Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g08010 Coffea canephora HOM05D007643 ORTHO05D007801 1.1e-69 266.5 142 100.0
MSTRG.9860 Avicennia marina HOM05D007643 ORTHO05D007801 2.0e-18 96.3 142 44.4
Migut.G00548 Erythranthe guttata HOM05D007643 ORTHO05D007801 4.5e-18 95.1 159 42.1
SGA_v2.0_scaffold67G22694 Striga asiatica HOM05D007643 ORTHO05D007801 4.5e-18 95.1 91 51.6
Oeu059396.1 Olea europaea HOM05D007643 ORTHO05D007801 2.9e-17 92.4 91 51.6
Nitab4.5_0000646g0290 Nicotiana tabacum HOM05D007643 ORTHO05D007801 4.2e-16 88.6 141 41.8
MSTRG.4170 Avicennia marina HOM05D007643 ORTHO05D007801 2.1e-15 86.3 94 46.8
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 2.1e-15 86.3 98 48.0
PGSC0003DMG400024520 Solanum tuberosum HOM05D007643 ORTHO05D007801 3.6e-15 85.5 145 40.0
unitig_746.g26846 Utricularia gibba HOM05D007643 ORTHO05D007801 4.7e-15 85.1 93 47.3
Nitab4.5_0002805g0050 Nicotiana tabacum HOM05D007643 ORTHO05D007801 3.0e-14 82.4 142 39.4
CAN.G982.32 Capsicum annuum HOM05D007643 ORTHO05D007801 5.2e-14 81.6 140 37.9
Sopen03g033740 Solanum pennellii HOM05D007643 ORTHO05D007801 3.4e-13 79.0 146 38.4
Lsat_1_v5_gn_4_112541 Lactuca sativa HOM05D007643 ORTHO05D007801 4.4e-13 78.6 98 41.8
Peaxi162Scf00017g03267 Petunia axillaris HOM05D007643 ORTHO05D007801 7.5e-13 77.8 93 41.9
Nitab4.5_0004190g0030 Nicotiana tabacum HOM05D007643 ORTHO05D007801 9.8e-13 77.4 90 44.4
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.3e-12 77.0 143 39.2
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 2.8e-12 75.9 102 42.2
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 6.3e-12 74.7 140 37.1
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 8.3e-12 74.3 107 44.9
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 1.8e-11 73.2 142 39.4
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 5.4e-11 71.6 147 37.4
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 7.0e-11 71.2 141 39.7
Nitab4.5_0002449g0120 Nicotiana tabacum HOM05D007643 ORTHO05D007801 9.2e-11 70.9 89 40.4
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.2e-10 70.5 143 37.1
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 1.6e-10 70.1 147 39.5
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.5e-10 68.6 141 39.7
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 4.5e-10 68.6 150 39.3
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 7.8e-10 67.8 148 36.5
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 1.3e-09 67.0 146 34.2
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.3e-09 67.0 134 38.8
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 1.7e-09 66.6 134 35.8
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 1.7e-09 66.6 131 38.9
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.3e-09 66.2 143 38.5
CSS0044770 Camellia sinensis var. sinensis HOM05D007643 ORTHO05D007801 3.8e-09 65.5 90 43.3
AUR62032152 Chenopodium quinoa HOM05D007643 ORTHO05D007801 6.6e-09 64.7 55 52.7
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 6.6e-09 64.7 95 38.9
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 6.6e-09 64.7 143 37.8
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 6.6e-09 64.7 130 36.9
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 6.6e-09 64.7 114 39.5
AUR62039686 Chenopodium quinoa HOM05D007643 ORTHO05D007801 1.1e-08 63.9 73 46.6
CANSAT11G0293 Cannabis sativa HOM05D007643 ORTHO05D007801 1.5e-08 63.5 87 40.2
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 1.5e-08 63.5 141 36.2
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 3.3e-08 62.4 144 34.0
MD06G1206900 Malus domestica HOM05D007643 ORTHO05D007801 3.3e-08 62.4 149 36.2
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.6e-08 61.6 97 37.1
MD14G1217500 Malus domestica HOM05D007643 ORTHO05D007801 5.6e-08 61.6 129 34.9
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 7.3e-08 61.2 120 35.0
GSVIVG01008172001 Vitis vinifera HOM05D007643 ORTHO05D007801 7.3e-08 61.2 158 31.6
Lalb_Chr23g0273871 Lupinus albus HOM05D007643 ORTHO05D007801 1.2e-07 60.5 133 30.8
ECA232G2778 Erigeron canadensis HOM05D007643 ORTHO05D007801 1.6e-07 60.1 97 35.1
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 2.1e-07 59.7 124 33.9
SEGI_00634 Sequoiadendron giganteum HOM05D007643 ORTHO05D007801 2.8e-07 59.3 108 36.1
Solyc06g069350.3 Solanum lycopersicum HOM05D007643 ORTHO05D007801 3.6e-07 58.9 82 42.7
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 3.6e-07 58.9 118 38.1
Psat1g029200 Pisum sativum HOM05D007643 ORTHO05D007801 6.1e-07 58.2 124 32.3
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 1.0e-06 57.4 127 33.9
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 2.3e-06 56.2 110 37.3
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.0e-06 55.8 130 33.1
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 4.0e-06 55.5 130 33.1
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 4.0e-06 55.5 107 38.3
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 5.2e-06 55.1 140 33.6


User provided reference genes

Program Settings