Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g02270 Coffea canephora HOM05D005017 ORTHO05D006044 1.9e-120 436.0 245 100.0
Thecc.06G107700 Theobroma cacao HOM05D005017 ORTHO05D006044 2.6e-98 362.5 243 81.5
Actinidia21740 Actinidia chinensis HOM05D005017 ORTHO05D006044 5.9e-98 361.3 247 79.8
MSTRG.22609 Avicennia marina HOM05D005017 ORTHO05D006044 1.7e-97 359.8 246 80.1
Ciclev10026315m.g Citrus clementina HOM05D005017 ORTHO05D006044 8.5e-97 357.5 247 81.8
Nitab4.5_0004848g0030 Nicotiana tabacum HOM05D005017 ORTHO05D006044 8.5e-97 357.5 239 82.4
Gohir.A02G116100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 3.2e-96 355.5 245 81.2
Dinv30400 Davidia involucrata HOM05D005017 ORTHO05D006044 4.2e-96 355.1 243 79.8
SGA_v2.0_scaffold71G23756 Striga asiatica HOM05D005017 ORTHO05D006044 4.2e-96 355.1 247 80.6
Gohir.D03G057100 Gossypium hirsutum HOM05D005017 ORTHO05D006044 7.2e-96 354.4 241 82.2
Gorai.003G060200 Gossypium raimondii HOM05D005017 ORTHO05D006044 1.6e-95 353.2 241 81.7
Duzib235G0510 Durio zibethinus HOM05D005017 ORTHO05D006044 2.7e-95 352.4 244 80.7
Nitab4.5_0006071g0010 Nicotiana tabacum HOM05D005017 ORTHO05D006044 3.0e-94 349.0 234 82.1
CiPaw.01G227300 Carya illinoinensis HOM05D005017 ORTHO05D006044 1.5e-93 346.7 245 75.9
GSVIVG01016892001 Vitis vinifera HOM05D005017 ORTHO05D006044 4.3e-93 345.1 247 80.2
Atru.chr1.3634 Acer truncatum HOM05D005017 ORTHO05D006044 9.7e-93 344.0 242 80.6
Dinv37934 Davidia involucrata HOM05D005017 ORTHO05D006044 2.2e-92 342.8 247 80.2
Nn8g38928 Nelumbo nucifera HOM05D005017 ORTHO05D006044 6.3e-92 341.3 247 78.5
Cpa.g.sc663.1 Carica papaya HOM05D005017 ORTHO05D006044 3.1e-91 339.0 248 75.8
MELO3C024403.2 Cucumis melo HOM05D005017 ORTHO05D006044 3.1e-91 339.0 245 78.4
COL.COLO4_30606 Corchorus olitorius HOM05D005017 ORTHO05D006044 4.1e-91 338.6 244 77.9
CsaV3_7G034910 Cucumis sativus L. HOM05D005017 ORTHO05D006044 4.1e-91 338.6 245 78.4
Potri.001G199500 Populus trichocarpa HOM05D005017 ORTHO05D006044 4.1e-91 338.6 245 75.1
CSS0030454 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 1.2e-90 337.0 243 75.7
Rhsim08G0231100 Rhododendron simsii HOM05D005017 ORTHO05D006044 1.2e-90 337.0 257 74.7
ClCG09G000540 Citrullus lanatus HOM05D005017 ORTHO05D006044 1.5e-90 336.7 244 76.6
TAR624G0026 Trochodendron aralioides HOM05D005017 ORTHO05D006044 1.5e-90 336.7 247 76.9
PGR102G3241 Punica granatum HOM05D005017 ORTHO05D006044 5.9e-90 334.7 246 79.7
Manes.04G137400 Manihot esculenta HOM05D005017 ORTHO05D006044 7.7e-90 334.3 247 76.5
Sed0003007 Sechium edule HOM05D005017 ORTHO05D006044 1.7e-89 333.2 244 78.3
Ah.01g016970 Amaranthus hybridus HOM05D005017 ORTHO05D006044 2.9e-89 332.4 248 77.4
Sopen03g040120 Solanum pennellii HOM05D005017 ORTHO05D006044 6.5e-89 331.3 240 77.9
Atru.chr1.3630 Acer truncatum HOM05D005017 ORTHO05D006044 1.1e-88 330.5 235 80.0
