Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g02690 Coffea canephora HOM05D008072 ORTHO05D010204 8.9e-54 213.4 111 100.0
Oeu060494.1 Olea europaea HOM05D008072 ORTHO05D010204 1.9e-27 125.9 111 58.6
Peaxi162Scf00038g00843 Petunia axillaris HOM05D008072 ORTHO05D010204 3.5e-26 121.7 113 56.6
Dinv37992 Davidia involucrata HOM05D008072 ORTHO05D010204 1.0e-25 120.2 111 58.6
Hma1.2p1_3269F.1_g334750 Hydrangea macrophylla HOM05D008072 ORTHO05D010204 3.7e-23 111.7 113 54.0
TAR626G1017 Trochodendron aralioides HOM05D008072 ORTHO05D010204 6.9e-22 107.5 108 52.8
Potri.001G188400 Populus trichocarpa HOM05D008072 ORTHO05D010204 9.0e-22 107.1 112 54.5
Rhsim12G0202400 Rhododendron simsii HOM05D008072 ORTHO05D010204 1.5e-21 106.3 113 54.9
PGSC0003DMG400002533 Solanum tuberosum HOM05D008072 ORTHO05D010204 1.5e-21 106.3 113 53.1
Sopen03g039710 Solanum pennellii HOM05D008072 ORTHO05D010204 3.8e-20 101.7 112 51.8
Actinidia09003 Actinidia chinensis HOM05D008072 ORTHO05D010204 1.1e-19 100.1 112 50.9
Prupe.3G061100 Prunus persica HOM05D008072 ORTHO05D010204 3.2e-19 98.6 116 49.1
CSS0040470 Camellia sinensis var. sinensis HOM05D008072 ORTHO05D010204 4.2e-19 98.2 120 52.5
Solyc03g120880.4 Solanum lycopersicum HOM05D004877 ORTHO05D005942 9.3e-19 97.1 108 50.9
SalBow7G3462 Salvia bowleyana HOM05D008072 ORTHO05D010204 3.5e-18 95.1 115 53.9
PGR102G0255 Punica granatum HOM05D008072 ORTHO05D010204 1.3e-17 93.2 118 44.9
RcHm_v2.0_Chr2g0140071 Rosa chinensis HOM05D008072 ORTHO05D010204 3.0e-17 92.0 116 44.0
MSTRG.9481 Avicennia marina HOM05D008072 ORTHO05D010204 3.9e-17 91.7 114 50.0
Thecc.06G097600 Theobroma cacao HOM05D008072 ORTHO05D010204 3.9e-17 91.7 113 49.6
HanXRQChr16g0501221 Helianthus annuus HOM05D008072 ORTHO05D010204 6.7e-17 90.9 113 46.0
Aqoxy7G01464 Aquilegia oxysepala HOM05D008072 ORTHO05D010204 1.5e-16 89.7 112 43.8
Sabra01G0152600 Salix brachista HOM05D008072 ORTHO05D010204 3.3e-16 88.6 116 46.6
QL05p020523 Quercus lobata HOM05D008072 ORTHO05D010204 5.7e-16 87.8 110 48.2
Atru.chr1.3499 Acer truncatum HOM05D008072 ORTHO05D010204 7.4e-16 87.4 121 44.6
FAN02G2294 Fragaria x ananassa HOM05D008072 ORTHO05D010204 9.7e-16 87.0 117 42.7
MD17G1186400 Malus domestica HOM05D008072 ORTHO05D010204 9.7e-16 87.0 115 47.0
GSVIVG01017012001 Vitis vinifera HOM05D008072 ORTHO05D010204 9.7e-16 87.0 111 42.3
FvH4_6g32180 Fragaria vesca HOM05D008072 ORTHO05D010204 1.6e-15 86.3 117 41.9
FAN14G4057 Fragaria x ananassa HOM05D008072 ORTHO05D010204 2.2e-15 85.9 117 42.7
FAN05G4246 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.3e-15 84.3 117 41.0
FAN09G3706 Fragaria x ananassa HOM05D008072 ORTHO05D010204 6.3e-15 84.3 117 41.9
Nn2g11609 Nelumbo nucifera HOM05D008072 ORTHO05D010204 2.4e-14 82.4 111 39.6
Nitab4.5_0001755g0100 Nicotiana tabacum HOM05D008072 ORTHO05D010204 2.4e-14 82.4 73 58.9
Manes.04G132700 Manihot esculenta HOM05D008072 ORTHO05D010204 3.1e-14 82.0 118 46.6
Haze_15831 Corylus avellana HOM05D008072 ORTHO05D010204 1.2e-13 80.1 159 35.2
