Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g04780 Coffea canephora HOM05D007335 ORTHO05D009113 4.4e-78 295.0 208 100.0
Atru.chr1.3077 Acer truncatum HOM05D007335 ORTHO05D009113 9.2e-52 207.6 234 70.1
Atru.chr1.3042 Acer truncatum HOM05D007335 ORTHO05D009113 1.6e-51 206.8 234 70.5
Lsat_1_v5_gn_7_9201 Lactuca sativa HOM05D007335 ORTHO05D009113 2.3e-50 203.0 234 72.2
Lsat_1_v5_gn_7_8840 Lactuca sativa HOM05D007335 ORTHO05D009113 6.6e-50 201.4 221 74.2
HanXRQChr04g0123161 Helianthus annuus HOM05D007335 ORTHO05D009113 2.5e-49 199.5 222 67.6
GSVIVG01027384001 Vitis vinifera HOM05D007335 ORTHO05D009113 2.2e-45 186.4 198 76.8
Lj9P208T20 Lonicera japonica HOM05D007335 ORTHO05D009113 6.4e-45 184.9 232 66.8
arahy.Tifrunner.gnm1.ann1.VC89AA Arachis hypogaea HOM05D007335 ORTHO05D009113 4.6e-43 178.7 227 66.5
Lsat_1_v5_gn_7_8860 Lactuca sativa HOM05D007335 ORTHO05D009113 5.1e-42 175.3 200 60.5
THA.LOC104808192 Tarenaya hassleriana HOM05D007335 ORTHO05D009113 5.6e-41 171.8 221 67.4
AL2G40920 Arabidopsis lyrata HOM05D007335 ORTHO05D009113 9.5e-41 171.0 224 64.3
CARHR074070 Cardamine hirsuta HOM05D007335 ORTHO05D009113 1.2e-40 170.6 221 66.5
Dinv38157 Davidia involucrata HOM05D007335 ORTHO05D009113 1.2e-40 170.6 234 65.4
BraA07t32015Z Brassica rapa HOM05D007335 ORTHO05D009113 8.1e-40 167.9 221 65.6
BolC6t40409H Brassica oleracea HOM05D007335 ORTHO05D009113 1.4e-39 167.2 221 66.1
Thhalv10018541m.g Eutrema salsugineum HOM05D007335 ORTHO05D009113 1.8e-39 166.8 221 66.5
A07p45120 Brassica napus HOM05D007335 ORTHO05D009113 2.3e-39 166.4 221 65.2
Sp5g35240 Schrenkiella parvula HOM05D007335 ORTHO05D009113 3.1e-39 166.0 221 64.3
FAN17G0442 Fragaria x ananassa HOM05D007335 ORTHO05D009113 5.2e-39 165.2 217 67.7
Lalb_Chr22g0350751 Lupinus albus HOM05D007335 ORTHO05D009113 6.8e-39 164.9 234 41.0
CSS0031081 Camellia sinensis var. sinensis HOM05D007335 ORTHO05D009113 8.9e-39 164.5 234 65.8
CSS0035448 Camellia sinensis var. sinensis HOM05D007335 ORTHO05D009113 8.9e-39 164.5 234 65.8
Thecc.06G035600 Theobroma cacao HOM05D007335 ORTHO05D009113 1.5e-38 163.7 231 64.5
Peaxi162Scf00089g00163 Petunia axillaris HOM05D007335 ORTHO05D009113 2.0e-38 163.3 231 64.9
C06p53950 Brassica napus HOM05D007335 ORTHO05D009113 2.6e-38 162.9 221 65.2
HPP92_015277 Vanilla planifolia HOM05D007335 ORTHO05D009113 9.9e-38 161.0 216 66.2
Ciclev10026924m.g Citrus clementina HOM05D007335 ORTHO05D009113 2.9e-37 159.5 229 63.8
AUR62033264 Chenopodium quinoa HOM05D007335 ORTHO05D009113 6.4e-37 158.3 223 65.0
Gohir.D10G078400 Gossypium hirsutum HOM05D007335 ORTHO05D009113 1.4e-36 157.1 230 63.9
Gorai.011G085200 Gossypium raimondii HOM05D007335 ORTHO05D009113 1.4e-36 157.1 230 63.9
TAR636G3162 Trochodendron aralioides HOM05D007335 ORTHO05D009113 1.4e-36 157.1 224 65.2
COL.COLO4_11833 Corchorus olitorius HOM05D007335 ORTHO05D009113 1.9e-36 156.8 229 64.2
QL11p027335 Quercus lobata HOM05D007335 ORTHO05D009113 3.2e-36 156.0 225 43.6
