Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g02770 Coffea canephora HOM05D007180 ORTHO05D009028 3.7e-202 708.0 354 100.0
GSVIVG01017035001 Vitis vinifera HOM05D007180 ORTHO05D009028 4.9e-138 495.0 322 74.2
Atru.chr1.3471 Acer truncatum HOM05D007180 ORTHO05D009028 6.4e-138 494.6 333 73.9
Ciclev10026017m.g Citrus clementina HOM05D007180 ORTHO05D009028 3.2e-137 492.3 333 71.5
Hma1.2p1_1689F.1_g297640 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 8.7e-135 484.2 321 74.5
Duzib235G1436 Durio zibethinus HOM05D007180 ORTHO05D009028 1.1e-134 483.8 319 73.7
Gorai.003G063600 Gossypium raimondii HOM05D007180 ORTHO05D009028 2.5e-134 482.6 325 72.0
FAN14G2528 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.3e-134 481.9 325 71.7
Prupe.3G062900 Prunus persica HOM05D007180 ORTHO05D009028 4.3e-134 481.9 313 73.5
RcHm_v2.0_Chr2g0139631 Rosa chinensis HOM05D007180 ORTHO05D009028 4.3e-134 481.9 325 71.7
FvH4_6g32020 Fragaria vesca HOM05D007180 ORTHO05D009028 9.6e-134 480.7 325 71.4
MD09G1206800 Malus domestica HOM05D007180 ORTHO05D009028 1.2e-133 480.3 322 71.1
Gohir.A02G119000 Gossypium hirsutum HOM05D007180 ORTHO05D009028 1.6e-133 479.9 325 71.7
Gohir.D03G059800 Gossypium hirsutum HOM05D007180 ORTHO05D009028 4.7e-133 478.4 325 71.7
QL05p020883 Quercus lobata HOM05D007180 ORTHO05D009028 8.1e-133 477.6 319 72.1
Thecc.06G096400 Theobroma cacao HOM05D007180 ORTHO05D009028 4.0e-132 475.3 324 71.6
PGR102G1587 Punica granatum HOM05D007180 ORTHO05D009028 2.0e-131 473.0 336 69.6
MD17G1187500 Malus domestica HOM05D007180 ORTHO05D009028 2.6e-131 472.6 322 70.8
FAN02G1418 Fragaria x ananassa HOM05D007180 ORTHO05D009028 4.4e-131 471.9 339 68.4
Cfa002118 Carpinus fangiana HOM05D007180 ORTHO05D009028 5.8e-131 471.5 329 69.3
THA.LOC104810533 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 5.8e-131 471.5 322 71.7
CiPaw.02G147300 Carya illinoinensis HOM05D007180 ORTHO05D009028 1.3e-130 470.3 339 67.8
Oeu060509.1 Olea europaea HOM05D007180 ORTHO05D009028 2.2e-130 469.5 322 72.4
CANSAT56G0293 Cannabis sativa HOM05D007180 ORTHO05D009028 2.9e-130 469.2 348 67.2
Actinidia39147 Actinidia chinensis HOM05D007180 ORTHO05D009028 4.9e-130 468.4 345 66.7
Nn3g18173 Nelumbo nucifera HOM05D007180 ORTHO05D009028 1.1e-129 467.2 323 69.3
Sp1g38710 Schrenkiella parvula HOM05D007180 ORTHO05D009028 1.9e-129 466.5 314 71.0
TPR.G35011 Trifolium pratense HOM05D007180 ORTHO05D009028 1.9e-129 466.5 349 65.3
Nitab4.5_0007758g0080 Nicotiana tabacum HOM05D007180 ORTHO05D009028 2.4e-129 466.1 330 70.3
Carub.0001s4110 Capsella rubella HOM05D007180 ORTHO05D009028 4.2e-129 465.3 320 70.6
Thhalv10011664m.g Eutrema salsugineum HOM05D007180 ORTHO05D009028 9.3e-129 464.2 312 71.2
Aqoxy7G03907 Aquilegia oxysepala HOM05D007180 ORTHO05D009028 1.2e-128 463.8 330 66.7
Medtr8g013830 Medicago truncatula HOM05D007180 ORTHO05D009028 1.2e-128 463.8 347 66.0
Eucgr.F03061 Eucalyptus grandis HOM05D007180 ORTHO05D009028 3.5e-128 462.2 317 71.0
Nitab4.5_0001315g0310 Nicotiana tabacum HOM05D007180 ORTHO05D009028 3.5e-128 462.2 320 70.9
THA.LOC104817969 Tarenaya hassleriana HOM05D007180 ORTHO05D009028 3.5e-128 462.2 317 70.7
TAR383G0610 Trochodendron aralioides HOM05D007180 ORTHO05D009028 4.6e-128 461.8 312 70.5
