Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g07230 Coffea canephora HOM05D006290 ORTHO05D007734 2.6e-43 178.3 91 100.0
Solyc12g150113.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 1.6e-16 89.4 89 55.1
PGSC0003DMG400021769 Solanum tuberosum HOM05D006290 ORTHO05D007734 1.6e-16 89.4 89 52.8
Sopen12g017530 Solanum pennellii HOM05D006290 ORTHO05D007734 2.1e-16 89.0 89 53.9
Peaxi162Scf00634g00115 Petunia axillaris HOM05D006290 ORTHO05D007734 1.4e-15 86.3 83 56.6
Migut.I00370 Erythranthe guttata HOM05D006290 ORTHO05D007734 8.8e-15 83.6 88 48.9
CAN.G257.59 Capsicum annuum HOM05D006290 ORTHO05D007734 1.9e-14 82.4 84 48.8
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 7.4e-14 80.5 88 44.3
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.2e-11 73.2 78 46.2
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 2.0e-11 72.4 85 44.7
Cfa019791 Carpinus fangiana HOM05D006108 ORTHO05D007605 3.4e-11 71.6 82 47.6
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 5.9e-11 70.9 77 45.5
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 1.3e-10 69.7 85 41.2
Potri.015G053600 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.3e-10 69.7 86 45.3
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.7e-10 69.3 77 45.5
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 5.0e-10 67.8 81 43.2
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 5.0e-10 67.8 77 45.5
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 6.5e-10 67.4 80 40.0
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 6.5e-10 67.4 80 40.0
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 8.5e-10 67.0 69 46.4
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 1.1e-09 66.6 69 43.5
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 1.1e-09 66.6 84 40.5
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 1.4e-09 66.2 83 41.0
COL.COLO4_04669 Corchorus olitorius HOM05D006290 ORTHO05D007734 1.9e-09 65.9 84 45.2
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 1.9e-09 65.9 70 42.9
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 1.9e-09 65.9 78 46.2
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 2.5e-09 65.5 84 39.3
Thecc.03G033500 Theobroma cacao HOM05D006290 ORTHO05D007734 3.2e-09 65.1 82 46.3
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 4.2e-09 64.7 48 56.2
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 5.5e-09 64.3 85 41.2
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 5.5e-09 64.3 64 48.4
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 7.2e-09 63.9 80 38.8
MD06G1215000 Malus domestica HOM05D006290 ORTHO05D007734 1.2e-08 63.2 92 37.0
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 1.6e-08 62.8 85 41.2
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 1.6e-08 62.8 69 42.0
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 2.1e-08 62.4 77 41.6
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 2.7e-08 62.0 88 37.5
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 2.7e-08 62.0 78 42.3
Nitab4.5_0009642g0010 Nicotiana tabacum HOM05D006290 ORTHO05D007734 2.7e-08 62.0 69 46.4
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 3.6e-08 61.6 80 41.2
Manes.05G141953 Manihot esculenta HOM05D006290 ORTHO05D007734 3.6e-08 61.6 86 44.2
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 4.7e-08 61.2 81 39.5
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 6.1e-08 60.8 74 40.5
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 6.1e-08 60.8 85 38.8
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 1.0e-07 60.1 78 39.7
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 1.0e-07 60.1 78 37.2
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 1.4e-07 59.7 66 42.4
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 2.3e-07 58.9 66 43.9
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 3.0e-07 58.5 72 44.4
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 3.0e-07 58.5 72 38.9
Ciclev10023118m.g Citrus clementina HOM05D006290 ORTHO05D007734 3.0e-07 58.5 49 55.1
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 5.1e-07 57.8 60 45.0
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 6.7e-07 57.4 74 35.1
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 6.7e-07 57.4 78 38.5
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 6.7e-07 57.4 68 42.6
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 8.8e-07 57.0 78 37.2
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 1.1e-06 56.6 48 47.9
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 1.1e-06 56.6 78 38.5
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 1.1e-06 56.6 77 37.7
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 1.5e-06 56.2 64 45.3
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 2.0e-06 55.8 47 53.2
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 2.0e-06 55.8 60 43.3
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 2.6e-06 55.5 86 41.9
Sed0022191 Sechium edule HOM05D006290 ORTHO05D007734 3.3e-06 55.1 47 46.8
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 3.3e-06 55.1 66 43.9
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 5.7e-06 54.3 69 40.6
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 5.7e-06 54.3 79 39.2
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 7.4e-06 53.9 45 48.9
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.4e-06 53.9 44 50.0
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.4e-06 53.9 44 50.0
TWI15G1195 Tripterygium wilfordii HOM05D006108 ORTHO05D007605 7.4e-06 53.9 42 52.4
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 9.7e-06 53.5 71 35.2
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 9.7e-06 53.5 71 42.3
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 9.7e-06 53.5 49 53.1
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 9.7e-06 53.5 69 42.0


User provided reference genes

Program Settings