Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 9.8e-234 813.1 426 100.0
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 9.2e-99 364.8 463 47.3
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 8.1e-95 351.7 424 49.8
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 4.9e-92 342.4 424 49.8
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 7.8e-90 335.1 421 50.6
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 9.2e-83 311.6 425 46.4
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 1.2e-82 311.2 428 44.9
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 4.7e-79 299.3 418 44.7
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 1.8e-78 297.4 418 44.5
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.5e-77 294.3 415 45.5
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 5.8e-77 292.4 419 44.4
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 7.1e-75 285.4 436 45.0
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 7.1e-75 285.4 436 45.0
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 1.6e-74 284.3 392 45.2
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 7.8e-74 282.0 423 45.4
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 6.6e-73 278.9 427 42.2
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 1.5e-72 277.7 420 43.6
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 3.3e-72 276.6 423 44.0
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 5.6e-72 275.8 421 44.4
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 5.6e-72 275.8 368 46.5
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 9.6e-72 275.0 410 43.9
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 2.1e-71 273.9 429 42.9
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 8.1e-71 271.9 435 42.1
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 1.4e-70 271.2 423 43.3
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.8e-70 270.8 422 43.1
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 4.0e-70 269.6 427 43.1
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 4.9e-68 262.7 405 43.2
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 6.4e-68 262.3 421 42.0
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 1.6e-63 247.7 419 39.4
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.4e-62 243.8 425 39.8
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 5.3e-62 242.7 314 47.8
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 4.5e-61 239.6 395 40.3
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 6.4e-60 235.7 407 41.0
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.2e-59 233.4 320 44.4
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 3.2e-59 233.4 415 39.5
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 6.7e-57 225.7 407 39.8
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 3.3e-56 223.4 399 36.3
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 9.6e-56 221.9 412 36.7
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 9.6e-56 221.9 412 36.7
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 9.6e-56 221.9 412 36.7
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 1.6e-55 221.1 400 37.0
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 1.6e-55 221.1 410 35.4
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 3.7e-55 219.9 383 38.4
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 8.2e-55 218.8 423 36.2
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 6.9e-54 215.7 400 37.0
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 6.9e-54 215.7 400 36.8
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 6.9e-54 215.7 401 35.7
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 9.0e-54 215.3 413 36.3
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 3.4e-53 213.4 403 35.5
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 4.5e-53 213.0 401 36.2
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.9e-52 210.3 372 40.6
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 1.9e-51 207.6 204 57.8
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 1.8e-49 201.1 334 40.1
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 4.1e-46 189.9 457 33.0
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 3.4e-45 186.8 404 34.2
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 4.5e-45 186.4 372 37.6
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 4.2e-43 179.9 335 37.6
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 2.1e-42 177.6 397 32.7
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 1.5e-40 171.4 237 43.5
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.4e-38 164.1 385 35.1
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 7.0e-14 82.8 348 24.7
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 1.5e-08 65.1 82 46.3
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 1.4e-06 58.5 193 32.1


User provided reference genes

Program Settings