Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g03140 Coffea canephora HOM05D006672 ORTHO05D007769 2.2e-94 349.0 179 100.0
Migut.D01021 Erythranthe guttata HOM05D006672 ORTHO05D007769 2.3e-43 179.5 181 63.0
Oeu040367.1 Olea europaea HOM05D006672 ORTHO05D007769 3.0e-43 179.1 180 58.9
Nitab4.5_0008314g0010 Nicotiana tabacum HOM05D006672 ORTHO05D007769 2.2e-41 172.9 147 61.9
Nitab4.5_0001315g0240 Nicotiana tabacum HOM05D006672 ORTHO05D007769 1.1e-40 170.6 180 56.1
SGA_v2.0_scaffold4G02004 Striga asiatica HOM05D006672 ORTHO05D007769 1.5e-39 166.8 177 57.1
Sopen03g039560 Solanum pennellii HOM05D006672 ORTHO05D007769 2.9e-38 162.5 182 53.8
Dinv30493 Davidia involucrata HOM05D006672 ORTHO05D007769 6.5e-38 161.4 157 60.5
SalBow1G8254 Salvia bowleyana HOM05D000380 ORTHO05D000561 6.5e-38 161.4 183 58.5
MSTRG.22671 Avicennia marina HOM05D006672 ORTHO05D007769 4.2e-37 158.7 181 54.7
Solyc03g120740.1 Solanum lycopersicum HOM05D006672 ORTHO05D007769 7.2e-37 157.9 182 53.8
Cfa009362 Carpinus fangiana HOM05D006672 ORTHO05D007769 4.7e-36 155.2 186 51.1
Actinidia24746 Actinidia chinensis HOM05D006672 ORTHO05D007769 7.9e-36 154.5 182 53.8
Haze_12408 Corylus avellana HOM05D006672 ORTHO05D007769 8.8e-35 151.0 177 53.7
CiPaw.02G149600 Carya illinoinensis HOM05D006672 ORTHO05D007769 2.0e-34 149.8 193 49.7
ECA234G2073 Erigeron canadensis HOM05D006672 ORTHO05D007769 1.7e-33 146.7 178 52.8
Actinidia08988 Actinidia chinensis HOM05D000726 ORTHO05D007769 1.4e-32 143.7 147 61.2
vmacro16964 Vaccinium macrocarpon HOM05D006672 ORTHO05D007769 1.8e-32 143.3 194 48.5
Rhsim12G0199700 Rhododendron simsii HOM05D006672 ORTHO05D007769 4.1e-32 142.1 162 55.6
FvH4_6g31600 Fragaria vesca HOM05D006672 ORTHO05D007769 9.1e-32 141.0 151 57.0
Lsat_1_v5_gn_5_130661 Lactuca sativa HOM05D006672 ORTHO05D007769 1.5e-31 140.2 145 57.2
Hma1.2p1_2022F.1_g311340 Hydrangea macrophylla HOM05D006672 ORTHO05D007769 2.6e-31 139.4 172 52.9
FAN09G1670 Fragaria x ananassa HOM05D006672 ORTHO05D007769 5.9e-31 138.3 151 57.0
Lsat_1_v5_gn_2_34400 Lactuca sativa HOM05D008424 ORTHO05D007769 5.9e-31 138.3 181 49.2
HanXRQChr10g0313401 Helianthus annuus HOM05D006672 ORTHO05D007769 2.9e-30 136.0 179 50.8
Ciclev10026595m.g Citrus clementina HOM05D006672 ORTHO05D007769 8.5e-30 134.4 190 46.3
PGSC0003DMG400040414 Solanum tuberosum HOM05D006672 ORTHO05D007769 3.2e-29 132.5 183 47.5
DCAR_022631 Daucus carota HOM05D006672 ORTHO05D007769 8.0e-28 127.9 147 52.4
FAN14G5379 Fragaria x ananassa HOM05D006672 ORTHO05D007769 8.0e-28 127.9 151 53.6
QL05p022164 Quercus lobata HOM05D006672 ORTHO05D007769 8.0e-28 127.9 189 47.1
DCAR_026329 Daucus carota HOM05D006672 ORTHO05D007769 1.0e-27 127.5 174 48.9
