Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g06140 Coffea canephora HOM05D006794 ORTHO05D008322 8.4e-98 360.5 206 100.0
Sopen03g037580 Solanum pennellii HOM05D006794 ORTHO05D008322 6.1e-56 221.5 203 72.4
Solyc03g118630.3 Solanum lycopersicum HOM05D006794 ORTHO05D008322 3.0e-55 219.2 203 70.9
QL10p030576 Quercus lobata HOM05D006794 ORTHO05D008322 3.1e-52 209.1 204 61.8
PGSC0003DMG400005675 Solanum tuberosum HOM05D006794 ORTHO05D008322 4.1e-52 208.8 206 70.4
CiPaw.15G144200 Carya illinoinensis HOM05D006794 ORTHO05D008322 5.3e-52 208.4 206 61.7
Nitab4.5_0001264g0020 Nicotiana tabacum HOM05D006794 ORTHO05D008322 1.1e-49 200.7 209 67.0
Cpa.g.sc3.383 Carica papaya HOM05D006794 ORTHO05D008322 1.2e-48 197.2 201 68.2
CiPaw.16G095900 Carya illinoinensis HOM05D006794 ORTHO05D008322 2.1e-48 196.4 203 58.1
Thecc.03G058000 Theobroma cacao HOM05D006794 ORTHO05D008322 6.1e-48 194.9 210 59.5
Duzib084G0148 Durio zibethinus HOM05D006794 ORTHO05D008322 1.0e-47 194.1 210 56.2
Cfa021396 Carpinus fangiana HOM05D006794 ORTHO05D008322 8.8e-47 191.0 211 63.0
Dinv08202 Davidia involucrata HOM05D006794 ORTHO05D008322 8.8e-47 191.0 202 68.8
Duzib068G0617 Durio zibethinus HOM05D006794 ORTHO05D008322 8.8e-47 191.0 210 57.6
Oeu046160.1 Olea europaea HOM05D006794 ORTHO05D008322 9.7e-46 187.6 203 57.6
ClCG04G010570 Citrullus lanatus HOM05D006794 ORTHO05D008322 2.8e-45 186.0 201 61.2
FAN13G2800 Fragaria x ananassa HOM05D006794 ORTHO05D008322 7.0e-44 181.4 201 62.2
Hma1.2p1_0163F.1_g073020 Hydrangea macrophylla HOM05D006794 ORTHO05D008322 7.0e-44 181.4 202 66.8
CSS0048798 Camellia sinensis var. sinensis HOM05D006794 ORTHO05D008322 2.0e-43 179.9 202 66.8
GSVIVG01008463001 Vitis vinifera HOM05D006794 ORTHO05D008322 5.9e-43 178.3 201 58.2
PGR083G0475 Punica granatum HOM05D006794 ORTHO05D008322 1.3e-42 177.2 205 64.4
Phvul.004G150000 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 1.7e-42 176.8 200 65.5
TWI81G0550 Tripterygium wilfordii HOM05D006794 ORTHO05D008322 3.8e-42 175.6 207 58.5
VMungo0464G2014 Vigna mungo HOM05D006794 ORTHO05D008322 3.8e-42 175.6 200 65.0
Atru.chr9.1672 Acer truncatum HOM05D006794 ORTHO05D008322 5.0e-42 175.3 207 54.1
FvH4_5g17460 Fragaria vesca HOM05D006794 ORTHO05D008322 5.0e-42 175.3 201 65.2
FAN18G3906 Fragaria x ananassa HOM05D006794 ORTHO05D008322 5.0e-42 175.3 201 65.2
Glyma.09G174700 Glycine max HOM05D006794 ORTHO05D008322 5.0e-42 175.3 200 64.5
Lj2g0023485 Lotus japonicus HOM05D006794 ORTHO05D008322 5.0e-42 175.3 202 63.9
Sed0024550 Sechium edule HOM05D006794 ORTHO05D008322 8.5e-42 174.5 203 63.5
