM05D003336 ORTHO05D003807 3.8e-68 261.5 147 86.4
AUR62008210 Chenopodium quinoa HOM05D003336 ORTHO05D003807 5.0e-68 261.2 145 86.2
Aqoxy2G03656 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 6.5e-68 260.8 143 88.8
Ciclev10001634m.g Citrus clementina HOM05D003336 ORTHO05D003807 6.5e-68 260.8 147 87.8
MELO3C021601.2 Cucumis melo HOM05D003336 ORTHO05D003807 8.5e-68 260.4 137 92.0
CsaV3_5G026930 Cucumis sativus L. HOM05D003336 ORTHO05D003807 1.1e-67 260.0 137 92.0
Gohir.A02G012500 Gossypium hirsutum HOM05D003336 ORTHO05D003807 1.1e-67 260.0 138 90.6
Sc25g0002520 Simmondsia chinensis HOM05D003336 ORTHO05D003807 1.1e-67 260.0 143 88.1
Lsat_1_v5_gn_3_6100 Lactuca sativa HOM05D003336 ORTHO05D003807 1.4e-67 259.6 140 87.9
Solyc02g068750.1 Solanum lycopersicum HOM05D003336 ORTHO05D003807 1.4e-67 259.6 142 87.3
Sopen02g017920 Solanum pennellii HOM05D003336 ORTHO05D003807 1.4e-67 259.6 142 88.0
CAN.G149.29 Capsicum annuum HOM05D003336 ORTHO05D003807 1.9e-67 259.2 139 89.9
MELO3C013276.2 Cucumis melo HOM05D003336 ORTHO05D003807 1.9e-67 259.2 137 91.2
PGSC0003DMG400010450 Solanum tuberosum HOM05D003336 ORTHO05D003807 1.9e-67 259.2 142 88.0
CSS0043784 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.5e-67 258.8 137 90.5
Duzib151G0181 Durio zibethinus HOM05D003336 ORTHO05D003807 2.5e-67 258.8 140 88.6
Sed0018746 Sechium edule HOM05D003336 ORTHO05D003807 2.5e-67 258.8 138 90.6
Thecc.04G177600 Theobroma cacao HOM05D003336 ORTHO05D003807 3.2e-67 258.5 140 88.6
arahy.Tifrunner.gnm1.ann1.4MR6LE Arachis hypogaea HOM05D003336 ORTHO05D003807 4.2e-67 258.1 143 86.7
arahy.Tifrunner.gnm1.ann1.HN7X2L Arachis hypogaea HOM05D003336 ORTHO05D003807 4.2e-67 258.1 143 86.7
CSS0038565 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 5.5e-67 257.7 137 89.8
Oeu061601.1 Olea europaea HOM05D003336 ORTHO05D003807 5.5e-67 257.7 136 91.9
PGR083G1911 Punica granatum HOM05D003336 ORTHO05D003807 5.5e-67 257.7 145 86.2
QL07p004835 Quercus lobata HOM05D003336 ORTHO05D003807 5.5e-67 257.7 147 87.1
CiPaw.02G054300 Carya illinoinensis HOM05D003336 ORTHO05D003807 7.2e-67 257.3 139 89.2
Os05g0194600 Oryza sativa ssp. japonica HOM05D003336 ORTHO05D003807 7.2e-67 257.3 138 89.9
THA.LOC104806347 Tarenaya hassleriana HOM05D003336 ORTHO05D003807 7.2e-67 257.3 135 91.9
Manes.04G043500 Manihot esculenta HOM05D003336 ORTHO05D003807 1.2e-66 256.5 144 85.4
ClCG10G008650 Citrullus lanatus HOM05D003336 ORTHO05D003807 2.1e-66 255.8 135 91.1
PSO210G2800 Papaver somniferum HOM05D003336 ORTHO05D003807 2.1e-66 255.8 145 84.8
FvH4_3g16550 Fragaria vesca HOM05D003336 ORTHO05D003807 2.7e-66 255.4 144 86.1
FAN16G2332 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.7e-66 255.4 144 86.1
FAN25G0065 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.7e-66 255.4 144 86.1
GSVIVG01006062001 Vitis vinifera HOM05D003336 ORTHO05D003807 2.7e-66 255.4 138 87.7
ECA246G0584 Erigeron canadensis HOM05D003336 ORTHO05D003807 3.6e-66 255.0 142 86.6
