Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 1.9e-138 495.7 236 100.0
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 2.6e-127 458.8 228 95.2
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 2.0e-87 326.2 208 71.2
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 4.5e-87 325.1 237 67.1
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.0e-86 323.9 209 69.9
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 8.7e-83 310.8 211 65.4
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 1.1e-82 310.5 205 67.8
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 1.1e-82 310.5 208 68.3
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 4.3e-82 308.5 222 64.4
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 4.3e-82 308.5 230 64.3
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 3.7e-81 305.4 212 64.6
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 1.1e-80 303.9 211 65.4
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 1.4e-80 303.5 236 58.5
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.8e-80 303.1 206 67.0
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 5.3e-80 301.6 228 61.8
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 1.5e-79 300.1 229 63.8
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 2.0e-79 299.7 207 66.2
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 2.6e-79 299.3 229 63.8
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 3.4e-79 298.9 231 60.6
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 4.5e-79 298.5 211 63.5
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 1.0e-78 297.4 235 59.6
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 1.7e-78 296.6 227 60.8
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 2.9e-78 295.8 212 63.2
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 5.0e-78 295.0 215 63.7
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.4e-77 293.5 217 61.3
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 1.9e-77 293.1 230 60.0
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 5.5e-77 291.6 227 63.4
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 2.1e-76 289.7 229 61.6
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 2.1e-76 289.7 225 58.7
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 4.6e-76 288.5 200 64.5
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 7.9e-76 287.7 208 63.0
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 7.9e-76 287.7 218 61.0
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 1.0e-75 287.3 237 58.2
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 1.4e-75 287.0 235 59.1
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 6.7e-75 284.6 213 61.5
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 6.7e-75 284.6 231 61.0
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 1.1e-74 283.9 230 57.8
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 3.3e-74 282.3 212 61.3
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 4.3e-74 282.0 212 61.8
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 1.4e-72 276.9 235 56.6
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 2.4e-72 276.2 225 56.4
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 5.3e-72 275.0 230 57.0
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 5.3e-72 275.0 213 62.9
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 5.3e-72 275.0 232 56.9
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 1.2e-71 273.9 212 58.0
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 1.5e-71 273.5 205 59.0
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.5e-71 273.5 241 56.0
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 1.5e-71 273.5 211 63.0
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 2.0e-71 273.1 235 55.7
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 2.6e-71 272.7 235 54.9
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 1.3e-70 270.4 220 57.3
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 1.3e-70 270.4 213 59.2
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 1.3e-70 270.4 186 67.2
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 2.9e-70 269.2 205 59.0
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 3.8e-70 268.9 233 54.9
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 8.5e-70 267.7 214 59.3
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 3.2e-69 265.8 230 53.5
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 4.2e-69 265.4 173 69.4
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 9.4e-69 264.2 194 62.9
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 1.6e-68 263.5 213 56.3
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 1.6e-68 263.5 213 56.3
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 2.1e-68 263.1 213 56.3
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 4.7e-68 261.9 230 54.3
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 2.3e-67 259.6 174 70.1
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 3.9e-67 258.8 211 57.8
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 6.7e-67 258.1 237 53.6
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 1.5e-66 256.9 199 56.8
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 1.5e-66 256.9 189 65.6
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 2.0e-66 256.5 213 54.5
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 5.7e-66 255.0 194 56.2
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 7.4e-66 254.6 211 51.7
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 9.7e-66 254.2 253 52.2
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 1.7e-65 253.4 227 50.2
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 2.2e-65 253.1 229 48.0
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 2.8e-65 252.7 208 53.4
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 8.2e-65 251.1 229 50.7
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 1.1e-64 250.8 204 53.9
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 1.1e-64 250.8 231 51.5
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 1.4e-64 250.4 215 54.4
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.4e-64 250.4 207 54.1
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 2.4e-64 249.6 235 50.2
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 1.5e-63 246.9 229 49.3
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 2.6e-63 246.1 204 57.8
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 4.5e-63 245.4 227 50.2
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 7.7e-63 244.6 227 52.0
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 1.7e-62 243.4 222 49.5
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 1.7e-62 243.4 222 49.5
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 2.2e-62 243.0 209 52.2
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 2.2e-62 243.0 196 54.1
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 3.8e-62 242.3 213 53.5
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 5.0e-62 241.9 230 50.0
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 8.5e-62 241.1 204 53.4
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 4.2e-61 238.8 204 52.5
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 5.5e-61 238.4 212 58.0
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 1.6e-60 236.9 231 49.8
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 1.6e-60 236.9 231 49.8
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 2.1e-60 236.5 212 52.4
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 4.7e-60 235.3 228 47.8
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 4.7e-60 235.3 228 47.8
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 8.0e-60 234.6 228 47.4
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 1.0e-59 234.2 205 52.7
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 1.4e-59 233.8 209 50.2
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 6.7e-59 231.5 250 50.8
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 1.1e-58 230.7 189 53.4
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 1.5e-58 230.3 167 60.5
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 2.0e-58 229.9 232 49.1
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 2.6e-58 229.6 204 50.0
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 1.3e-57 227.3 200 55.0
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 3.7e-57 225.7 167 64.1
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 3.1e-56 222.6 253 44.7
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 4.1e-56 222.2 173 57.2
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 4.1e-56 222.2 213 50.2
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 5.3e-56 221.9 213 50.7
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 1.2e-55 220.7 199 56.8
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 4.5e-55 218.8 233 47.2
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 8.0e-52 208.0 222 46.4
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 4.0e-51 205.7 185 52.4
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.6e-50 203.0 240 44.2
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 1.7e-49 200.3 232 45.3
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 3.1e-48 196.1 271 43.9
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 3.5e-47 192.6 231 44.2
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 5.0e-46 188.7 229 43.7
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 5.5e-45 185.3 221 42.1
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 9.4e-45 184.5 201 42.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 3.6e-44 182.6 202 44.1
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 6.1e-44 181.8 133 59.4
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 5.7e-42 175.3 192 51.0
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 2.7e-39 166.4 130 53.1
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 3.5e-39 166.0 109 67.0
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 3.8e-38 162.5 153 55.6
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 1.5e-26 124.0 153 40.5
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 1.3e-25 120.9 90 52.2
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 3.0e-22 109.8 106 50.0
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 4.3e-21 105.9 70 60.0
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 1.4e-19 100.9 58 74.1
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 2.3e-19 100.1 83 51.8
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.2e-18 97.8 78 56.4
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 4.4e-18 95.9 52 76.9
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 8.3e-17 91.7 102 46.1
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 2.3e-14 83.6 53 58.5
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 3.9e-14 82.8 99 45.5
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 6.6e-14 82.0 105 42.9
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 9.5e-13 78.2 118 42.4
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 4.7e-12 75.9 96 45.8
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 6.2e-12 75.5 64 45.3
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 2.3e-11 73.6 206 25.7
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 3.4e-10 69.7 134 32.8
CAN.G1235.23 Capsicum annuum HOM05D004918 ORTHO05D005706 4.9e-09 65.9 31 77.4
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 7.1e-08 62.0 52 55.8
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.2e-07 61.2 49 59.2
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 2.1e-07 60.5 84 39.3
AagrBONN_evm.TU.Sc2ySwM_344.4109 Anthoceros agrestis HOM05D004918 ORTHO05D005706 2.7e-07 60.1 134 33.6
Actinidia18259 Actinidia chinensis HOM05D004918 ORTHO05D005706 3.0e-06 56.6 52 51.9
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 3.0e-06 56.6 51 52.9
MBI02_g02973_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.0e-06 56.6 26 80.8


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