AT1G52155 Arabidopsis thaliana HOM05D007180 ORTHO05D009028 7.8e-128 461.1 320 69.7
Sopen03g039650 Solanum pennellii HOM05D007180 ORTHO05D009028 7.8e-128 461.1 324 69.4
PGSC0003DMG401002538 Solanum tuberosum HOM05D007180 ORTHO05D009028 1.0e-127 460.7 324 69.8
AL1G60250 Arabidopsis lyrata HOM05D007180 ORTHO05D009028 1.3e-127 460.3 320 69.7
Solyc03g120830.3 Solanum lycopersicum HOM05D007180 ORTHO05D009028 2.3e-127 459.5 324 69.8
Actinidia09001 Actinidia chinensis HOM05D007180 ORTHO05D009028 3.0e-127 459.1 328 69.2
CARHR042290 Cardamine hirsuta HOM05D007180 ORTHO05D009028 3.0e-127 459.1 312 70.5
Haze_16331 Corylus avellana HOM05D007180 ORTHO05D009028 3.0e-127 459.1 333 67.3
CsaV3_7G033560 Cucumis sativus L. HOM05D007180 ORTHO05D009028 6.6e-127 458.0 319 69.0
A06p02010 Brassica napus HOM05D007180 ORTHO05D009028 1.9e-126 456.4 313 70.9
BolC6t35829H Brassica oleracea HOM05D007180 ORTHO05D009028 1.9e-126 456.4 313 70.9
BraA06t23417Z Brassica rapa HOM05D007180 ORTHO05D009028 1.9e-126 456.4 313 70.9
Psat4g197600 Pisum sativum HOM05D007180 ORTHO05D009028 3.3e-126 455.7 344 64.8
Sed0016027 Sechium edule HOM05D007180 ORTHO05D009028 5.6e-126 454.9 324 67.9
Lj3g0006974 Lotus japonicus HOM05D007180 ORTHO05D009028 7.3e-126 454.5 326 68.1
Ca_11523_v3 Cicer arietinum L. HOM05D007180 ORTHO05D009028 1.3e-125 453.8 329 66.9
Glyma.08G202600 Glycine max HOM05D007180 ORTHO05D009028 2.8e-125 452.6 318 69.8
Peaxi162Scf00038g00837 Petunia axillaris HOM05D007180 ORTHO05D009028 3.6e-125 452.2 338 65.7
ClCG09G001780 Citrullus lanatus HOM05D007180 ORTHO05D009028 4.8e-125 451.8 324 68.5
Glyma.07G017400 Glycine max HOM05D007180 ORTHO05D009028 4.8e-125 451.8 322 68.9
PSO210G4764 Papaver somniferum HOM05D007180 ORTHO05D009028 8.1e-125 451.1 310 69.4
Rhsim12G0201900 Rhododendron simsii HOM05D007180 ORTHO05D009028 8.1e-125 451.1 350 66.9
PSO210G1533 Papaver somniferum HOM05D007180 ORTHO05D009028 1.4e-124 450.3 310 69.4
Aa31LG10G2730 Aethionema arabicum HOM05D007180 ORTHO05D009028 3.1e-124 449.1 323 67.2
Phvul.010G146700 Phaseolus vulgaris HOM05D007180 ORTHO05D009028 1.2e-123 447.2 333 66.1
CAN.G438.9 Capsicum annuum HOM05D007180 ORTHO05D009028 1.5e-123 446.8 324 68.2
Potri.001G187300 Populus trichocarpa HOM05D007180 ORTHO05D009028 5.8e-123 444.9 309 71.2
Lalb_Chr04g0262871 Lupinus albus HOM05D007180 ORTHO05D009028 9.9e-123 444.1 322 65.5
C06p07400 Brassica napus HOM05D007180 ORTHO05D009028 1.3e-122 443.7 339 65.2
TWI75G1824 Tripterygium wilfordii HOM05D007180 ORTHO05D009028 1.4e-121 440.3 328 65.9
MELO3C024267.2 Cucumis melo HOM05D007180 ORTHO05D009028 1.9e-121 439.9 293 71.3
Dinv30459 Davidia involucrata HOM05D007180 ORTHO05D009028 4.6e-120 435.3 290 74.5
SalBow2G0157 Salvia bowleyana HOM05D007180 ORTHO05D009028 1.3e-119 433.7 322 64.0
arahy.Tifrunner.gnm1.ann1.BL3LB4 Arachis hypogaea HOM05D007180 ORTHO05D009028 2.3e-119 433.0 331 63.4
VMungo0331G0139 Vigna mungo HOM05D007180 ORTHO05D009028 8.7e-119 431.0 331 64.7
Migut.I00923 Erythranthe guttata HOM05D007180 ORTHO05D009028 7.4e-118 427.9 313 64.2
AUR62031877 Chenopodium quinoa HOM05D007180 ORTHO05D009028 2.1e-117 426.4 311 65.3
Sc10g0007260 Simmondsia chinensis HOM05D007180 ORTHO05D009028 6.2e-117 424.9 289 69.9
HanXRQChr09g0275941 Helianthus annuus HOM05D007180 ORTHO05D009028 1.4e-116 423.7 320 63.1