Potri.017G029200 Populus trichocarpa HOM05D003336 ORTHO05D003807 3.6e-66 255.0 138 87.0
arahy.Tifrunner.gnm1.ann1.H7WPER Arachis hypogaea HOM05D003336 ORTHO05D003807 4.7e-66 254.6 143 84.6
HPP92_018106 Vanilla planifolia HOM05D003336 ORTHO05D003807 4.7e-66 254.6 141 86.5
Atru.chr6.1778 Acer truncatum HOM05D003336 ORTHO05D003807 6.1e-66 254.2 140 87.1
ATR0796G111 Amborella trichopoda HOM05D003336 ORTHO05D003807 6.1e-66 254.2 135 88.9
Zm00001eb283430 Zea mays HOM05D003336 ORTHO05D003807 6.1e-66 254.2 144 84.7
FAN11G0541 Fragaria x ananassa HOM05D003336 ORTHO05D003807 8.0e-66 253.8 140 86.4
Glyma.17G108000 Glycine max HOM05D003336 ORTHO05D003807 8.0e-66 253.8 135 89.6
Glyma.19G252200 Glycine max HOM05D003336 ORTHO05D003807 8.0e-66 253.8 143 85.3
RcHm_v2.0_Chr1g0331181 Rosa chinensis HOM05D003336 ORTHO05D003807 8.0e-66 253.8 140 86.4
Ah.11g051610 Amaranthus hybridus HOM05D003336 ORTHO05D003807 1.0e-65 253.4 144 84.7
Psat6g173800 Pisum sativum HOM05D003336 ORTHO05D003807 1.0e-65 253.4 144 84.7
VMungo0540G1651 Vigna mungo HOM05D003336 ORTHO05D003807 1.0e-65 253.4 143 86.0
FAN03G2504 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.4e-65 253.1 146 83.6
TPR.G37811 Trifolium pratense HOM05D003336 ORTHO05D003807 1.4e-65 253.1 144 84.7
AT4G22720 Arabidopsis thaliana HOM05D003336 ORTHO05D003807 1.8e-65 252.7 139 87.1
Carub.0007s1861 Capsella rubella HOM05D003336 ORTHO05D003807 1.8e-65 252.7 138 87.0
HanXRQChr17g0533451 Helianthus annuus HOM05D003336 ORTHO05D003807 2.3e-65 252.3 144 83.3
Lj1g0015608 Lotus japonicus HOM05D003336 ORTHO05D003807 2.3e-65 252.3 141 85.8
Zm00001eb376450 Zea mays HOM05D003336 ORTHO05D003807 2.3e-65 252.3 144 83.3
Medtr1g090817 Medicago truncatula HOM05D003336 ORTHO05D003807 3.0e-65 251.9 144 84.0
Phvul.006G109300 Phaseolus vulgaris HOM05D003336 ORTHO05D003807 3.0e-65 251.9 143 85.3
Zm00001eb016890 Zea mays HOM05D003336 ORTHO05D003807 3.0e-65 251.9 144 84.0
Zm00001eb121330 Zea mays HOM05D003336 ORTHO05D003807 3.0e-65 251.9 144 84.0
Zm00001eb336440 Zea mays HOM05D003336 ORTHO05D003807 3.0e-65 251.9 144 84.0
AL7G30880 Arabidopsis lyrata HOM05D003336 ORTHO05D003807 3.9e-65 251.5 139 86.3
CSS0016383 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.9e-65 251.5 137 88.3
Thhalv10025586m.g Eutrema salsugineum HOM05D003336 ORTHO05D003807 3.9e-65 251.5 140 85.7
TWI34G1872 Tripterygium wilfordii HOM05D003336 ORTHO05D003807 3.9e-65 251.5 138 85.5
A01p13940 Brassica napus HOM05D003336 ORTHO05D003807 5.2e-65 251.1 138 87.7
BraA01t01340Z Brassica rapa HOM05D003336 ORTHO05D003807 5.2e-65 251.1 138 87.7
CARHR229640 Cardamine hirsuta HOM05D003336 ORTHO05D003807 6.7e-65 250.8 138 86.2
Zm00001eb059340 Zea mays HOM05D003336 ORTHO05D003807 8.8e-65 250.4 144 83.3
Zm00001eb398700 Zea mays HOM05D003336 ORTHO05D003807 8.8e-65 250.4 144 83.3
BolC1t01638H Brassica oleracea HOM05D003336 ORTHO05D003807 1.5e-64 249.6 138 87.0
FAN10G0305 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.5e-64 249.6 147 82.3