Lsat_1_v5_gn_5_130760 Lactuca sativa HOM05D006672 ORTHO05D007769 1.0e-27 127.5 122 60.7
unitig_899.g14774 Utricularia gibba HOM05D006672 ORTHO05D007769 1.0e-27 127.5 170 47.6
TAR636G2852 Trochodendron aralioides HOM05D006672 ORTHO05D007769 1.4e-27 127.1 189 47.1
Prupe.3G068600 Prunus persica HOM05D006672 ORTHO05D007769 1.8e-27 126.7 185 48.6
EL10Ac9g22019 Beta vulgaris HOM05D000202 ORTHO05D000117 5.2e-27 125.2 174 48.9
Glyma.08G205200 Glycine max HOM05D006672 ORTHO05D007769 5.2e-27 125.2 183 45.4
FAN05G5736 Fragaria x ananassa HOM05D006672 ORTHO05D007769 6.7e-27 124.8 163 50.9
arahy.Tifrunner.gnm1.ann1.HW7XL7 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-26 122.9 129 55.8
RcHm_v2.0_Chr2g0138661 Rosa chinensis HOM05D006672 ORTHO05D007769 2.6e-26 122.9 183 45.9
Manes.04G128475 Manihot esculenta HOM05D006672 ORTHO05D007769 7.4e-26 121.3 198 47.0
Potri.003G053500 Populus trichocarpa HOM05D006672 ORTHO05D007769 7.4e-26 121.3 196 43.9
Atru.chr1.3318 Acer truncatum HOM05D006672 ORTHO05D007769 2.4e-24 116.3 148 50.7
arahy.Tifrunner.gnm1.ann1.ZTP7X5 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.4e-24 116.3 128 53.9
TWI75G0771 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 4.1e-24 115.5 194 44.8
MBI04_g22016_MAGBIO Magnolia biondii HOM05D006672 ORTHO05D007769 5.3e-24 115.2 187 45.5
Phvul.010G149100 Phaseolus vulgaris HOM05D006672 ORTHO05D007769 7.0e-24 114.8 185 43.8
arahy.Tifrunner.gnm1.ann1.N61AC9 Arachis hypogaea HOM05D006672 ORTHO05D007769 3.5e-23 112.5 128 54.7
arahy.Tifrunner.gnm1.ann1.MVJ1PZ Arachis hypogaea HOM05D006672 ORTHO05D007769 4.5e-23 112.1 179 46.9
TWI12G1441 Tripterygium wilfordii HOM05D006672 ORTHO05D007769 1.3e-22 110.5 193 44.0
CANSAT56G0062 Cannabis sativa HOM05D006672 ORTHO05D007769 1.7e-22 110.2 183 43.2
AUR62011637 Chenopodium quinoa HOM05D006672 ORTHO05D007769 1.7e-22 110.2 138 54.3
MD17G1192500 Malus domestica HOM05D006672 ORTHO05D007769 1.7e-22 110.2 154 47.4
Sabra03G0029900 Salix brachista HOM05D006672 ORTHO05D007769 5.0e-22 108.6 134 50.7
arahy.Tifrunner.gnm1.ann1.07RGV5 Arachis hypogaea HOM05D006672 ORTHO05D007769 8.5e-22 107.8 189 45.5
Ah.01g021520 Amaranthus hybridus HOM05D006672 ORTHO05D007769 1.9e-21 106.7 155 46.5
arahy.Tifrunner.gnm1.ann1.QF27IC Arachis hypogaea HOM05D006672 ORTHO05D007769 1.9e-21 106.7 129 51.9
VMungo0331G0342 Vigna mungo HOM05D006672 ORTHO05D007769 1.9e-21 106.7 185 43.2
arahy.Tifrunner.gnm1.ann1.C7681Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.2e-21 105.9 129 51.9
PSO782G0352 Papaver somniferum HOM05D006672 ORTHO05D007769 3.2e-21 105.9 150 46.7
Nn8g39154 Nelumbo nucifera HOM05D006672 ORTHO05D007769 4.2e-21 105.5 194 41.8
