Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g05820 Coffea canephora HOM05D005199 ORTHO05D006277 5.5e-215 750.7 393 100.0
Sabra15G0129500 Salix brachista HOM05D005199 ORTHO05D006277 2.1e-158 562.8 397 75.8
CiPaw.12G000800 Carya illinoinensis HOM05D005199 ORTHO05D006277 2.8e-158 562.4 399 77.9
Sabra15G0127400 Salix brachista HOM05D005199 ORTHO05D006277 4.7e-158 561.6 397 75.6
Potri.015G106900 Populus trichocarpa HOM05D005199 ORTHO05D006277 1.4e-157 560.1 400 75.2
Manes.06G127100 Manihot esculenta HOM05D005199 ORTHO05D006277 4.0e-157 558.5 394 78.2
Cfa018703 Carpinus fangiana HOM05D005199 ORTHO05D006277 1.5e-156 556.6 400 74.2
QL10p000401 Quercus lobata HOM05D005199 ORTHO05D006277 1.3e-155 553.5 396 75.8
TWI39G0590 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 2.4e-154 549.3 389 75.3
Dinv13715 Davidia involucrata HOM05D005199 ORTHO05D006277 2.7e-153 545.8 388 77.6
Ciclev10033942m.g Citrus clementina HOM05D005199 ORTHO05D006277 1.1e-151 540.4 399 73.2
Haze_07093 Corylus avellana HOM05D005199 ORTHO05D006277 1.1e-151 540.4 400 75.0
Oeu013661.1 Olea europaea HOM05D005199 ORTHO05D006277 1.6e-150 536.6 401 74.1
MD06G1129500 Malus domestica HOM05D005199 ORTHO05D006277 6.2e-150 534.6 419 70.4
Peaxi162Scf00314g00633 Petunia axillaris HOM05D005199 ORTHO05D006277 6.2e-150 534.6 413 72.4
Medtr3g098560 Medicago truncatula HOM05D005199 ORTHO05D006277 8.1e-150 534.3 403 74.4
GSVIVG01008655001 Vitis vinifera HOM05D005199 ORTHO05D006277 1.1e-149 533.9 405 70.4
Atru.chr6.1926 Acer truncatum HOM05D005199 ORTHO05D006277 2.4e-149 532.7 395 74.9
Thecc.03G141200 Theobroma cacao HOM05D005199 ORTHO05D006277 2.4e-149 532.7 393 73.5
Sopen03g037080 Solanum pennellii HOM05D005199 ORTHO05D006277 6.9e-149 531.2 411 73.2
Ca_10877_v3 Cicer arietinum L. HOM05D005199 ORTHO05D006277 2.6e-148 529.3 404 73.3
Migut.I00669 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.6e-148 529.3 409 74.3
CSS0050347 Camellia sinensis var. sinensis HOM05D005199 ORTHO05D006277 4.4e-148 528.5 400 74.0
SalBow7G2845 Salvia bowleyana HOM05D005199 ORTHO05D006277 4.4e-148 528.5 398 73.6
Nn3g16267 Nelumbo nucifera HOM05D005199 ORTHO05D006277 1.3e-147 526.9 380 76.8
Dinv23231 Davidia involucrata HOM05D005199 ORTHO05D006277 1.7e-147 526.6 392 76.8
Psat5g056040 Pisum sativum HOM05D005199 ORTHO05D006277 1.7e-147 526.6 406 73.2
CAN.G843.7 Capsicum annuum HOM05D005199 ORTHO05D006277 1.9e-146 523.1 420 69.8
ECA232G4131 Erigeron canadensis HOM05D005199 ORTHO05D006277 2.4e-146 522.7 431 66.1
Duzib205G1536 Durio zibethinus HOM05D005199 ORTHO05D006277 1.6e-145 520.0 399 71.7
Manes.14G044200 Manihot esculenta HOM05D005199 ORTHO05D006277 4.6e-145 518.5 384 72.9
Prupe.5G140700 Prunus persica HOM05D005199 ORTHO05D006277 6.0e-145 518.1 417 69.1
SGA_v2.0_scaffold37G14675 Striga asiatica HOM05D005199 ORTHO05D006277 6.0e-145 518.1 396 73.0
Hma1.2p1_0577F.1_g182220 Hydrangea macrophylla HOM05D005199 ORTHO05D006277 7.8e-145 517.7 382 74.3
Rhsim08G0198200 Rhododendron simsii HOM05D005199 ORTHO05D006277 5.1e-144 515.0 405 71.9
TAR374G0192 Trochodendron aralioides HOM05D005199 ORTHO05D006277 1.9e-143 513.1 374 75.4