Lsat_1_v5_gn_4_100560 Lactuca sativa HOM05D007180 ORTHO05D009028 1.2e-115 420.6 320 63.8
Lj5A56T50 Lonicera japonica HOM05D007180 ORTHO05D009028 5.8e-115 418.3 301 70.8
TAR626G1393 Trochodendron aralioides HOM05D007180 ORTHO05D009028 2.2e-114 416.4 316 64.9
AUR62022171 Chenopodium quinoa HOM05D007180 ORTHO05D009028 8.4e-114 414.5 340 60.0
EL10Ac9g22108 Beta vulgaris HOM05D007180 ORTHO05D009028 1.2e-112 410.6 312 64.1
BcaC08g43372 Brassica carinata HOM05D007180 ORTHO05D009028 6.7e-111 404.8 279 70.3
Manes.11G035900 Manihot esculenta HOM05D007180 ORTHO05D009028 1.8e-103 380.2 322 59.0
vmacro16982 Vaccinium macrocarpon HOM05D007180 ORTHO05D009028 6.7e-103 378.3 338 58.3
Os11g0466300 Oryza sativa ssp. japonica HOM05D007180 ORTHO05D009028 2.6e-99 366.3 332 52.4
Ah.01g021850 Amaranthus hybridus HOM05D007180 ORTHO05D009028 3.4e-99 365.9 254 70.5
Hma1.2p1_1689F.1_g297650 Hydrangea macrophylla HOM05D007180 ORTHO05D009028 3.4e-99 365.9 242 75.2
CSS0022642 Camellia sinensis var. sinensis HOM05D007180 ORTHO05D009028 6.5e-98 361.7 256 71.1
Zm00001eb156840 Zea mays HOM05D007180 ORTHO05D009028 6.5e-98 361.7 306 55.6
Hund06649 Selenicereus undatus HOM05D007180 ORTHO05D009028 6.7e-95 351.7 329 56.2
arahy.Tifrunner.gnm1.ann1.Z8Y5NA Arachis hypogaea HOM05D007180 ORTHO05D009028 5.7e-94 348.6 318 57.5
Mapoly0061s0142 Marchantia polymorpha HOM05D007180 ORTHO05D009028 8.2e-93 344.7 307 53.7
AagrBONN_evm.TU.Sc2ySwM_344.297 Anthoceros agrestis HOM05D007180 ORTHO05D009028 6.5e-90 335.1 308 51.9
SEGI_07196 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.7e-85 320.5 339 47.8
SEGI_18381 Sequoiadendron giganteum HOM05D007180 ORTHO05D009028 1.7e-85 320.5 339 47.8
SGA_v2.0_scaffold5G02533 Striga asiatica HOM05D007180 ORTHO05D009028 2.8e-85 319.7 327 51.7
Pp3c4_2280 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.4e-84 316.6 307 47.9
Pp3c27_6190 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.5e-81 306.6 312 47.4
Pp3c3_33050 Physcomitrium patens HOM05D007180 ORTHO05D009028 7.2e-81 305.1 319 46.4
Pp3c5_1000 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.3e-79 300.1 305 47.9
Pp3c10_19810 Physcomitrium patens HOM05D007180 ORTHO05D009028 2.6e-78 296.6 307 46.6
Pp3c12_14730 Physcomitrium patens HOM05D007180 ORTHO05D009028 6.3e-77 292.0 307 45.3
ECA232G5021 Erigeron canadensis HOM05D000415 ORTHO05D001916 1.8e-76 290.4 220 64.1
ATR0705G160 Amborella trichopoda HOM05D007180 ORTHO05D009028 4.1e-76 289.3 261 54.8
unitig_748.g7435 Utricularia gibba HOM05D007180 ORTHO05D009028 9.1e-76 288.1 325 45.5
DCAR_016200 Daucus carota HOM05D007180 ORTHO05D009028 2.9e-74 283.1 330 46.1
Cpa.g.sc109.35 Carica papaya HOM05D007180 ORTHO05D009028 5.2e-63 245.7 309 46.3
SMO364G0215 Selaginella moellendorffii HOM05D007180 ORTHO05D009028 4.7e-56 222.6 213 52.6
FAN05G1983 Fragaria x ananassa HOM05D002582 ORTHO05D002781 8.9e-39 165.2 103 71.8
MBI04_g27060_MAGBIO Magnolia biondii HOM05D007180 ORTHO05D009028 3.4e-30 136.7 110 58.2
FAN09G3228 Fragaria x ananassa HOM05D007180 ORTHO05D009028 2.3e-26 124.0 132 50.8
vmacro02767 Vaccinium macrocarpon HOM05D063291 ORTHO05D009028 8.1e-08 62.4 40 72.5


User provided reference genes

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