Sabra05G0118300 Salix brachista HOM05D007335 ORTHO05D009113 3.2e-36 156.0 225 64.9
DCAR_014323 Daucus carota HOM05D007335 ORTHO05D009113 4.1e-36 155.6 225 50.2
Rhsim08G0209400 Rhododendron simsii HOM05D007335 ORTHO05D009113 4.1e-36 155.6 234 62.8
Nitab4.5_0011992g0010 Nicotiana tabacum HOM05D007335 ORTHO05D009113 7.1e-36 154.8 227 64.3
PGSC0003DMG400018173 Solanum tuberosum HOM05D007335 ORTHO05D009113 9.2e-36 154.5 225 64.9
Oeu056082.1 Olea europaea HOM05D007335 ORTHO05D009113 1.2e-35 154.1 225 64.4
MELO3C023450.2 Cucumis melo HOM05D007335 ORTHO05D009113 2.1e-35 153.3 229 63.3
CANSAT11G1934 Cannabis sativa HOM05D007335 ORTHO05D009113 2.7e-35 152.9 232 62.1
Gohir.A10G072600 Gossypium hirsutum HOM05D007335 ORTHO05D009113 3.5e-35 152.5 225 64.4
Aqoxy7G03553 Aquilegia oxysepala HOM05D007335 ORTHO05D009113 4.6e-35 152.1 232 61.6
Solyc03g112560.4 Solanum lycopersicum HOM05D007335 ORTHO05D009113 6.0e-35 151.8 231 63.2
Sopen03g031620 Solanum pennellii HOM05D007335 ORTHO05D009113 6.0e-35 151.8 231 63.2
QL05p033457 Quercus lobata HOM05D007335 ORTHO05D009113 7.8e-35 151.4 232 63.4
CsaV3_7G032070 Cucumis sativus L. HOM05D007335 ORTHO05D009113 1.0e-34 151.0 229 62.9
MSTRG.22785 Avicennia marina HOM05D007335 ORTHO05D009113 1.3e-34 150.6 234 62.0
Hma1.2p1_1624F.1_g294260 Hydrangea macrophylla HOM05D007335 ORTHO05D009113 1.7e-34 150.2 236 62.3
Potri.005G147200 Populus trichocarpa HOM05D007335 ORTHO05D009113 1.7e-34 150.2 223 52.5
vmacro19030 Vaccinium macrocarpon HOM05D000991 ORTHO05D000848 1.7e-34 150.2 232 62.5
Migut.I00730 Erythranthe guttata HOM05D007335 ORTHO05D009113 2.3e-34 149.8 224 63.8
Actinidia25436 Actinidia chinensis HOM05D007335 ORTHO05D009113 3.0e-34 149.4 234 62.8
Duzib192G1057 Durio zibethinus HOM05D007335 ORTHO05D009113 3.0e-34 149.4 221 65.6
CAN.G338.3 Capsicum annuum HOM05D007335 ORTHO05D009113 3.9e-34 149.1 227 63.4
ClCG09G003150 Citrullus lanatus HOM05D000991 ORTHO05D009113 3.9e-34 149.1 229 62.9
SalBow7G0717 Salvia bowleyana HOM05D007335 ORTHO05D009113 1.9e-33 146.7 229 61.6
Sed0020676 Sechium edule HOM05D007335 ORTHO05D009113 2.5e-33 146.4 229 62.0
Nn5g27696 Nelumbo nucifera HOM05D007335 ORTHO05D009113 7.3e-33 144.8 231 61.5
SGA_v2.0_scaffold5G02742 Striga asiatica HOM05D007335 ORTHO05D009113 1.2e-32 144.1 229 61.1
Zm00001eb068720 Zea mays HOM05D007335 ORTHO05D009113 2.8e-32 142.9 225 61.8
Phvul.005G182300 Phaseolus vulgaris HOM05D007335 ORTHO05D009113 8.1e-32 141.4 232 59.5
Actinidia24285 Actinidia chinensis HOM05D007335 ORTHO05D009113 2.4e-31 139.8 169 45.0
TWI75G1014 Tripterygium wilfordii HOM05D007335 ORTHO05D009113 2.4e-31 139.8 225 60.4
ECA236G2118 Erigeron canadensis HOM05D007335 ORTHO05D009113 3.1e-31 139.4 221 64.3
Medtr2g104640 Medicago truncatula HOM05D007335 ORTHO05D009113 4.0e-31 139.0 226 61.1
FvH4_4g04420 Fragaria vesca HOM05D007335 ORTHO05D009113 5.2e-31 138.7 234 60.3
FAN12G1318 Fragaria x ananassa HOM05D007335 ORTHO05D009113 5.2e-31 138.7 234 60.3