Lj1g0022547 Lotus japonicus HOM05D005199 ORTHO05D006277 9.6e-143 510.8 404 72.5
Nitab4.5_0000976g0090 Nicotiana tabacum HOM05D005199 ORTHO05D006277 1.6e-142 510.0 422 68.5
SHI14097 Sapria himalayana HOM05D005199 ORTHO05D006277 2.8e-142 509.2 443 63.2
Glyma.06G163600 Glycine max HOM05D005199 ORTHO05D006277 3.6e-142 508.8 416 71.2
vmacro19190 Vaccinium macrocarpon HOM05D005199 ORTHO05D006277 3.6e-142 508.8 404 72.0
VMungo1309G0841 Vigna mungo HOM05D005199 ORTHO05D006277 3.6e-142 508.8 417 71.9
TWI14G0958 Tripterygium wilfordii HOM05D005199 ORTHO05D006277 4.8e-142 508.4 392 69.9
Gohir.A07G046500 Gossypium hirsutum HOM05D005199 ORTHO05D006277 1.1e-141 507.3 409 72.4
Nitab4.5_0011600g0020 Nicotiana tabacum HOM05D005199 ORTHO05D006277 3.1e-141 505.8 397 69.8
Cpa.g.sc13.181 Carica papaya HOM05D005199 ORTHO05D006277 9.0e-141 504.2 394 72.3
Duzib084G1266 Durio zibethinus HOM05D005199 ORTHO05D006277 1.2e-140 503.8 394 70.8
MD14G1146700 Malus domestica HOM05D005199 ORTHO05D006277 2.6e-140 502.7 416 70.0
Actinidia25514 Actinidia chinensis HOM05D005199 ORTHO05D006277 2.9e-139 499.2 393 70.7
HanXRQChr09g0273821 Helianthus annuus HOM05D005199 ORTHO05D006277 8.4e-139 497.7 410 68.8
Phvul.009G160900 Phaseolus vulgaris HOM05D005199 ORTHO05D006277 5.4e-138 495.0 409 71.9
arahy.Tifrunner.gnm1.ann1.4TKD14 Arachis hypogaea HOM05D005199 ORTHO05D006277 4.6e-137 491.9 430 66.3
Gohir.D07G050800 Gossypium hirsutum HOM05D005199 ORTHO05D006277 5.1e-136 488.4 407 71.5
CDE02G3820 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 2.1e-134 483.0 383 67.4
MELO3C026157.2 Cucumis melo HOM05D005199 ORTHO05D006277 2.1e-134 483.0 398 68.3
arahy.Tifrunner.gnm1.ann1.P6GRAY Arachis hypogaea HOM05D005199 ORTHO05D006277 2.8e-134 482.6 425 66.1
CDE06G1181 Ceratophyllum demersum HOM05D005199 ORTHO05D006277 8.1e-134 481.1 383 66.6
CsaV3_1G000050 Cucumis sativus L. HOM05D005199 ORTHO05D006277 1.8e-133 479.9 399 68.2
Lj9A487G53 Lonicera japonica HOM05D005199 ORTHO05D006277 5.3e-133 478.4 362 71.5
Gorai.001G053900 Gossypium raimondii HOM05D005199 ORTHO05D006277 6.9e-133 478.0 405 70.6
Lsat_1_v5_gn_4_84380 Lactuca sativa HOM05D005199 ORTHO05D006277 3.4e-132 475.7 429 66.0
DCAR_016338 Daucus carota HOM05D005199 ORTHO05D006277 5.8e-132 474.9 389 67.9
ClCG06G018380 Citrullus lanatus HOM05D005199 ORTHO05D006277 7.6e-132 474.6 371 72.2
FAN13G0330 Fragaria x ananassa HOM05D005199 ORTHO05D006277 7.6e-132 474.6 414 63.5
Sp2g25050 Schrenkiella parvula HOM05D005199 ORTHO05D006277 1.3e-131 473.8 410 65.9
RcHm_v2.0_Chr7g0188591 Rosa chinensis HOM05D005199 ORTHO05D006277 1.7e-131 473.4 418 63.4
DCAR_025645 Daucus carota HOM05D005199 ORTHO05D006277 2.2e-131 473.0 396 67.4
BcaC01g02441 Brassica carinata HOM05D005199 ORTHO05D006277 4.9e-131 471.9 407 63.9
C03p65260 Brassica napus HOM05D005199 ORTHO05D006277 8.4e-131 471.1 410 63.4
BolC3t18779H Brassica oleracea HOM05D005199 ORTHO05D006277 8.4e-131 471.1 410 63.4
FAN08G3145 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.3e-130 467.6 410 62.9
AT5G61850 Arabidopsis thaliana HOM05D005199 ORTHO05D006277 1.2e-129 467.2 414 65.9
Aa31LG11G1640 Aethionema arabicum HOM05D005199 ORTHO05D006277 1.6e-129 466.8 402 65.4