FAN10G0412 Fragaria x ananassa HOM05D003336 ORTHO05D003807 1.5e-64 249.6 147 82.3
Zm00001eb007550 Zea mays HOM05D003336 ORTHO05D003807 1.5e-64 249.6 138 86.2
BcaC09g51096 Brassica carinata HOM05D003336 ORTHO05D003807 2.0e-64 249.2 138 87.0
C01p16980 Brassica napus HOM05D003336 ORTHO05D003807 2.0e-64 249.2 138 87.0
Lalb_Chr18g0044261 Lupinus albus HOM05D003336 ORTHO05D003807 2.0e-64 249.2 135 88.1
BcaNung01042 Brassica carinata HOM05D003336 ORTHO05D003807 2.6e-64 248.8 138 86.2
FAN21G2317 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.6e-64 248.8 144 84.0
QL10p049056 Quercus lobata HOM05D003336 ORTHO05D003807 2.6e-64 248.8 138 86.2
Zm00001eb324020 Zea mays HOM05D003336 ORTHO05D003807 2.6e-64 248.8 144 83.3
Prupe.1G196300 Prunus persica HOM05D003336 ORTHO05D003807 3.3e-64 248.4 141 85.1
TAR365G0105 Trochodendron aralioides HOM05D003336 ORTHO05D003807 3.3e-64 248.4 142 83.1
MD17G1219400 Malus domestica HOM05D003336 ORTHO05D003807 4.4e-64 248.1 141 86.5
Aa31LG6G4680 Aethionema arabicum HOM05D003336 ORTHO05D003807 7.4e-64 247.3 138 85.5
Atru.chr6.1080 Acer truncatum HOM05D003336 ORTHO05D003807 1.3e-63 246.5 140 84.3
FAN06G1925 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.2e-63 245.7 144 83.3
AUR62003310 Chenopodium quinoa HOM05D003336 ORTHO05D003807 3.7e-63 245.0 137 85.4
arahy.Tifrunner.gnm1.ann1.UX0YUZ Arachis hypogaea HOM05D003336 ORTHO05D003807 2.0e-61 239.2 135 85.2
Mapoly0054s0003 Marchantia polymorpha HOM05D003336 ORTHO05D003807 8.5e-60 233.8 138 79.7
SMO196G0197 Selaginella moellendorffii HOM05D003336 ORTHO05D003807 4.2e-59 231.5 136 82.4
SHI23517 Sapria himalayana HOM05D003336 ORTHO05D003807 7.2e-59 230.7 161 72.0
Atru.chr6.1044 Acer truncatum HOM05D003336 ORTHO05D003807 2.3e-57 225.7 140 79.3
Pp3c8_19600 Physcomitrium patens HOM05D003336 ORTHO05D003807 8.2e-55 217.2 140 74.3
CBR_g36984 Chara braunii HOM05D003336 ORTHO05D003807 7.7e-53 210.7 138 74.6
C01p17110 Brassica napus HOM05D003336 ORTHO05D003807 2.9e-52 208.8 130 81.5
CSS0012442 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.5e-52 207.6 140 75.0
RcHm_v2.0_Chr1g0329821 Rosa chinensis HOM05D003336 ORTHO05D003807 1.5e-51 206.5 140 73.6
PRCOL_00003655 Prasinoderma coloniale HOM05D003336 ORTHO05D003807 1.9e-51 206.1 135 73.3
Zm00001eb191860 Zea mays HOM05D003336 ORTHO05D003807 1.0e-49 200.3 106 88.7
MCO05G700 Micromonas commoda HOM05D003336 ORTHO05D003807 3.4e-48 195.3 135 66.7
arahy.Tifrunner.gnm1.ann1.DI9DGG Arachis hypogaea HOM05D003336 ORTHO05D003807 5.4e-46 188.0 109 82.6
Zm00001eb442100 Zea mays HOM05D003336 ORTHO05D003807 9.1e-46 187.2 144 68.8
SpUn1040_0020 Schrenkiella parvula HOM05D003336 ORTHO05D003807 2.3e-44 182.6 104 82.7
SEGI_39923 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 8.6e-44 180.6 97 87.6
C01p17150 Brassica napus HOM05D003336 ORTHO05D003807 1.5e-43 179.9 105 82.9
BolC1t01652H Brassica oleracea HOM05D003336 ORTHO05D003807 1.5e-43 179.9 105 82.9
Aqoxy7G02152 Aquilegia oxysepala HOM05D003336 ORTHO05D003807 1.9e-43 179.5 110 80.9