Gorai.008G290400 Gossypium raimondii HOM05D006794 ORTHO05D008322 1.1e-41 174.1 212 55.2
Medtr6g069830 Medicago truncatula HOM05D006794 ORTHO05D008322 2.5e-41 172.9 202 62.4
RcHm_v2.0_Chr7g0178231 Rosa chinensis HOM05D006794 ORTHO05D008322 3.2e-41 172.6 201 64.7
Migut.D01320 Erythranthe guttata HOM05D006794 ORTHO05D008322 5.5e-41 171.8 196 55.6
Glyma.08G055100 Glycine max HOM05D006794 ORTHO05D008322 5.5e-41 171.8 201 64.2
Lalb_Chr16g0386961 Lupinus albus HOM05D006794 ORTHO05D008322 5.5e-41 171.8 199 54.8
TPR.G8635 Trifolium pratense HOM05D006794 ORTHO05D008322 5.5e-41 171.8 202 63.9
CANSAT80G2635 Cannabis sativa HOM05D006794 ORTHO05D008322 7.2e-41 171.4 216 60.6
arahy.Tifrunner.gnm1.ann1.KQ26AL Arachis hypogaea HOM05D006794 ORTHO05D008322 1.6e-40 170.2 201 54.2
arahy.Tifrunner.gnm1.ann1.P2R0G6 Arachis hypogaea HOM05D006794 ORTHO05D008322 1.6e-40 170.2 201 54.2
Lalb_Chr22g0353521 Lupinus albus HOM05D006794 ORTHO05D008322 2.1e-40 169.9 204 61.8
arahy.Tifrunner.gnm1.ann1.PNUX28 Arachis hypogaea HOM05D006794 ORTHO05D008322 3.6e-40 169.1 207 64.3
Phvul.002G330800 Phaseolus vulgaris HOM05D006794 ORTHO05D008322 3.6e-40 169.1 201 64.2
arahy.Tifrunner.gnm1.ann1.AT27RE Arachis hypogaea HOM05D006794 ORTHO05D008322 4.7e-40 168.7 207 64.3
MD06G1228000 Malus domestica HOM05D006794 ORTHO05D008322 6.1e-40 168.3 201 62.7
VMungo0251G1205 Vigna mungo HOM05D006794 ORTHO05D008322 6.1e-40 168.3 201 64.2
MD14G1237200 Malus domestica HOM05D006794 ORTHO05D008322 1.0e-39 167.5 205 62.9
Prupe.5G234500 Prunus persica HOM05D006794 ORTHO05D008322 1.0e-39 167.5 206 63.1
CANSAT80G0659 Cannabis sativa HOM05D006794 ORTHO05D008322 1.4e-39 167.2 216 59.7
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 1.8e-39 166.8 201 61.2
Sabra15G0031400 Salix brachista HOM05D006794 ORTHO05D008322 4.4e-38 162.2 212 55.7
Potri.012G045700 Populus trichocarpa HOM05D006794 ORTHO05D008322 9.8e-38 161.0 213 61.5
Eucgr.B00988 Eucalyptus grandis HOM05D006794 ORTHO05D008322 4.8e-37 158.7 201 60.7
FAN08G0189 Fragaria x ananassa HOM05D006794 ORTHO05D008322 4.8e-37 158.7 201 61.7
FAN04G0930 Fragaria x ananassa HOM05D006794 ORTHO05D008322 6.3e-37 158.3 201 61.7
TAR622G0128 Trochodendron aralioides HOM05D006794 ORTHO05D008322 6.3e-37 158.3 201 61.2
Potri.015G036900 Populus trichocarpa HOM05D006794 ORTHO05D008322 3.1e-36 156.0 214 60.3
Psat4g000080 Pisum sativum HOM05D006794 ORTHO05D008322 7.0e-36 154.8 202 52.0
Manes.06G005000 Manihot esculenta HOM05D006794 ORTHO05D008322 1.6e-35 153.7 203 53.2
THA.LOC104825595 Tarenaya hassleriana HOM05D006794 ORTHO05D008322 1.0e-34 151.0 207 50.2
