Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g05280 Coffea canephora HOM05D004918 ORTHO05D005706 6.8e-133 477.2 228 100.0
Cc04_g05650 Coffea canephora HOM05D004918 ORTHO05D005706 2.5e-127 458.8 228 95.2
Oeu004556.1 Olea europaea HOM05D004918 ORTHO05D005706 1.3e-86 323.6 208 70.2
CSS0025832 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 1.4e-85 320.1 209 70.3
Dinv23270 Davidia involucrata HOM05D004918 ORTHO05D005706 3.4e-84 315.5 211 72.0
Hma1.2p1_1914F.1_g307380 Hydrangea macrophylla HOM05D004918 ORTHO05D005706 3.2e-82 308.9 208 68.8
Migut.I00673 Erythranthe guttata HOM05D004918 ORTHO05D005706 4.2e-82 308.5 211 64.9
TAR625G0238 Trochodendron aralioides HOM05D004918 ORTHO05D005706 3.5e-81 305.4 230 63.5
Ciclev10026430m.g Citrus clementina HOM05D004918 ORTHO05D005706 1.3e-80 303.5 222 63.5
MSTRG.22808 Avicennia marina HOM05D004918 ORTHO05D005706 5.1e-80 301.6 211 64.9
DCAR_025541 Daucus carota HOM05D004918 ORTHO05D005706 6.7e-80 301.2 200 68.0
Actinidia25464 Actinidia chinensis HOM05D004918 ORTHO05D005706 1.9e-79 299.7 206 67.0
Thecc.06G046100 Theobroma cacao HOM05D004918 ORTHO05D005706 1.9e-79 299.7 212 63.7
Manes.11G069000 Manihot esculenta HOM05D004918 ORTHO05D005706 4.3e-79 298.5 222 60.4
Potri.003G184701 Populus trichocarpa HOM05D004918 ORTHO05D005706 5.7e-79 298.1 228 61.4
Atru.chr1.2801 Acer truncatum HOM05D004918 ORTHO05D005706 9.7e-79 297.4 229 62.9
SGA_v2.0_scaffold419G51286 Striga asiatica HOM05D004918 ORTHO05D005706 3.7e-78 295.4 211 63.5
Nn2g14031 Nelumbo nucifera HOM05D004918 ORTHO05D005706 4.8e-78 295.0 230 60.0
Prupe.3G103300 Prunus persica HOM05D004918 ORTHO05D005706 4.8e-78 295.0 229 62.9
RcHm_v2.0_Chr2g0132361 Rosa chinensis HOM05D004918 ORTHO05D005706 3.1e-77 292.4 227 59.9
SalBow8G2778 Salvia bowleyana HOM05D004918 ORTHO05D005706 3.1e-77 292.4 217 60.8
Sc05g0005820 Simmondsia chinensis HOM05D004918 ORTHO05D005706 4.1e-77 292.0 207 64.7
Sabra03G0135200 Salix brachista HOM05D004918 ORTHO05D005706 5.3e-77 291.6 215 63.3
TWI12G0375 Tripterygium wilfordii HOM05D004918 ORTHO05D005706 6.9e-77 291.2 225 58.7
Nn2g12451 Nelumbo nucifera HOM05D004918 ORTHO05D005706 9.0e-77 290.8 230 59.1
Duzib192G0308 Durio zibethinus HOM05D004918 ORTHO05D005706 1.2e-76 290.4 212 62.3
Sopen03g036560 Solanum pennellii HOM05D004918 ORTHO05D005706 1.5e-76 290.0 212 63.2
Peaxi162Scf00314g01045 Petunia axillaris HOM05D004918 ORTHO05D005706 2.0e-76 289.7 213 63.4
ECA232G4560 Erigeron canadensis HOM05D004918 ORTHO05D005706 4.5e-76 288.5 227 63.4
Nitab4.5_0004738g0120 Nicotiana tabacum HOM05D004918 ORTHO05D005706 1.3e-75 287.0 218 61.0