BcaC09g51089 Brassica carinata HOM05D003336 ORTHO05D003807 1.9e-43 179.5 105 82.9
CSS0001398 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 6.8e-41 171.0 97 86.6
Ciclev10002827m.g Citrus clementina HOM05D003336 ORTHO05D003807 2.2e-39 166.0 92 85.9
C01p17060 Brassica napus HOM05D003336 ORTHO05D003807 6.3e-39 164.5 105 77.1
C01p17090 Brassica napus HOM05D003336 ORTHO05D003807 6.3e-39 164.5 105 77.1
BolC1t01648H Brassica oleracea HOM05D003336 ORTHO05D003807 6.3e-39 164.5 105 77.1
C01p17130 Brassica napus HOM05D003336 ORTHO05D003807 5.9e-37 157.9 105 76.2
BolC1t01651H Brassica oleracea HOM05D003336 ORTHO05D003807 5.9e-37 157.9 105 76.2
CSS0025461 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.3e-35 151.8 140 59.3
Cfa023393 Carpinus fangiana HOM05D003336 ORTHO05D003807 8.0e-34 147.5 164 51.8
Cpa.g.sc9.295 Carica papaya HOM05D003336 ORTHO05D003807 1.0e-33 147.1 79 91.1
FAN15G0900 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.6e-32 142.5 101 68.3
BolC1t01646H Brassica oleracea HOM05D003336 ORTHO05D003807 2.2e-31 139.4 88 77.3
CSS0000567 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.4e-30 136.0 91 74.7
CSS0006022 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 3.5e-29 132.1 80 81.2
CSS0042404 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-26 123.6 65 89.2
CSS0043766 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-26 123.6 65 89.2
FAN13G1004 Fragaria x ananassa HOM05D003336 ORTHO05D003807 2.3e-25 119.4 86 66.3
A08p15940 Brassica napus HOM05D003336 ORTHO05D003807 2.5e-19 99.4 53 88.7
CSS0023275 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.1e-18 96.3 56 80.4
CSS0040953 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 4.0e-17 92.0 80 62.5
CSS0001716 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-16 90.5 70 65.7
CSS0040178 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 1.2e-16 90.5 70 65.7
MBI01_g10302_MAGBIO Magnolia biondii HOM05D003336 ORTHO05D003807 1.5e-11 73.6 62 59.7
Atru.chr7.305 Acer truncatum HOM05D003336 ORTHO05D003807 7.3e-11 71.2 43 76.7
CSS0049342 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 7.3e-11 71.2 68 58.8
CSS0007615 Camellia sinensis var. sinensis HOM05D003336 ORTHO05D003807 2.8e-10 69.3 35 88.6
DCAR_026317 Daucus carota HOM05D003336 ORTHO05D003807 2.8e-10 69.3 35 91.4
Nn1g09612 Nelumbo nucifera HOM05D003336 ORTHO05D003807 6.2e-10 68.2 35 88.6
Atru.chr7.309 Acer truncatum HOM05D003336 ORTHO05D003807 3.1e-09 65.9 39 76.9
SEGI_08325 Sequoiadendron giganteum HOM05D003336 ORTHO05D003807 4.4e-08 62.0 35 80.0
C03p84370 Brassica napus HOM05D000924 ORTHO05D001209 5.8e-08 61.6 41 63.4
Psat6g173760 Pisum sativum HOM05D003336 ORTHO05D003807 1.3e-07 60.5 52 61.5
A08p15930 Brassica napus HOM05D000924 ORTHO05D001209 2.2e-07 59.7 49 61.2
Atru.chr7.310 Acer truncatum HOM05D000001 ORTHO05D009429 6.4e-07 58.2 32 84.4
FAN17G2067 Fragaria x ananassa HOM05D003336 ORTHO05D003807 3.2e-06 55.8 31 83.9


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