Lsat_1_v5_gn_5_175480 Lactuca sativa HOM05D006794 ORTHO05D008322 2.3e-34 149.8 210 56.2
Nitab4.5_0010223g0030 Nicotiana tabacum HOM05D006794 ORTHO05D008322 1.1e-33 147.5 209 56.5
Sp3g16080 Schrenkiella parvula HOM05D006794 ORTHO05D008322 4.2e-33 145.6 223 48.0
Nn4g24277 Nelumbo nucifera HOM05D006794 ORTHO05D008322 9.5e-33 144.4 212 50.5
A03p40470 Brassica napus HOM05D006794 ORTHO05D008322 1.6e-32 143.7 219 50.7
BcaC09g48759 Brassica carinata HOM05D006794 ORTHO05D008322 2.8e-32 142.9 227 48.0
C01p46200 Brassica napus HOM05D006794 ORTHO05D008322 2.8e-32 142.9 227 48.0
BolC1t04582H Brassica oleracea HOM05D006794 ORTHO05D008322 2.8e-32 142.9 227 48.0
MD01G1007300 Malus domestica HOM05D006794 ORTHO05D008322 2.8e-32 142.9 194 49.0
PSO210G4985 Papaver somniferum HOM05D006794 ORTHO05D008322 2.8e-32 142.9 222 45.9
BcaC01g03720 Brassica carinata HOM05D006794 ORTHO05D008322 4.7e-32 142.1 220 53.6
DCAR_013026 Daucus carota HOM05D006794 ORTHO05D008322 4.7e-32 142.1 203 56.2
PSO832G1236 Papaver somniferum HOM05D006794 ORTHO05D008322 8.0e-32 141.4 222 45.5
C03p49310 Brassica napus HOM05D006794 ORTHO05D008322 1.0e-31 141.0 220 52.7
HanXRQChr01g0012541 Helianthus annuus HOM05D006794 ORTHO05D008322 4.0e-31 139.0 216 57.9
BcaB04g18974 Brassica carinata HOM05D006794 ORTHO05D008322 2.6e-30 136.3 217 53.0
Thhalv10021515m.g Eutrema salsugineum HOM05D006794 ORTHO05D008322 5.7e-30 135.2 220 55.9
BcaB04g20803 Brassica carinata HOM05D006794 ORTHO05D008322 2.2e-29 133.3 215 52.6
BraA01t03709Z Brassica rapa HOM05D006794 ORTHO05D008322 2.4e-28 129.8 216 52.3
A01p36460 Brassica napus HOM05D006794 ORTHO05D008322 4.1e-28 129.0 219 52.1
Lj4g0014763 Lotus japonicus HOM05D006794 ORTHO05D008322 1.2e-27 127.5 208 46.2
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 1.6e-27 127.1 177 60.5
AL3G31120 Arabidopsis lyrata HOM05D006794 ORTHO05D008322 4.5e-27 125.6 207 55.6
Carub.0003s1768 Capsella rubella HOM05D006794 ORTHO05D008322 1.0e-26 124.4 213 54.0
MBI19_g22477_MAGBIO Magnolia biondii HOM05D006794 ORTHO05D008322 3.8e-26 122.5 203 49.3
SalBow1G0629 Salvia bowleyana HOM05D006794 ORTHO05D008322 2.1e-24 116.7 185 56.2
ECA248G0187 Erigeron canadensis HOM05D006794 ORTHO05D008322 2.8e-24 116.3 214 51.9
MELO3C002138.2 Cucumis melo HOM05D006794 ORTHO05D008322 1.0e-23 114.4 157 56.7
Haze_18880 Corylus avellana HOM05D006794 ORTHO05D008322 4.0e-23 112.5 170 54.1
vmacro16409 Vaccinium macrocarpon HOM05D006794 ORTHO05D008322 8.9e-23 111.3 181 55.8
COL.COLO4_04996 Corchorus olitorius HOM05D006794 ORTHO05D008322 9.8e-22 107.8 169 58.0
CANSAT64G0030 Cannabis sativa HOM05D006794 ORTHO05D008322 1.4e-20 104.0 168 48.8
