Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 1.8e-41 172.2 89 100.0
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.8e-13 78.6 68 63.2
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 2.8e-13 78.6 68 63.2
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 3.6e-13 78.2 66 63.6
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.7e-13 77.8 68 63.2
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 1.8e-12 75.9 68 57.4
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 3.0e-12 75.1 74 58.1
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 4.0e-12 74.7 68 58.8
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 4.0e-12 74.7 68 58.8
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 8.9e-12 73.6 53 71.7
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.2e-11 73.2 68 57.4
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.2e-11 73.2 68 57.4
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.5e-11 72.8 83 53.0
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 4.4e-11 71.2 66 57.6
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.7e-11 70.9 65 56.9
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 5.7e-11 70.9 69 52.2
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 5.7e-11 70.9 67 52.2
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 9.8e-11 70.1 85 45.9
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 1.7e-10 69.3 65 55.4
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 2.2e-10 68.9 65 58.5
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 2.8e-10 68.6 61 60.7
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 2.8e-10 68.6 68 54.4
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 3.7e-10 68.2 85 48.2
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.7e-10 68.2 66 56.1
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 3.7e-10 68.2 67 52.2
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 6.3e-10 67.4 68 52.9
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 8.3e-10 67.0 68 52.9
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 1.1e-09 66.6 66 50.0
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.1e-09 66.6 68 51.5
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.1e-09 66.6 66 54.5
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 1.1e-09 66.6 87 47.1
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 1.1e-09 66.6 68 50.0
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 1.4e-09 66.2 66 51.5
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 1.4e-09 66.2 83 43.4
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 1.8e-09 65.9 68 47.1
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 1.8e-09 65.9 68 48.5
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.8e-09 65.9 68 51.5
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 2.4e-09 65.5 67 49.3
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 2.4e-09 65.5 68 48.5
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 2.4e-09 65.5 68 52.9
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 3.1e-09 65.1 68 48.5
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 4.1e-09 64.7 61 60.7
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 4.1e-09 64.7 67 52.2
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 5.4e-09 64.3 65 52.3
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.2e-08 63.2 60 55.0
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 1.2e-08 63.2 72 47.2
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.6e-08 62.8 71 50.7
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.0e-08 62.4 66 51.5
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 2.0e-08 62.4 78 47.4
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.7e-08 62.0 71 50.7
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.7e-08 62.0 66 50.0
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 4.5e-08 61.2 72 54.2
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 5.9e-08 60.8 65 50.8
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 5.9e-08 60.8 65 50.8
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 7.8e-08 60.5 61 50.8
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 7.8e-08 60.5 65 50.8
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.0e-07 60.1 66 48.5
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 2.9e-07 58.5 65 46.2
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 2.9e-07 58.5 65 46.2
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.9e-07 58.5 63 50.8
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 3.9e-07 58.2 54 57.4
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 5.0e-07 57.8 66 45.5
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 5.0e-07 57.8 67 50.7
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 5.0e-07 57.8 65 46.2
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 5.0e-07 57.8 64 50.0
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 6.6e-07 57.4 68 44.1
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 6.6e-07 57.4 68 47.1
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 8.6e-07 57.0 70 48.6
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 8.6e-07 57.0 65 44.6
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 1.5e-06 56.2 67 46.3
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 2.5e-06 55.5 69 44.9
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 5.6e-06 54.3 68 41.2
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 9.5e-06 53.5 66 42.4


User provided reference genes

Program Settings