Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g07530 Coffea canephora HOM05D000034 ORTHO05D000037 1.2e-32 142.5 68 100.0
Cc06_g20430 Coffea canephora HOM05D000034 ORTHO05D000037 2.7e-13 78.2 42 83.3
Cc02_g10140 Coffea canephora HOM05D000034 ORTHO05D000037 4.0e-12 74.3 40 82.5
Cc08_g05390 Coffea canephora HOM05D000034 ORTHO05D000037 9.8e-11 69.7 42 73.8
A10p28310 Brassica napus HOM05D000034 ORTHO05D000037 6.6e-07 57.0 42 59.5
C09p68570 Brassica napus HOM05D000034 ORTHO05D000037 8.6e-07 56.6 42 59.5
BolC9t59599H Brassica oleracea HOM05D003684 ORTHO05D004428 8.6e-07 56.6 42 59.5
CSS0001254 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0001522 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0002925 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0004838 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0009060 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0010359 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0015900 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0037429 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
CSS0041293 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.6e-07 56.6 41 53.7
BcaB08g37260 Brassica carinata HOM05D000034 ORTHO05D000037 1.9e-06 55.5 41 58.5
Cc07_g19560 Coffea canephora HOM05D000034 ORTHO05D000037 1.9e-06 55.5 41 58.5
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 1.9e-06 55.5 40 57.5
AUR62013970 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.5e-06 55.1 41 56.1
CANSAT01G0970 Cannabis sativa HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 53.7
CANSAT25G1047 Cannabis sativa HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 53.7
CANSAT25G2314 Cannabis sativa HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 53.7
CANSAT54G2552 Cannabis sativa HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 53.7
Cc00_g12350 Coffea canephora HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 61.0
Rhsim11G0185300 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 51.2
Rhsim12G0067000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.3e-06 54.7 41 51.2
AUR62009858 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.2e-06 54.3 41 58.5
AUR62020230 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.2e-06 54.3 41 58.5
CSS0027652 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.5e-06 53.9 44 47.7
CSS0040542 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.5e-06 53.9 44 47.7
AUR62033764 Chenopodium quinoa HOM05D000876 ORTHO05D000285 7.2e-06 53.5 40 55.0
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 7.2e-06 53.5 41 51.2
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 7.2e-06 53.5 41 51.2
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 7.2e-06 53.5 41 51.2
Hma1.2p1_0729F.1_g209640 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 9.5e-06 53.1 41 51.2
Sp6g34460 Schrenkiella parvula HOM05D000034 ORTHO05D000037 9.5e-06 53.1 41 56.1


User provided reference genes

Program Settings