Peaxi162Scf00314g00315 Petunia axillaris HOM05D006794 ORTHO05D008322 7.0e-20 101.7 159 56.0
Psat1g031080 Pisum sativum HOM05D006794 ORTHO05D008322 7.8e-19 98.2 160 55.6
HPP92_008000 Vanilla planifolia HOM05D006794 ORTHO05D008322 2.3e-18 96.7 209 42.6
Glyma.07G103100 Glycine max HOM05D006794 ORTHO05D008322 3.9e-18 95.9 156 55.1
Gohir.A12G269600 Gossypium hirsutum HOM05D006794 ORTHO05D008322 5.0e-18 95.5 168 44.6
Ca_25344_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 8.6e-18 94.7 158 57.0
Gohir.D12G270100 Gossypium hirsutum HOM05D006794 ORTHO05D008322 8.6e-18 94.7 168 44.6
CARHR093280 Cardamine hirsuta HOM05D006794 ORTHO05D008322 1.5e-17 94.0 188 50.5
Ca_17183_v3 Cicer arietinum L. HOM05D006794 ORTHO05D008322 1.9e-17 93.6 93 60.2
Sabra12G0031800 Salix brachista HOM05D006794 ORTHO05D008322 1.1e-15 87.8 169 55.0
Ciclev10009814m.g Citrus clementina HOM05D006794 ORTHO05D008322 2.0e-14 83.6 149 50.3
SGA_v2.0_scaffold172G39018 Striga asiatica HOM05D006794 ORTHO05D008322 9.8e-14 81.3 150 40.7
CDE05G2986 Ceratophyllum demersum HOM05D006794 ORTHO05D008322 3.7e-13 79.3 172 36.0
Oeu004474.1 Olea europaea HOM05D006794 ORTHO05D008322 8.3e-13 78.2 86 57.0
Aa31LG8G4820 Aethionema arabicum HOM05D006794 ORTHO05D008322 1.9e-12 77.0 197 35.5
AT3G17950 Arabidopsis thaliana HOM05D006794 ORTHO05D008322 3.2e-12 76.3 181 49.2
C05p26280 Brassica napus HOM05D006794 ORTHO05D008322 3.2e-12 76.3 97 53.6
CDE07G1050 Ceratophyllum demersum HOM05D006794 ORTHO05D008322 3.9e-10 69.3 65 64.6
Potri.001G238900 Populus trichocarpa HOM05D003527 ORTHO05D004099 1.9e-09 67.0 168 35.1
SEGI_38129 Sequoiadendron giganteum HOM05D003527 ORTHO05D004099 2.5e-09 66.6 171 33.3
Nn2g15270 Nelumbo nucifera HOM05D006794 ORTHO05D008322 4.3e-09 65.9 130 38.5
QL01p032299 Quercus lobata HOM05D003527 ORTHO05D004099 4.3e-09 65.9 170 32.9
CiPaw.13G095400 Carya illinoinensis HOM05D003527 ORTHO05D004099 1.2e-08 64.3 174 32.8
Manes.04G034300 Manihot esculenta HOM05D003527 ORTHO05D004099 6.2e-08 62.0 180 35.0
HanXRQChr05g0134511 Helianthus annuus HOM05D003527 ORTHO05D004099 1.8e-07 60.5 172 34.3
Ciclev10029234m.g Citrus clementina HOM05D003527 ORTHO05D004099 3.1e-07 59.7 183 31.1
Gohir.D05G096200 Gossypium hirsutum HOM05D003527 ORTHO05D004099 5.2e-07 58.9 162 32.7
Gorai.009G099700 Gossypium raimondii HOM05D003527 ORTHO05D004099 5.2e-07 58.9 162 32.7
Nitab4.5_0001800g0180 Nicotiana tabacum HOM05D003527 ORTHO05D004099 5.2e-07 58.9 162 33.3
Prupe.6G079000 Prunus persica HOM05D003527 ORTHO05D004099 5.2e-07 58.9 168 31.0
Lsat_1_v5_gn_9_23221 Lactuca sativa HOM05D003527 ORTHO05D004099 8.9e-07 58.2 176 32.4