MD12G1013200 Malus domestica HOM05D004918 ORTHO05D005706 3.8e-75 285.4 229 60.7
Cfa001859 Carpinus fangiana HOM05D004918 ORTHO05D005706 6.5e-75 284.6 221 60.2
Atru.chr8.1159 Acer truncatum HOM05D004918 ORTHO05D005706 1.4e-74 283.5 208 63.0
Gorai.009G122300 Gossypium raimondii HOM05D004918 ORTHO05D005706 2.5e-74 282.7 213 60.1
PGSC0003DMG400014153 Solanum tuberosum HOM05D004918 ORTHO05D005706 2.5e-74 282.7 212 61.8
GSVIVG01016107001 Vitis vinifera HOM05D004918 ORTHO05D005706 5.5e-74 281.6 230 57.8
MD14G1138800 Malus domestica HOM05D004918 ORTHO05D005706 1.2e-73 280.4 231 60.2
Nitab4.5_0002700g0180 Nicotiana tabacum HOM05D004918 ORTHO05D005706 1.6e-73 280.0 212 60.8
Gohir.A05G117500 Gossypium hirsutum HOM05D004918 ORTHO05D005706 6.1e-73 278.1 213 59.6
Lj6g0018730 Lotus japonicus HOM05D004918 ORTHO05D005706 1.0e-72 277.3 212 58.5
Medtr3g110270 Medicago truncatula HOM05D004918 ORTHO05D005706 1.8e-72 276.6 213 61.0
Lalb_Chr13g0301111 Lupinus albus HOM05D004918 ORTHO05D005706 2.3e-72 276.2 212 59.4
HanXRQChr17g0561891 Helianthus annuus HOM05D004918 ORTHO05D005706 3.0e-72 275.8 213 63.4
TPR.G15094 Trifolium pratense HOM05D004918 ORTHO05D005706 3.0e-72 275.8 208 60.1
arahy.Tifrunner.gnm1.ann1.T9YNFF Arachis hypogaea HOM05D004918 ORTHO05D005706 6.7e-72 274.6 205 59.5
Cpa.g.sc14.108 Carica papaya HOM05D004918 ORTHO05D005706 6.7e-72 274.6 225 56.9
HanXRQChr10g0298641 Helianthus annuus HOM05D004918 ORTHO05D005706 6.7e-72 274.6 211 64.5
Eucgr.F03982 Eucalyptus grandis HOM05D004918 ORTHO05D005706 1.5e-71 273.5 228 57.9
CANSAT35G0550 Cannabis sativa HOM05D004918 ORTHO05D005706 2.0e-71 273.1 205 59.5
ClCG10G012810 Citrullus lanatus HOM05D004918 ORTHO05D005706 2.0e-71 273.1 229 57.6
PGR102G0155 Punica granatum HOM05D004918 ORTHO05D005706 2.0e-71 273.1 232 57.3
VMungo1309G0542 Vigna mungo HOM05D004918 ORTHO05D005706 3.3e-71 272.3 208 60.1
FAN09G4697 Fragaria x ananassa HOM05D004918 ORTHO05D005706 5.7e-71 271.6 241 55.6
Glyma.09G000800 Glycine max HOM05D004918 ORTHO05D005706 9.7e-71 270.8 212 57.5
QL10p031453 Quercus lobata HOM05D004918 ORTHO05D005706 3.7e-70 268.9 186 66.7
CiPaw.01G073400 Carya illinoinensis HOM05D004918 ORTHO05D005706 4.8e-70 268.5 214 59.8
CiPaw.02G163500 Carya illinoinensis HOM05D004918 ORTHO05D005706 2.4e-69 266.2 220 56.4
Solyc03g117650.4 Solanum lycopersicum HOM05D004918 ORTHO05D005706 1.5e-68 263.5 211 58.8
Psat5g020280 Pisum sativum HOM05D004918 ORTHO05D005706 4.5e-68 261.9 213 58.2
Rhsim08G0203200 Rhododendron simsii HOM05D004918 ORTHO05D005706 5.9e-68 261.5 173 69.4
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.0e-67 260.8 189 63.0