Prupe.1G046400 Prunus persica HOM05D007335 ORTHO05D009113 5.2e-31 138.7 234 60.7
Os04g0643700 Oryza sativa ssp. japonica HOM05D007335 ORTHO05D009113 2.0e-30 136.7 225 60.0
CiPaw.01G251400 Carya illinoinensis HOM05D007335 ORTHO05D009113 2.6e-30 136.3 226 61.9
Manes.11G062700 Manihot esculenta HOM05D007335 ORTHO05D009113 3.4e-30 136.0 218 47.7
Cpa.g.sc10.128 Carica papaya HOM05D007335 ORTHO05D009113 4.4e-30 135.6 226 61.1
EL10Ac8g18335 Beta vulgaris HOM05D007335 ORTHO05D009113 5.8e-30 135.2 221 62.4
Cfa001918 Carpinus fangiana HOM05D007335 ORTHO05D009113 7.6e-30 134.8 222 61.7
Lj3g0012247 Lotus japonicus HOM05D007335 ORTHO05D009113 7.6e-30 134.8 232 57.8
RcHm_v2.0_Chr4g0394981 Rosa chinensis HOM05D007335 ORTHO05D009113 1.3e-29 134.0 226 61.1
SHI11271 Sapria himalayana HOM05D007335 ORTHO05D009113 1.3e-29 134.0 226 59.3
Eucgr.F03934 Eucalyptus grandis HOM05D007335 ORTHO05D009113 1.7e-29 133.7 224 61.2
Glyma.11G078800 Glycine max HOM05D007335 ORTHO05D009113 1.7e-29 133.7 228 46.1
Glyma.13G367800 Glycine max HOM05D007335 ORTHO05D009113 1.7e-29 133.7 228 46.1
Psat5g304120 Pisum sativum HOM05D007335 ORTHO05D009113 1.7e-29 133.7 226 60.2
VMungo0720G1143 Vigna mungo HOM05D007335 ORTHO05D009113 2.2e-29 133.3 226 58.4
Ah.09g230250 Amaranthus hybridus HOM05D007335 ORTHO05D009113 3.8e-29 132.5 227 59.9
TPR.G12600 Trifolium pratense HOM05D002633 ORTHO05D009113 1.4e-28 130.6 226 60.2
Sc18g0001670 Simmondsia chinensis HOM05D007335 ORTHO05D009113 2.4e-28 129.8 232 58.6
Ca_01038_v3 Cicer arietinum L. HOM05D007335 ORTHO05D009113 4.2e-28 129.0 225 58.7
Ca_01037_v3 Cicer arietinum L. HOM05D007335 ORTHO05D009113 6.0e-27 125.2 226 58.0
Aa31sc12G100 Aethionema arabicum HOM05D007335 ORTHO05D009113 3.3e-25 119.4 230 54.8
Nitab4.5_0019152g0010 Nicotiana tabacum HOM05D007335 ORTHO05D009113 4.3e-25 119.0 69 78.3
Oeu045125.1 Olea europaea HOM05D007335 ORTHO05D009113 5.6e-25 118.6 155 43.9
GSVIVG01027388001 Vitis vinifera HOM05D007335 ORTHO05D009113 2.8e-24 116.3 65 81.5
AT1G80550 Arabidopsis thaliana HOM05D007335 ORTHO05D009113 8.1e-24 114.8 224 56.2
vmacro06415 Vaccinium macrocarpon HOM05D007335 ORTHO05D009113 1.8e-23 113.6 205 37.6
Carub.0002s2701 Capsella rubella HOM05D007335 ORTHO05D009113 3.1e-23 112.8 221 54.3
TAR636G3581 Trochodendron aralioides HOM05D007335 ORTHO05D009113 9.3e-20 101.3 52 86.5
Ca_01034_v3 Cicer arietinum L. HOM05D007335 ORTHO05D009113 1.6e-19 100.5 62 72.6
CsaV3_7G032100 Cucumis sativus L. HOM05D007335 ORTHO05D009113 5.1e-18 95.5 62 69.4
Actinidia18226 Actinidia chinensis HOM05D001077 ORTHO05D009113 1.2e-14 84.3 58 65.5
Actinidia28541 Actinidia chinensis HOM05D007335 ORTHO05D009113 2.5e-09 66.6 50 60.0
ATR0767G117 Amborella trichopoda HOM05D007335 ORTHO05D009113 2.5e-09 66.6 43 69.8
PGR102G0018 Punica granatum HOM05D007335 ORTHO05D009113 2.1e-08 63.5 32 81.2


User provided reference genes

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