Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 1.6e-196 689.5 421 100.0
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 2.6e-98 363.2 458 48.7
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 4.1e-91 339.3 459 48.4
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 2.0e-90 337.0 475 48.0
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 8.5e-89 331.6 465 45.2
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 3.6e-87 326.2 471 46.1
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 5.2e-86 322.4 451 46.3
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 1.5e-85 320.9 406 50.7
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 3.4e-85 319.7 405 49.6
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 4.8e-84 315.8 420 47.9
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 6.3e-84 315.5 417 47.7
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 6.3e-84 315.5 451 47.5
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.4e-83 313.5 406 50.0
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 3.1e-83 313.2 405 47.4
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 4.1e-83 312.8 414 48.8
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 9.1e-83 311.6 408 50.0
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 9.1e-83 311.6 438 46.8
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.7e-82 310.1 445 46.3
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 4.5e-82 309.3 460 45.2
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 5.9e-82 308.9 427 46.4
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 7.7e-82 308.5 408 48.8
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 4.2e-80 302.8 446 46.2
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 2.8e-79 300.1 404 48.5
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 3.6e-79 299.7 418 47.1
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.6e-79 299.7 487 42.1
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 1.4e-78 297.7 460 45.9
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 6.8e-78 295.4 470 43.0
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 8.9e-78 295.0 425 45.9
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 2.6e-77 293.5 447 45.9
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 7.5e-77 292.0 433 46.0
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 1.7e-76 290.8 446 45.7
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 2.2e-76 290.4 444 43.2
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 2.2e-76 290.4 205 70.2
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 4.9e-76 289.3 443 46.0
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 1.8e-75 287.3 409 45.7
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 2.4e-75 287.0 417 45.3
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 1.2e-74 284.6 454 43.2
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 1.2e-74 284.6 440 43.2
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 1.6e-74 284.3 401 46.4
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 2.7e-74 283.5 422 44.5
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 7.8e-74 282.0 417 43.9
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 1.7e-73 280.8 443 45.4
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 6.6e-73 278.9 345 48.7
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 8.6e-73 278.5 394 46.4
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 8.6e-73 278.5 446 43.3
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 8.6e-73 278.5 426 43.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.5e-72 277.7 444 43.9
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 3.3e-72 276.6 448 44.4
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 3.3e-72 276.6 476 41.0
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 2.1e-71 273.9 440 43.4
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 6.1e-71 272.3 463 40.8
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 1.4e-70 271.2 427 43.6
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.8e-70 270.8 446 43.0
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.8e-70 270.8 391 44.8
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 1.8e-70 270.8 465 41.3
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 2.3e-70 270.4 202 68.3
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 6.8e-70 268.9 438 43.8
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 4.4e-69 266.2 389 44.5
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 4.4e-69 266.2 433 43.9
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 5.8e-69 265.8 445 43.8
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 5.4e-67 259.2 182 70.3
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 1.2e-66 258.1 204 63.2
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 2.7e-66 256.9 222 61.3
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 2.7e-66 256.9 276 52.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 3.0e-65 253.4 278 51.1
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 3.3e-64 250.0 339 44.8
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 3.3e-64 250.0 348 46.6
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.3e-64 250.0 450 40.7
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 7.3e-64 248.8 399 43.1
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 7.3e-64 248.8 425 41.9
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.6e-63 247.7 336 45.8
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 4.7e-63 246.1 410 42.7
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 8.0e-63 245.4 372 42.5
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 8.0e-63 245.4 372 42.5
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 4.0e-62 243.0 346 43.6
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 8.9e-62 241.9 341 46.6
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 3.4e-61 240.0 340 44.1
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 7.5e-61 238.8 339 43.7
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 1.7e-60 237.7 356 43.5
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.7e-60 237.7 348 43.1
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 2.9e-60 236.9 357 43.1
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 1.4e-59 234.6 348 42.5
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 1.4e-59 234.6 356 43.0
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 1.9e-59 234.2 354 45.5
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 3.2e-59 233.4 382 43.5
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 2.1e-58 230.7 409 39.1
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 1.7e-57 227.6 442 37.6
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 7.3e-56 222.2 204 58.8
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 3.1e-54 216.9 346 40.8
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 6.8e-54 215.7 431 38.5
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 2.6e-53 213.8 377 39.5
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 4.4e-53 213.0 376 41.5
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.8e-53 212.6 339 41.0
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.1e-51 206.5 420 41.0
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 1.0e-49 201.8 128 75.8
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 2.3e-49 200.7 273 45.8
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.2e-47 194.9 176 51.1
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 1.4e-46 191.4 178 51.7
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 8.9e-46 188.7 185 49.2
CiPaw.16G073400 Carya illinoinensis HOM05D006487 ORTHO05D007982 6.0e-42 176.0 356 37.9
Cfa017861 Carpinus fangiana HOM05D006487 ORTHO05D007982 1.3e-41 174.9 301 41.5
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.5e-40 171.4 394 31.2
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.9e-40 171.0 125 66.4
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 7.3e-40 169.1 149 51.7
Hma1.2p1_0989F.1_g244830 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.5e-37 161.4 189 49.2
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.4e-37 160.2 126 64.3
Aa31LG10G5380 Aethionema arabicum HOM05D006487 ORTHO05D007982 2.7e-34 150.6 251 39.4
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.9e-27 127.9 118 57.6
Prupe.2G315400 Prunus persica HOM05D006487 ORTHO05D007982 3.0e-25 120.6 165 43.0
CSS0035874 Camellia sinensis var. sinensis HOM05D006487 ORTHO05D007982 3.1e-22 110.5 324 34.0
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 9.0e-22 109.0 174 37.9
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 3.8e-20 103.6 188 35.1
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 1.4e-19 101.7 137 39.4
TPR.G27400 Trifolium pratense HOM05D006487 ORTHO05D007982 4.2e-19 100.1 78 67.9
Ca_30285_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 4.6e-18 96.7 213 39.9
Ah.14g085790 Amaranthus hybridus HOM05D006487 ORTHO05D007982 6.7e-17 92.8 71 70.4
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 2.8e-15 87.4 208 33.7
ECA232G2176 Erigeron canadensis HOM05D006487 ORTHO05D007982 1.7e-12 78.2 275 31.6


User provided reference genes

Program Settings