Lsat_1_v5_gn_4_85101 Lactuca sativa HOM05D004918 ORTHO05D005706 5.0e-67 258.5 189 66.7
PSO724G0600 Papaver somniferum HOM05D004918 ORTHO05D005706 6.5e-67 258.1 208 55.3
PSO729G0217 Papaver somniferum HOM05D004918 ORTHO05D005706 6.5e-67 258.1 208 55.3
CARHR016550 Cardamine hirsuta HOM05D004918 ORTHO05D005706 8.5e-67 257.7 196 56.1
CsaV3_3G032650 Cucumis sativus L. HOM05D004918 ORTHO05D005706 8.5e-67 257.7 232 54.7
PSO017G2949 Papaver somniferum HOM05D004918 ORTHO05D005706 8.5e-67 257.7 208 55.3
Phvul.009G194500 Phaseolus vulgaris HOM05D004918 ORTHO05D005706 8.5e-67 257.7 208 54.8
Oeu035883.1 Olea europaea HOM05D004918 ORTHO05D005706 2.5e-66 256.1 174 69.0
AL1G28210 Arabidopsis lyrata HOM05D004918 ORTHO05D005706 4.2e-66 255.4 211 52.6
arahy.Tifrunner.gnm1.ann1.ZUNL57 Arachis hypogaea HOM05D004918 ORTHO05D005706 4.2e-66 255.4 208 55.3
PSO063G6564 Papaver somniferum HOM05D004918 ORTHO05D005706 4.2e-66 255.4 208 54.3
FAN02G2144 Fragaria x ananassa HOM05D004918 ORTHO05D005706 5.5e-66 255.0 250 51.6
Carub.0001s1585 Capsella rubella HOM05D004918 ORTHO05D005706 9.4e-66 254.2 211 50.7
Aa31LG7G620 Aethionema arabicum HOM05D004918 ORTHO05D005706 1.6e-65 253.4 204 54.4
AT1G16040 Arabidopsis thaliana HOM05D004918 ORTHO05D005706 1.6e-65 253.4 194 56.2
Ah.01g002790 Amaranthus hybridus HOM05D004918 ORTHO05D005706 6.1e-65 251.5 193 57.0
BcaB03g14507 Brassica carinata HOM05D004918 ORTHO05D005706 1.0e-64 250.8 221 52.0
MBI19_g12142_MAGBIO Magnolia biondii HOM05D004918 ORTHO05D005706 1.4e-64 250.4 215 53.5
A09p61040 Brassica napus HOM05D004918 ORTHO05D005706 1.8e-64 250.0 209 52.6
Sed0025979 Sechium edule HOM05D004918 ORTHO05D005706 2.0e-63 246.5 235 50.2
THA.LOC104808174 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 2.0e-63 246.5 198 55.6
C08p44630 Brassica napus HOM05D000031 ORTHO05D007294 2.6e-63 246.1 225 50.2
A08p31410 Brassica napus HOM05D004918 ORTHO05D005706 4.4e-63 245.4 222 50.5
BraA08t35064Z Brassica rapa HOM05D004918 ORTHO05D005706 4.4e-63 245.4 222 50.5
BraA09t41477Z Brassica rapa HOM05D004918 ORTHO05D005706 1.3e-62 243.8 209 52.2
A06p12070 Brassica napus HOM05D004918 ORTHO05D005706 2.8e-62 242.7 196 55.6
Sp1g14360 Schrenkiella parvula HOM05D004918 ORTHO05D005706 2.8e-62 242.7 204 53.9
CDE02G0643 Ceratophyllum demersum HOM05D004918 ORTHO05D005706 3.7e-62 242.3 196 54.1
Thhalv10008658m.g Eutrema salsugineum HOM05D004918 ORTHO05D005706 3.7e-62 242.3 191 56.5
vmacro19072 Vaccinium macrocarpon HOM05D004918 ORTHO05D005706 1.8e-61 240.0 204 56.9
BcaC05g25623 Brassica carinata HOM05D004918 ORTHO05D005706 3.1e-61 239.2 196 56.1
C05p14240 Brassica napus HOM05D004918 ORTHO05D005706 3.1e-61 239.2 196 56.1