A06p28520 Brassica napus HOM05D005199 ORTHO05D006277 2.7e-129 466.1 410 62.7
BraA06t25798Z Brassica rapa HOM05D005199 ORTHO05D006277 2.7e-129 466.1 410 62.7
THA.LOC104801769 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 4.6e-129 465.3 384 68.2
FAN04G2629 Fragaria x ananassa HOM05D005199 ORTHO05D006277 6.0e-129 464.9 419 61.8
PGR102G3000 Punica granatum HOM05D005199 ORTHO05D006277 1.0e-128 464.2 388 67.0
FAN18G4150 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.8e-128 463.4 417 62.1
Thhalv10005606m.g Eutrema salsugineum HOM05D005199 ORTHO05D006277 2.3e-128 463.0 402 65.9
THA.LOC104818285 Tarenaya hassleriana HOM05D005199 ORTHO05D006277 8.7e-128 461.1 406 65.5
COL.COLO4_37264 Corchorus olitorius HOM05D005199 ORTHO05D006277 1.1e-127 460.7 370 70.5
Carub.0008s2255 Capsella rubella HOM05D005199 ORTHO05D006277 1.6e-126 456.8 412 64.8
BcaB02g09607 Brassica carinata HOM05D005199 ORTHO05D006277 4.0e-125 452.2 399 63.7
BcaB07g29818 Brassica carinata HOM05D005199 ORTHO05D006277 6.9e-125 451.4 408 62.3
A02p41740 Brassica napus HOM05D005199 ORTHO05D006277 2.6e-124 449.5 406 64.8
BraA02t09114Z Brassica rapa HOM05D005199 ORTHO05D006277 4.5e-124 448.7 409 64.3
AL8G38620 Arabidopsis lyrata HOM05D005199 ORTHO05D006277 3.8e-123 445.7 410 63.7
CARHR275620 Cardamine hirsuta HOM05D005199 ORTHO05D006277 4.9e-123 445.3 403 64.8
BcaC03g18101 Brassica carinata HOM05D005199 ORTHO05D006277 1.9e-122 443.4 406 64.3
C02p61660 Brassica napus HOM05D005199 ORTHO05D006277 1.9e-122 443.4 406 64.3
BolC2t12224H Brassica oleracea HOM05D005199 ORTHO05D006277 3.2e-122 442.6 409 63.8
unitig_0.g1099 Utricularia gibba HOM05D005199 ORTHO05D006277 4.6e-121 438.7 316 75.9
Eucgr.K02192 Eucalyptus grandis HOM05D005199 ORTHO05D006277 7.9e-121 438.0 324 73.1
MBI10_g44970_MAGBIO Magnolia biondii HOM05D005199 ORTHO05D006277 3.9e-120 435.6 339 72.6
AUR62032216 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.9e-119 433.3 355 65.1
EL10Ac5g11279 Beta vulgaris HOM05D005199 ORTHO05D006277 2.8e-118 429.5 501 54.5
Sc22g0003300 Simmondsia chinensis HOM05D005199 ORTHO05D006277 1.1e-117 427.6 457 58.2
TPR.G25958 Trifolium pratense HOM05D005199 ORTHO05D006277 4.1e-117 425.6 341 71.3
Sed0007314 Sechium edule HOM05D005199 ORTHO05D006277 2.0e-116 423.3 347 67.4
unitig_61.g26224 Utricularia gibba HOM05D005199 ORTHO05D006277 3.4e-116 422.5 297 75.8
arahy.Tifrunner.gnm1.ann1.33WSUR Arachis hypogaea HOM05D005199 ORTHO05D006277 1.0e-115 421.0 379 62.3
Aqoxy5G03105 Aquilegia oxysepala HOM05D005199 ORTHO05D006277 2.9e-115 419.5 409 59.9
arahy.Tifrunner.gnm1.ann1.31D2RV Arachis hypogaea HOM05D005199 ORTHO05D006277 1.9e-114 416.8 375 61.6
Ah.02g114560 Amaranthus hybridus HOM05D005199 ORTHO05D006277 3.2e-114 416.0 378 64.0
PSO478G1920 Papaver somniferum HOM05D005199 ORTHO05D006277 1.2e-113 414.1 428 58.4
SGA_v2.0_scaffold168G38552 Striga asiatica HOM05D005199 ORTHO05D006277 1.5e-111 407.1 343 63.8
FvH4_3g04170 Fragaria vesca HOM05D005199 ORTHO05D006277 3.3e-111 406.0 416 57.0
FAN11G0489 Fragaria x ananassa HOM05D005199 ORTHO05D006277 5.7e-111 405.2 404 57.9
FvH4_3g03530 Fragaria vesca HOM05D005199 ORTHO05D006277 9.7e-111 404.4 404 57.9