THA.LOC104800426 Tarenaya hassleriana HOM05D006672 ORTHO05D007769 4.2e-21 105.5 186 42.5
Sp1g13550 Schrenkiella parvula HOM05D006672 ORTHO05D007769 9.4e-21 104.4 187 42.2
Aqoxy7G01641 Aquilegia oxysepala HOM05D006672 ORTHO05D007769 1.2e-20 104.0 183 42.6
AL1G27320 Arabidopsis lyrata HOM05D006672 ORTHO05D007769 1.6e-20 103.6 181 43.6
Peaxi162Scf00015g00013 Petunia axillaris HOM05D006672 ORTHO05D007769 1.6e-20 103.6 176 46.0
BraA06t24303Z Brassica rapa HOM05D006672 ORTHO05D007769 2.7e-20 102.8 188 44.7
Gohir.D05G130600 Gossypium hirsutum HOM05D006672 ORTHO05D007769 4.7e-20 102.1 170 44.7
Gorai.009G134300 Gossypium raimondii HOM05D006672 ORTHO05D007769 4.7e-20 102.1 170 44.7
PSO832G0654 Papaver somniferum HOM05D006672 ORTHO05D007769 8.0e-20 101.3 149 43.6
AT1G15230 Arabidopsis thaliana HOM05D006672 ORTHO05D007769 1.4e-19 100.5 179 41.3
AUR62016468 Chenopodium quinoa HOM05D006672 ORTHO05D007769 3.0e-19 99.4 130 50.8
ClCG07G013120 Citrullus lanatus HOM05D006672 ORTHO05D007769 3.0e-19 99.4 175 42.9
arahy.Tifrunner.gnm1.ann1.K72DJ3 Arachis hypogaea HOM05D006672 ORTHO05D007769 6.8e-19 98.2 97 57.7
Thecc.06G091100 Theobroma cacao HOM05D006672 ORTHO05D007769 8.8e-19 97.8 201 39.3
arahy.Tifrunner.gnm1.ann1.HQ5KA8 Arachis hypogaea HOM05D006672 ORTHO05D007769 2.6e-18 96.3 101 52.5
Gohir.A05G131200 Gossypium hirsutum HOM05D006672 ORTHO05D007769 2.6e-18 96.3 170 42.4
Lalb_Chr25g0279941 Lupinus albus HOM05D006672 ORTHO05D007769 4.4e-18 95.5 142 45.1
MELO3C012968.2 Cucumis melo HOM05D006672 ORTHO05D007769 7.5e-18 94.7 171 40.9
BolC5t30073H Brassica oleracea HOM05D006672 ORTHO05D007769 9.8e-18 94.4 188 41.0
A06p11230 Brassica napus HOM05D006672 ORTHO05D007769 1.3e-17 94.0 188 43.1
COL.COLO4_30405 Corchorus olitorius HOM05D006672 ORTHO05D007769 1.3e-17 94.0 197 39.6
Carub.0001s1499 Capsella rubella HOM05D006672 ORTHO05D007769 2.2e-17 93.2 181 42.5
Lj3g0012066 Lotus japonicus HOM05D006672 ORTHO05D007769 2.8e-17 92.8 184 40.2
BcaB03g13070 Brassica carinata HOM05D005761 ORTHO05D007286 3.7e-17 92.4 147 44.9
BcaC05g25452 Brassica carinata HOM05D006672 ORTHO05D007769 1.1e-16 90.9 190 41.6
C05p13360 Brassica napus HOM05D006672 ORTHO05D007769 1.1e-16 90.9 190 41.6
Thhalv10008936m.g Eutrema salsugineum HOM05D006672 ORTHO05D007769 1.1e-16 90.9 188 41.5
CARHR015760 Cardamine hirsuta HOM05D006672 ORTHO05D007769 3.1e-16 89.4 178 40.4
Sed0005168 Sechium edule HOM05D006672 ORTHO05D007769 1.2e-15 87.4 185 37.3
CsaV3_3G025030 Cucumis sativus L. HOM05D006672 ORTHO05D007769 1.6e-15 87.0 144 43.8
Medtr0206s0010 Medicago truncatula HOM05D006672 ORTHO05D007769 3.5e-15 85.9 91 53.8
Ca_20375_v3 Cicer arietinum L. HOM05D006672 ORTHO05D007769 4.5e-15 85.5 122 46.7