PGSC0003DMG402014462 Solanum tuberosum HOM05D004918 ORTHO05D005706 3.1e-61 239.2 213 53.5
HanXRQChr16g0499441 Helianthus annuus HOM05D004918 ORTHO05D005706 4.1e-61 238.8 212 58.5
BraA06t24376Z Brassica rapa HOM05D004918 ORTHO05D005706 7.0e-61 238.0 197 55.8
THA.LOC104812419 Tarenaya hassleriana HOM05D004918 ORTHO05D005706 1.5e-60 236.9 208 53.4
C08p17380 Brassica napus HOM05D004918 ORTHO05D005706 2.0e-60 236.5 204 52.0
BolC8t49364H Brassica oleracea HOM05D004918 ORTHO05D005706 2.0e-60 236.5 204 52.0
BcaC07g38802 Brassica carinata HOM05D004918 ORTHO05D005706 3.5e-60 235.7 204 51.5
BcaB02g06654 Brassica carinata HOM05D004918 ORTHO05D005706 2.9e-59 232.6 204 50.5
BolC5t30156H Brassica oleracea HOM05D004918 ORTHO05D005706 3.8e-59 232.3 197 55.3
Glyma.09G000900 Glycine max HOM05D004918 ORTHO05D005706 3.8e-59 232.3 167 61.1
MELO3C028676.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.1e-58 230.7 211 52.1
COL.COLO4_24896 Corchorus olitorius HOM05D004918 ORTHO05D005706 1.5e-58 230.3 209 50.7
FAN09G3573 Fragaria x ananassa HOM05D004918 ORTHO05D005706 1.9e-58 229.9 250 50.4
SEGI_14369 Sequoiadendron giganteum HOM05D004918 ORTHO05D005706 1.9e-58 229.9 189 54.5
HPP92_001544 Vanilla planifolia HOM05D004918 ORTHO05D005706 1.9e-58 229.9 200 55.5
CAN.G276.2 Capsicum annuum HOM05D004918 ORTHO05D005706 3.6e-57 225.7 167 64.7
ATR0568G024 Amborella trichopoda HOM05D004918 ORTHO05D005706 1.4e-56 223.8 173 57.8
BolC8t52009H Brassica oleracea HOM05D000031 ORTHO05D007294 1.8e-56 223.4 229 47.2
Sopen12g021620 Solanum pennellii HOM05D004918 ORTHO05D005706 4.4e-55 218.8 213 50.2
Solyc12g042530.2 Solanum lycopersicum HOM05D004918 ORTHO05D005706 5.7e-55 218.4 213 50.7
BcaB03g13048 Brassica carinata HOM05D004918 ORTHO05D005706 9.7e-55 217.6 233 47.2
Haze_16687 Corylus avellana HOM05D004918 ORTHO05D005706 6.3e-54 214.9 185 56.8
Zm00001eb403520 Zea mays HOM05D004918 ORTHO05D005706 1.6e-52 210.3 222 46.4
SHI05687 Sapria himalayana HOM05D004918 ORTHO05D005706 5.0e-51 205.3 185 51.9
Os03g0129000 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 2.5e-50 203.0 204 49.0
unitig_62.g23577 Utricularia gibba HOM05D004918 ORTHO05D005706 3.6e-49 199.1 232 45.7
arahy.Tifrunner.gnm1.ann1.BN6NH6 Arachis hypogaea HOM05D004918 ORTHO05D005706 4.0e-48 195.7 208 47.6
arahy.Tifrunner.gnm1.ann1.U5XJV3 Arachis hypogaea HOM05D004918 ORTHO05D005706 4.4e-47 192.2 206 47.1
FAN14G3036 Fragaria x ananassa HOM05D004918 ORTHO05D005706 7.5e-47 191.4 268 42.9
Pp3c8_15970 Physcomitrium patens HOM05D004918 ORTHO05D005706 1.1e-45 187.6 207 44.4
Mapoly0005s0096 Marchantia polymorpha HOM05D004918 ORTHO05D005706 5.9e-44 181.8 188 43.6
