Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g07760 Coffea canephora HOM05D007960 ORTHO05D010026 1.8e-60 235.7 116 100.0
Hma1.2p1_0340F.1_g130110 Hydrangea macrophylla HOM05D007960 ORTHO05D010026 5.2e-20 101.3 119 52.9
TAR371G0138 Trochodendron aralioides HOM05D007960 ORTHO05D010026 2.0e-19 99.4 117 53.8
Nn3g17652 Nelumbo nucifera HOM05D007960 ORTHO05D010026 7.5e-19 97.4 115 51.3
Solyc03g114430.1 Solanum lycopersicum HOM05D007960 ORTHO05D010026 1.1e-17 93.6 118 48.3
Psat1g027680 Pisum sativum HOM05D007960 ORTHO05D010026 1.8e-17 92.8 94 48.9
QL10p022177 Quercus lobata HOM05D007960 ORTHO05D010026 5.3e-17 91.3 121 44.6
Medtr2g056070 Medicago truncatula HOM05D007960 ORTHO05D010026 1.2e-16 90.1 87 52.9
Sopen03g033530 Solanum pennellii HOM05D007960 ORTHO05D010026 1.0e-15 87.0 118 45.8
PGSC0003DMG400041876 Solanum tuberosum HOM05D007960 ORTHO05D010026 2.2e-15 85.9 118 48.3
Nitab4.5_0004342g0110 Nicotiana tabacum HOM05D007960 ORTHO05D010026 3.8e-15 85.1 101 52.5
Ah.11g047280 Amaranthus hybridus HOM05D007960 ORTHO05D010026 6.5e-15 84.3 97 49.5
TPR.G31006 Trifolium pratense HOM05D007960 ORTHO05D010026 6.5e-15 84.3 115 42.6
Aa31LG4G4360 Aethionema arabicum HOM05D007960 ORTHO05D010026 1.9e-14 82.8 124 43.5
Rhsim11G0054500 Rhododendron simsii HOM05D007960 ORTHO05D010026 2.5e-14 82.4 85 50.6
Haze_18570 Corylus avellana HOM05D007960 ORTHO05D010026 3.2e-14 82.0 102 51.0
Sp5g29280 Schrenkiella parvula HOM05D007960 ORTHO05D010026 3.2e-14 82.0 131 45.8
Atru.chr9.701 Acer truncatum HOM05D007960 ORTHO05D010026 4.2e-14 81.6 110 49.1
CiPaw.15G122900 Carya illinoinensis HOM05D007960 ORTHO05D010026 5.5e-14 81.3 100 47.0
CARHR067210 Cardamine hirsuta HOM05D007960 ORTHO05D010026 1.2e-13 80.1 134 40.3
Haze_18568 Corylus avellana HOM05D007960 ORTHO05D010026 1.6e-13 79.7 103 49.5
Dinv38606 Davidia involucrata HOM05D000227 ORTHO05D001491 1.6e-13 79.7 86 57.0
Lj1g0016835 Lotus japonicus HOM05D007960 ORTHO05D010026 1.6e-13 79.7 79 54.4
Nitab4.5_0000646g0060 Nicotiana tabacum HOM05D007960 ORTHO05D010026 1.6e-13 79.7 101 51.5
Cpa.g.sc13.82 Carica papaya HOM05D007960 ORTHO05D010026 6.1e-13 77.8 114 46.5
Manes.01G022400 Manihot esculenta HOM05D007960 ORTHO05D010026 8.0e-13 77.4 85 52.9
Phvul.003G179700 Phaseolus vulgaris HOM05D007960 ORTHO05D010026 1.0e-12 77.0 89 49.4
Carub.0002s2086 Capsella rubella HOM05D007960 ORTHO05D010026 1.4e-12 76.6 105 49.5
BcaC08g46805 Brassica carinata HOM05D007960 ORTHO05D010026 1.8e-12 76.3 114 46.5
A07p39920 Brassica napus HOM05D007960 ORTHO05D010026 1.8e-12 76.3 114 46.5
BolC6t39852H Brassica oleracea HOM05D007960 ORTHO05D010026 1.8e-12 76.3 114 46.5
BraA07t31538Z Brassica rapa HOM05D007960 ORTHO05D010026 1.8e-12 76.3 114 46.5
Lalb_Chr13g0302531 Lupinus albus HOM05D007960 ORTHO05D010026 4.0e-12 75.1 72 58.3
AL2G33950 Arabidopsis lyrata HOM05D007960 ORTHO05D010026 5.2e-12 74.7 112 47.3
C06p48150 Brassica napus HOM05D007960 ORTHO05D010026 5.2e-12 74.7 114 45.6
Peaxi162Scf00017g03010 Petunia axillaris HOM05D007960 ORTHO05D001491 6.8e-12 74.3 93 48.4
VMungo1215G0525 Vigna mungo HOM05D007960 ORTHO05D010026 8.8e-12 73.9 97 47.4
BcaC08g46834 Brassica carinata HOM05D007960 ORTHO05D010026 1.2e-11 73.6 105 46.7
Glyma.17G123900 Glycine max HOM05D007960 ORTHO05D010026 1.2e-11 73.6 97 48.5