BcaC05g25464 Brassica carinata HOM05D006672 ORTHO05D007769 5.9e-15 85.1 188 40.4
TPR.G17666 Trifolium pratense HOM05D006672 ORTHO05D007769 5.9e-15 85.1 125 50.4
Medtr4g012950 Medicago truncatula HOM05D006672 ORTHO05D007769 1.7e-14 83.6 91 51.6
Sc15g0001280 Simmondsia chinensis HOM05D006672 ORTHO05D007769 1.7e-14 83.6 185 41.1
arahy.Tifrunner.gnm1.ann1.XTGM9Z Arachis hypogaea HOM05D006672 ORTHO05D007769 3.8e-14 82.4 116 46.6
PGR102G2442 Punica granatum HOM05D006672 ORTHO05D007769 3.8e-14 82.4 184 38.6
arahy.Tifrunner.gnm1.ann1.DAY3RM Arachis hypogaea HOM05D006672 ORTHO05D007769 6.5e-14 81.6 129 45.7
CSS0000508 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 3.2e-13 79.3 132 49.2
Psat7g250280 Pisum sativum HOM05D006672 ORTHO05D007769 4.2e-13 79.0 117 46.2
Lsat_1_v5_gn_5_130640 Lactuca sativa HOM05D006672 ORTHO05D007769 5.5e-13 78.6 66 66.7
SEGI_22972 Sequoiadendron giganteum HOM05D006672 ORTHO05D007769 2.1e-12 76.6 148 37.8
AagrBONN_evm.TU.Sc2ySwM_362.2137 Anthoceros agrestis HOM05D006672 ORTHO05D007769 4.7e-12 75.5 151 37.7
CSS0037944 Camellia sinensis var. sinensis HOM05D006672 ORTHO05D007769 8.0e-12 74.7 124 43.5
Aa31LG7G40 Aethionema arabicum HOM05D006672 ORTHO05D007769 1.4e-11 73.9 134 44.0
BcaC05g25462 Brassica carinata HOM05D006672 ORTHO05D007769 1.4e-11 73.9 125 44.8
Duzib160G0370 Durio zibethinus HOM05D000726 ORTHO05D007769 1.4e-11 73.9 161 36.6
SMO364G0119 Selaginella moellendorffii HOM05D006672 ORTHO05D007769 1.8e-11 73.6 138 40.6
Duzib235G0275 Durio zibethinus HOM05D006672 ORTHO05D007769 2.3e-11 73.2 63 65.1
Mapoly0141s0006 Marchantia polymorpha HOM05D006672 ORTHO05D007769 5.7e-10 68.6 141 38.3
Rhsim06G0080600 Rhododendron simsii HOM05D006672 ORTHO05D007769 1.1e-08 64.3 73 52.1
SGA_v2.0_scaffold5G02564 Striga asiatica HOM05D000085 ORTHO05D000274 1.1e-08 64.3 143 38.5
ATR0829G196 Amborella trichopoda HOM05D006672 ORTHO05D007769 4.1e-08 62.4 141 34.8
Nitab4.5_0002600g0060 Nicotiana tabacum HOM05D006672 ORTHO05D007769 7.0e-08 61.6 102 42.2
PGR102G0682 Punica granatum HOM05D006672 ORTHO05D007769 9.1e-08 61.2 108 40.7
Atru.chr1.3332 Acer truncatum HOM05D006672 ORTHO05D007769 2.0e-07 60.1 115 40.0
Pp3c1_40010 Physcomitrium patens HOM05D006672 ORTHO05D007769 2.7e-07 59.7 166 35.5
Lsat_1_v5_gn_4_162060 Lactuca sativa HOM05D006672 ORTHO05D007769 4.5e-07 58.9 54 61.1
Zm00001eb098380 Zea mays HOM05D006672 ORTHO05D007769 1.0e-06 57.8 76 51.3
Os09g0344700 Oryza sativa ssp. japonica HOM05D006672 ORTHO05D007769 1.3e-06 57.4 82 45.1
HPP92_005483 Vanilla planifolia HOM05D006672 ORTHO05D007769 1.7e-06 57.0 155 35.5


User provided reference genes

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