Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g04110 Coffea canephora HOM05D003806 ORTHO05D004346 4.0e-41 171.0 88 100.0
Cc05_g00050 Coffea canephora HOM05D003806 ORTHO05D004346 6.3e-18 94.0 57 93.0
Cfa023525 Carpinus fangiana HOM05D003806 ORTHO05D004346 2.8e-10 68.6 57 68.4
CiPaw.03G113300 Carya illinoinensis HOM05D003806 ORTHO05D004346 6.3e-10 67.4 57 68.4
Phvul.011G024500 Phaseolus vulgaris HOM05D003806 ORTHO05D004346 6.3e-10 67.4 57 64.9
Glyma.11G096400 Glycine max HOM05D003806 ORTHO05D004346 8.2e-10 67.0 57 63.2
TAR624G1065 Trochodendron aralioides HOM05D003806 ORTHO05D004346 8.2e-10 67.0 57 70.2
Cpa.g.sc8.294 Carica papaya HOM05D003806 ORTHO05D004346 1.4e-09 66.2 57 64.9
Glyma.12G022500 Glycine max HOM05D003806 ORTHO05D004346 1.8e-09 65.9 57 63.2
TAR626G1670 Trochodendron aralioides HOM05D003806 ORTHO05D004346 1.8e-09 65.9 57 64.9
MD17G1128600 Malus domestica HOM05D003806 ORTHO05D004346 4.1e-09 64.7 57 63.2
Medtr4g076030 Medicago truncatula HOM05D003806 ORTHO05D004346 5.3e-09 64.3 58 65.5
Sabra06G0014900 Salix brachista HOM05D003806 ORTHO05D004346 6.9e-09 63.9 57 64.9
Dinv09877 Davidia involucrata HOM05D003806 ORTHO05D004346 9.1e-09 63.5 57 61.4
Sabra06G0015100 Salix brachista HOM05D003806 ORTHO05D004346 9.1e-09 63.5 56 64.3
VMungo1127G1373 Vigna mungo HOM05D003806 ORTHO05D004346 9.1e-09 63.5 57 59.6
Haze_13639 Corylus avellana HOM05D003806 ORTHO05D004346 1.2e-08 63.2 38 84.2
Oeu003096.1 Olea europaea HOM05D003806 ORTHO05D004346 1.5e-08 62.8 57 64.9
Sabra06G0014600 Salix brachista HOM05D003806 ORTHO05D004346 2.6e-08 62.0 57 63.2
Sabra06G0014700 Salix brachista HOM05D003806 ORTHO05D004346 2.6e-08 62.0 57 63.2
Eucgr.A00904 Eucalyptus grandis HOM05D003806 ORTHO05D004346 3.4e-08 61.6 63 60.3
GSVIVG01015817001 Vitis vinifera HOM05D003806 ORTHO05D004346 3.4e-08 61.6 57 63.2
Lalb_Chr01g0001171 Lupinus albus HOM05D003806 ORTHO05D004346 5.9e-08 60.8 57 59.6
CSS0042337 Camellia sinensis var. sinensis HOM05D003806 ORTHO05D004346 7.7e-08 60.5 55 67.3
SalBow7G1206 Salvia bowleyana HOM05D003806 ORTHO05D004346 7.7e-08 60.5 63 61.9
Nitab4.5_0000170g0440 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.0e-07 60.1 57 64.9
Sopen07g022880 Solanum pennellii HOM05D003806 ORTHO05D004346 1.0e-07 60.1 57 64.9
PGSC0003DMG400011753 Solanum tuberosum HOM05D003806 ORTHO05D004346 1.0e-07 60.1 57 64.9
Nitab4.5_0002232g0030 Nicotiana tabacum HOM05D003806 ORTHO05D004346 1.3e-07 59.7 56 64.3
Solyc07g043320.3 Solanum lycopersicum HOM05D003806 ORTHO05D004346 1.7e-07 59.3 57 64.9
QL04p061548 Quercus lobata HOM05D003806 ORTHO05D004346 2.2e-07 58.9 56 58.9
Aqoxy1G01455 Aquilegia oxysepala HOM05D003806 ORTHO05D004346 2.9e-07 58.5 57 59.6
Peaxi162Scf00393g00413 Petunia axillaris HOM05D003806 ORTHO05D004346 6.5e-07 57.4 57 57.9
MSTRG.14879 Avicennia marina HOM05D003806 ORTHO05D004346 8.5e-07 57.0 64 54.7
MD09G1138500 Malus domestica HOM05D003806 ORTHO05D004346 8.5e-07 57.0 60 58.3
Thecc.01G172500 Theobroma cacao HOM05D003806 ORTHO05D004346 1.9e-06 55.8 57 61.4
Lj1A1039T31 Lonicera japonica HOM05D003806 ORTHO05D004346 2.5e-06 55.5 57 59.6
SGA_v2.0_scaffold73G24430 Striga asiatica HOM05D003806 ORTHO05D004346 2.5e-06 55.5 62 58.1
Gohir.D11G163300 Gossypium hirsutum HOM05D003806 ORTHO05D004346 3.2e-06 55.1 57 57.9
Gorai.007G174000 Gossypium raimondii HOM05D003806 ORTHO05D004346 3.2e-06 55.1 57 57.9
Rhsim12G0014400 Rhododendron simsii HOM05D003806 ORTHO05D004346 9.4e-06 53.5 60 60.0


User provided reference genes

Program Settings