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 8.9e-07 58.2 125 36.8
Actinidia23946 Actinidia chinensis HOM05D003527 ORTHO05D004099 1.2e-06 57.8 132 38.6
Dinv37181 Davidia involucrata HOM05D003527 ORTHO05D004099 1.2e-06 57.8 158 32.3
Sabra16G0144000 Salix brachista HOM05D003527 ORTHO05D004099 1.5e-06 57.4 165 33.9
Aqoxy2G02103 Aquilegia oxysepala HOM05D003527 ORTHO05D004099 2.6e-06 56.6 176 33.5
FAN25G2547 Fragaria x ananassa HOM05D003527 ORTHO05D004099 2.6e-06 56.6 167 33.5
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 2.6e-06 56.6 35 82.9
Sc12g0001550 Simmondsia chinensis HOM05D003527 ORTHO05D004099 2.6e-06 56.6 163 31.9
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 3.4e-06 56.2 57 54.4
Haze_24084 Corylus avellana HOM05D003527 ORTHO05D004099 3.4e-06 56.2 167 30.5
Duzib128G0537 Durio zibethinus HOM05D003527 ORTHO05D004099 3.4e-06 56.2 58 51.7
RcHm_v2.0_Chr5g0064221 Rosa chinensis HOM05D003527 ORTHO05D004099 3.4e-06 56.2 172 33.7
CANSAT35G0216 Cannabis sativa HOM05D003527 ORTHO05D004099 4.4e-06 55.8 36 75.0
Duzib168G1608 Durio zibethinus HOM05D003527 ORTHO05D004099 4.4e-06 55.8 166 32.5
Lsat_1_v5_gn_8_75920 Lactuca sativa HOM05D003527 ORTHO05D004099 4.4e-06 55.8 169 34.3
arahy.Tifrunner.gnm1.ann1.QZ6FSS Arachis hypogaea HOM05D003527 ORTHO05D004099 5.8e-06 55.5 160 35.0
CiPaw.09G191600 Carya illinoinensis HOM05D003527 ORTHO05D004099 5.8e-06 55.5 35 77.1
ECA236G2982 Erigeron canadensis HOM05D003527 ORTHO05D004099 5.8e-06 55.5 171 31.0
FAN16G0579 Fragaria x ananassa HOM05D003527 ORTHO05D004099 5.8e-06 55.5 163 32.5
QL07p048124 Quercus lobata HOM05D003527 ORTHO05D004099 5.8e-06 55.5 35 80.0
Hund04968 Selenicereus undatus HOM05D003527 ORTHO05D004099 5.8e-06 55.5 35 80.0
Atru.chr8.1727 Acer truncatum HOM05D006794 ORTHO05D008322 7.5e-06 55.1 57 50.9
Ah.08g219410 Amaranthus hybridus HOM05D003527 ORTHO05D004099 7.5e-06 55.1 35 80.0
EL10Ac7g16007 Beta vulgaris HOM05D003527 ORTHO05D004099 7.5e-06 55.1 35 80.0
Gorai.001G110200 Gossypium raimondii HOM05D003527 ORTHO05D004099 7.5e-06 55.1 184 30.4
Manes.11G131300 Manihot esculenta HOM05D003527 ORTHO05D004099 7.5e-06 55.1 176 31.8
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 7.5e-06 55.1 160 31.2
AUR62009585 Chenopodium quinoa HOM05D003527 ORTHO05D004099 9.9e-06 54.7 178 33.7
Migut.J00336 Erythranthe guttata HOM05D003527 ORTHO05D004099 9.9e-06 54.7 157 31.8
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 9.9e-06 54.7 168 32.1
Thecc.09G322900 Theobroma cacao HOM05D003527 ORTHO05D004099 9.9e-06 54.7 175 32.0


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