FAN11G0779 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.6e-110 403.7 414 56.8
ATR0582G251 Amborella trichopoda HOM05D005199 ORTHO05D006277 4.1e-109 399.1 390 59.0
FAN21G1800 Fragaria x ananassa HOM05D005199 ORTHO05D006277 9.1e-109 397.9 408 54.9
FAN25G0693 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.5e-108 397.1 430 54.4
Zm00001eb430240 Zea mays HOM05D005199 ORTHO05D006277 1.4e-104 384.0 401 55.6
Zm00001eb071990 Zea mays HOM05D005199 ORTHO05D006277 3.6e-97 359.4 385 56.4
AUR62044212 Chenopodium quinoa HOM05D005199 ORTHO05D006277 2.3e-96 356.7 433 50.8
Os04g0598300 Oryza sativa ssp. japonica HOM05D005199 ORTHO05D006277 3.7e-94 349.4 398 54.5
AUR62043310 Chenopodium quinoa HOM05D005199 ORTHO05D006277 1.6e-92 344.0 353 56.4
SEGI_03714 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 7.2e-90 335.1 384 51.0
Mapoly0113s0034 Marchantia polymorpha HOM05D005199 ORTHO05D006277 2.1e-89 333.6 338 53.0
Lalb_Chr11g0069151 Lupinus albus HOM05D005199 ORTHO05D006277 1.8e-88 330.5 169 91.1
SEGI_00497 Sequoiadendron giganteum HOM05D005199 ORTHO05D006277 2.0e-87 327.0 329 52.9
HPP92_021614 Vanilla planifolia HOM05D005199 ORTHO05D006277 4.1e-85 319.3 372 50.8
Migut.D01179 Erythranthe guttata HOM05D005199 ORTHO05D006277 2.0e-84 317.0 180 83.9
Pp3c3_11670 Physcomitrium patens HOM05D005199 ORTHO05D006277 3.5e-84 316.2 350 49.1
Pp3c13_8760 Physcomitrium patens HOM05D005199 ORTHO05D006277 1.5e-79 300.8 312 51.3
Lalb_Chr12g0202561 Lupinus albus HOM05D005199 ORTHO05D006277 5.5e-74 282.3 283 62.5
Lalb_Chr07g0183841 Lupinus albus HOM05D005199 ORTHO05D006277 7.2e-74 282.0 282 61.0
Sabra15G0071900 Salix brachista HOM05D005199 ORTHO05D006277 1.6e-68 264.2 272 59.9
FvH4_5g09660 Fragaria vesca HOM05D005199 ORTHO05D006277 3.8e-67 259.6 293 54.9
Glyma.04G202002 Glycine max HOM05D005199 ORTHO05D006277 2.5e-66 256.9 140 88.6
PGSC0003DMG400014174 Solanum tuberosum HOM05D005199 ORTHO05D006277 1.2e-60 238.0 123 92.7
Lalb_Chr07g0183831 Lupinus albus HOM05D005199 ORTHO05D006277 3.2e-53 213.4 114 86.0
Actinidia18295 Actinidia chinensis HOM05D005199 ORTHO05D006277 1.6e-49 201.1 160 69.4
SMO347G0183 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 9.9e-47 191.8 113 74.3
FAN25G1078 Fragaria x ananassa HOM05D005199 ORTHO05D006277 1.1e-45 188.3 170 56.5
CBR_g60061 Chara braunii HOM05D005199 ORTHO05D006277 7.8e-44 182.2 324 37.0
Lalb_Chr12g0202551 Lupinus albus HOM05D005199 ORTHO05D006277 1.9e-42 177.6 92 88.0
Lalb_Chr11g0069141 Lupinus albus HOM05D005199 ORTHO05D006277 2.1e-36 157.5 151 58.9
AagrBONN_evm.TU.Sc2ySwM_228.2166 Anthoceros agrestis HOM05D005199 ORTHO05D006277 3.6e-33 146.7 257 37.0
CANSAT11G1658 Cannabis sativa HOM05D005199 ORTHO05D006277 1.8e-24 117.9 102 61.8
CDE05G0289 Ceratophyllum demersum HOM05D000263 ORTHO05D000213 5.1e-19 99.8 107 57.0
SMO347G0146 Selaginella moellendorffii HOM05D005199 ORTHO05D006277 1.3e-14 85.1 71 53.5
unitig_61.g26223 Utricularia gibba HOM05D005199 ORTHO05D006277 6.9e-08 62.8 61 52.5
unitig_0.g1098 Utricularia gibba HOM05D005199 ORTHO05D006277 1.7e-06 58.2 49 55.1


User provided reference genes

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