Nn8g39117 Nelumbo nucifera HOM05D008072 ORTHO05D010204 1.2e-13 80.1 111 40.5
Gohir.D03G059100 Gossypium hirsutum HOM05D008072 ORTHO05D010204 1.5e-13 79.7 98 44.9
Sed0011388 Sechium edule HOM05D008072 ORTHO05D010204 1.5e-13 79.7 111 49.5
Ciclev10026797m.g Citrus clementina HOM05D008072 ORTHO05D010204 2.0e-13 79.3 111 44.1
Cpa.g.c31416 Carica papaya HOM05D008072 ORTHO05D010204 2.6e-13 79.0 114 45.6
Gorai.003G063000 Gossypium raimondii HOM05D008072 ORTHO05D010204 3.4e-13 78.6 98 44.9
Duzib192G0771 Durio zibethinus HOM05D008072 ORTHO05D010204 5.9e-13 77.8 120 41.7
ECA232G1650 Erigeron canadensis HOM05D004877 ORTHO05D005942 7.6e-13 77.4 101 42.6
Gohir.A02G118500 Gossypium hirsutum HOM05D008072 ORTHO05D010204 7.6e-13 77.4 98 43.9
Lsat_1_v5_gn_4_99940 Lactuca sativa HOM05D008072 ORTHO05D010204 1.0e-12 77.0 100 41.0
CsaV3_7G035400 Cucumis sativus L. HOM05D008072 ORTHO05D010204 1.3e-12 76.6 117 45.3
SGA_v2.0_scaffold4G02017 Striga asiatica HOM05D008072 ORTHO05D010204 5.0e-12 74.7 121 40.5
ClCG09G000070 Citrullus lanatus HOM05D008072 ORTHO05D010204 1.1e-11 73.6 111 45.0
TWI18G1284 Tripterygium wilfordii HOM05D008072 ORTHO05D010204 1.9e-11 72.8 117 40.2
MELO3C024449.2 Cucumis melo HOM05D008072 ORTHO05D010204 9.4e-11 70.5 111 43.2
VMungo0331G2041 Vigna mungo HOM05D008072 ORTHO05D010204 1.6e-10 69.7 116 44.8
Phvul.010G146400 Phaseolus vulgaris HOM05D008072 ORTHO05D010204 2.1e-10 69.3 116 43.1
Lj3g0001751 Lotus japonicus HOM05D008072 ORTHO05D010204 2.7e-10 68.9 115 41.7
TPR.G35014 Trifolium pratense HOM05D008072 ORTHO05D010204 2.7e-10 68.9 115 43.5
EL10Ac9g22100 Beta vulgaris HOM05D008072 ORTHO05D010204 4.6e-10 68.2 124 39.5
Lalb_Chr04g0262911 Lupinus albus HOM05D008072 ORTHO05D010204 4.6e-10 68.2 111 40.5
Oeu063939.2 Olea europaea HOM05D000181 ORTHO05D008575 1.4e-09 66.6 134 35.8
Glyma.07G016900 Glycine max HOM05D008072 ORTHO05D010204 1.8e-09 66.2 117 40.2
Sc10g0007210 Simmondsia chinensis HOM05D008072 ORTHO05D010204 2.3e-09 65.9 118 36.4
MD09G1205700 Malus domestica HOM05D008072 ORTHO05D010204 3.9e-09 65.1 113 37.2
CANSAT56G4142 Cannabis sativa HOM05D008072 ORTHO05D010204 6.7e-09 64.3 119 37.8
Cfa003662 Carpinus fangiana HOM05D008072 ORTHO05D010204 1.5e-08 63.2 91 40.7
Glyma.08G202200 Glycine max HOM05D008072 ORTHO05D010204 4.3e-08 61.6 112 37.5
MBI01_g42894_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 7.4e-08 60.8 107 39.3
SEGI_35585 Sequoiadendron giganteum HOM05D008072 ORTHO05D010204 1.7e-07 59.7 61 49.2
Medtr8g013930 Medicago truncatula HOM05D008072 ORTHO05D010204 1.1e-06 57.0 118 33.9
MBI04_g06582_MAGBIO Magnolia biondii HOM05D008072 ORTHO05D010204 1.8e-06 56.2 93 44.1
Hund06655 Selenicereus undatus HOM05D008072 ORTHO05D010204 1.8e-06 56.2 106 36.8
Hund31378 Selenicereus undatus HOM05D008072 ORTHO05D010204 3.1e-06 55.5 106 36.8
arahy.Tifrunner.gnm1.ann1.XD1M86 Arachis hypogaea HOM05D008072 ORTHO05D010204 6.9e-06 54.3 106 37.7
Psat4g197480 Pisum sativum HOM05D008072 ORTHO05D010204 6.9e-06 54.3 113 38.1


User provided reference genes

Program Settings