Rhsim08G0149000 Rhododendron simsii HOM05D007960 ORTHO05D010026 1.2e-11 73.6 103 42.7
PSO063G1775 Papaver somniferum HOM05D007960 ORTHO05D010026 1.5e-11 73.2 118 39.0
PSO782G5681 Papaver somniferum HOM05D007960 ORTHO05D010026 1.5e-11 73.2 123 38.2
Sc04g0003850 Simmondsia chinensis HOM05D007960 ORTHO05D010026 1.5e-11 73.2 107 47.7
Ca_02635_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.0e-11 72.8 63 55.6
Ca_30215_v3 Cicer arietinum L. HOM05D007960 ORTHO05D010026 2.0e-11 72.8 63 55.6
Thhalv10019432m.g Eutrema salsugineum HOM05D007960 ORTHO05D010026 2.0e-11 72.8 113 46.0
Thecc.03G114600 Theobroma cacao HOM05D007960 ORTHO05D010026 3.4e-11 72.0 92 45.7
AT1G74055 Arabidopsis thaliana HOM05D007960 ORTHO05D010026 4.4e-11 71.6 112 46.4
THA.LOC104812118 Tarenaya hassleriana HOM05D007960 ORTHO05D010026 4.4e-11 71.6 101 45.5
Cfa019847 Carpinus fangiana HOM05D007960 ORTHO05D010026 7.5e-11 70.9 97 47.4
Ciclev10024471m.g Citrus clementina HOM05D007960 ORTHO05D010026 2.2e-10 69.3 119 37.8
Gohir.D03G100500 Gossypium hirsutum HOM05D007960 ORTHO05D010026 2.2e-10 69.3 99 44.4
Gorai.003G106000 Gossypium raimondii HOM05D007960 ORTHO05D010026 2.2e-10 69.3 99 44.4
MD14G1219300 Malus domestica HOM05D007960 ORTHO05D010026 2.2e-10 69.3 82 50.0
RcHm_v2.0_Chr7g0184281 Rosa chinensis HOM05D007960 ORTHO05D010026 2.2e-10 69.3 107 45.8
Sc04g0003840 Simmondsia chinensis HOM05D007960 ORTHO05D010026 2.2e-10 69.3 107 46.7
Glyma.05G015600 Glycine max HOM05D007960 ORTHO05D010026 3.7e-10 68.6 88 47.7
Gohir.A03G074200 Gossypium hirsutum HOM05D007960 ORTHO05D010026 4.8e-10 68.2 120 37.5
Aqoxy3G03839 Aquilegia oxysepala HOM05D007960 ORTHO05D010026 6.3e-10 67.8 100 44.0
BraA07t30596Z Brassica rapa HOM05D007960 ORTHO05D010026 8.3e-10 67.4 109 38.5
Lalb_Chr12g0197501 Lupinus albus HOM05D007960 ORTHO05D010026 1.8e-09 66.2 83 49.4
Sc04g0003950 Simmondsia chinensis HOM05D007960 ORTHO05D010026 4.1e-09 65.1 106 45.3
Prupe.5G214000 Prunus persica HOM05D007960 ORTHO05D010026 1.6e-08 63.2 113 41.6
Actinidia16062 Actinidia chinensis HOM05D000227 ORTHO05D001491 2.0e-08 62.8 68 44.1
EL10Ac5g11226 Beta vulgaris HOM05D007960 ORTHO05D010026 2.0e-08 62.8 110 39.1
ClCG04G011400 Citrullus lanatus HOM05D007960 ORTHO05D010026 3.5e-08 62.0 97 39.2
FAN18G0932 Fragaria x ananassa HOM05D000227 ORTHO05D001491 3.5e-08 62.0 89 46.1
CANSAT80G0727 Cannabis sativa HOM05D007960 ORTHO05D010026 5.9e-08 61.2 110 40.9
Dinv36868 Davidia involucrata HOM05D007960 ORTHO05D010026 7.7e-08 60.8 122 41.0
FAN13G1649 Fragaria x ananassa HOM05D000227 ORTHO05D001491 1.0e-07 60.5 89 46.1
Sed0018526 Sechium edule HOM05D007960 ORTHO05D010026 3.8e-07 58.5 87 46.0
Lsat_1_v5_gn_1_15660 Lactuca sativa HOM05D007960 ORTHO05D010026 1.1e-06 57.0 93 40.9
AUR62036925 Chenopodium quinoa HOM05D007960 ORTHO05D010026 1.5e-06 56.6 43 53.5
ATR0730G198 Amborella trichopoda HOM05D007960 ORTHO05D010026 1.9e-06 56.2 86 36.0
BcaC08g45611 Brassica carinata HOM05D007960 ORTHO05D010026 2.5e-06 55.8 66 43.9
ECA247G3950 Erigeron canadensis HOM05D007960 ORTHO05D010026 4.2e-06 55.1 117 36.8
PGR044G2003 Punica granatum HOM05D007960 ORTHO05D010026 5.5e-06 54.7 73 39.7
Hma1.2p1_0584F.1_g183120 Hydrangea macrophylla HOM05D002914 ORTHO05D003196 7.2e-06 54.3 108 38.9


User provided reference genes

Program Settings