Aqoxy4G02614 Aquilegia oxysepala HOM05D004918 ORTHO05D005706 1.0e-43 181.0 124 62.1
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 1.5e-42 177.2 199 44.7
CAN.G1008.5 Capsicum annuum HOM05D000348 ORTHO05D005706 5.5e-42 175.3 108 76.9
Ca_15577_v3 Cicer arietinum L. HOM05D004918 ORTHO05D005706 1.2e-39 167.5 109 68.8
CBR_g41678 Chara braunii HOM05D004918 ORTHO05D005706 2.2e-38 163.3 130 51.5
FvH4_6g28300 Fragaria vesca HOM05D004918 ORTHO05D005706 2.8e-38 162.9 150 55.3
SMO351G0301 Selaginella moellendorffii HOM05D004918 ORTHO05D005706 7.0e-29 131.7 159 42.1
AagrBONN_evm.TU.Sc2ySwM_344.4108 Anthoceros agrestis HOM05D004918 ORTHO05D005706 1.0e-24 117.9 79 55.7
Os10g0200800 Oryza sativa ssp. japonica HOM05D004918 ORTHO05D005706 3.2e-21 106.3 70 58.6
Gohir.D05G118400 Gossypium hirsutum HOM05D004918 ORTHO05D005706 9.2e-21 104.8 106 48.1
CAN.G1986.5 Capsicum annuum HOM05D004918 ORTHO05D005706 1.7e-19 100.5 83 53.0
CAN.G548.17 Capsicum annuum HOM05D002478 ORTHO05D005706 5.0e-19 99.0 58 72.4
CAN.G53.21 Capsicum annuum HOM05D002478 ORTHO05D020307 1.6e-17 94.0 92 50.0
CSS0035645 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 4.7e-17 92.4 78 53.8
CAN.G829.5 Capsicum annuum HOM05D004534 ORTHO05D005706 8.1e-17 91.7 87 50.6
BcaC05g25622 Brassica carinata HOM05D004918 ORTHO05D005706 6.8e-16 88.6 53 62.3
BcaC03g14995 Brassica carinata HOM05D004918 ORTHO05D005706 1.4e-13 80.9 64 48.4
MELO3C000966.2 Cucumis melo HOM05D004918 ORTHO05D005706 1.2e-12 77.8 98 43.9
Zm00001eb002240 Zea mays HOM05D004918 ORTHO05D005706 2.1e-12 77.0 117 41.9
CSS0004145 Camellia sinensis var. sinensis HOM05D004918 ORTHO05D005706 3.5e-12 76.3 78 50.0
Sed0005872 Sechium edule HOM05D004918 ORTHO05D005706 3.5e-12 76.3 96 45.8
Cfa026120 Carpinus fangiana HOM05D004918 ORTHO05D125238 9.5e-10 68.2 121 33.1
MCO15G581 Micromonas commoda HOM05D004918 ORTHO05D005706 1.6e-09 67.4 208 25.5
CAN.G1235.23 Capsicum annuum HOM05D004918 ORTHO05D005706 4.7e-09 65.9 31 77.4
Actinidia08937 Actinidia chinensis HOM05D004918 ORTHO05D005706 6.8e-08 62.0 49 61.2
AUR62034078 Chenopodium quinoa HOM05D004918 ORTHO05D005706 6.8e-08 62.0 52 57.7
AUR62012861 Chenopodium quinoa HOM05D004918 ORTHO05D005706 9.9e-07 58.2 92 38.0
AagrBONN_evm.TU.Sc2ySwM_344.4109 Anthoceros agrestis HOM05D004918 ORTHO05D005706 2.9e-06 56.6 84 38.1
MBI02_g02973_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 2.9e-06 56.6 26 80.8
MELO3C032630.2 Cucumis melo HOM05D004918 ORTHO05D005706 4.9e-06 55.8 83 37.3
Actinidia18259 Actinidia chinensis HOM05D004918 ORTHO05D005706 6.4e-06 55.5 52 50.0


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