HanXRQChr04g0095781 Helianthus annuus HOM05D005017 ORTHO05D006044 3.2e-88 328.9 245 78.4
CAN.G1668.3 Capsicum annuum HOM05D005017 ORTHO05D006044 4.2e-88 328.6 240 77.1
CANSAT56G3588 Cannabis sativa HOM05D005017 ORTHO05D006044 5.5e-88 328.2 247 72.5
AL1G59670 Arabidopsis lyrata HOM05D005017 ORTHO05D006044 7.2e-88 327.8 242 75.2
Prupe.3G052700 Prunus persica HOM05D005017 ORTHO05D006044 1.2e-87 327.0 244 75.4
PGSC0003DMG401002511 Solanum tuberosum HOM05D005017 ORTHO05D006044 1.6e-87 326.6 240 77.1
MD17G1177100 Malus domestica HOM05D005017 ORTHO05D006044 6.1e-87 324.7 246 75.2
Migut.I00995 Erythranthe guttata HOM05D005017 ORTHO05D006044 1.8e-86 323.2 234 74.4
Potri.001G193700 Populus trichocarpa HOM05D005017 ORTHO05D006044 1.8e-86 323.2 245 76.3
MD09G1196300 Malus domestica HOM05D005017 ORTHO05D006044 3.9e-86 322.0 244 75.0
Thhalv10011475m.g Eutrema salsugineum HOM05D005017 ORTHO05D006044 6.7e-86 321.2 243 74.9
Sp1g38370 Schrenkiella parvula HOM05D005017 ORTHO05D006044 1.1e-85 320.5 242 73.6
TWI79G0337 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 1.5e-85 320.1 243 77.4
Aa31LG10G3080 Aethionema arabicum HOM05D005017 ORTHO05D006044 2.0e-85 319.7 242 73.1
AT1G51730 Arabidopsis thaliana HOM05D005017 ORTHO05D006044 2.6e-85 319.3 242 72.7
CARHR041890 Cardamine hirsuta HOM05D005017 ORTHO05D006044 2.6e-85 319.3 242 74.4
Hma1.2p1_0679F.1_g202280 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 2.6e-85 319.3 243 77.8
Carub.0001s4060 Capsella rubella HOM05D005017 ORTHO05D006044 3.3e-85 318.9 242 73.6
C03p90280 Brassica napus HOM05D005017 ORTHO05D006044 9.7e-85 317.4 237 74.3
RcHm_v2.0_Chr2g0142451 Rosa chinensis HOM05D005017 ORTHO05D006044 9.7e-85 317.4 246 76.4
BraA08t32293Z Brassica rapa HOM05D005017 ORTHO05D006044 1.3e-84 317.0 237 74.3
Eucgr.F03103 Eucalyptus grandis HOM05D005017 ORTHO05D006044 1.3e-84 317.0 244 75.8
FAN14G3976 Fragaria x ananassa HOM05D005017 ORTHO05D006044 6.3e-84 314.7 247 75.3
MBI01_g27633_MAGBIO Magnolia biondii HOM05D005017 ORTHO05D006044 6.3e-84 314.7 244 70.9
VMungo0331G1330 Vigna mungo HOM05D005017 ORTHO05D006044 6.3e-84 314.7 246 71.1
Peaxi162Scf00038g01246 Petunia axillaris HOM05D005017 ORTHO05D006044 1.1e-83 313.9 192 80.2
Lsat_1_v5_gn_1_36441 Lactuca sativa HOM05D005017 ORTHO05D006044 1.4e-83 313.5 239 75.7
Solyc03g121310.2 Solanum lycopersicum HOM05D005017 ORTHO05D006044 1.8e-83 313.2 247 74.5
Lalb_Chr01g0013321 Lupinus albus HOM05D005017 ORTHO05D006044 2.4e-83 312.8 250 74.0
THA.LOC104817935 Tarenaya hassleriana HOM05D005017 ORTHO05D006044 2.4e-83 312.8 247 72.5
A08p02530 Brassica napus HOM05D005017 ORTHO05D006044 3.1e-83 312.4 237 73.4
Ca_23294_v3 Cicer arietinum L. HOM05D005017 ORTHO05D006044 4.1e-83 312.0 245 70.2
A05p19400 Brassica napus HOM05D005017 ORTHO05D006044 5.3e-83 311.6 236 73.3
BolC6t36489H Brassica oleracea HOM05D005017 ORTHO05D006044 6.9e-83 311.2 237 72.6
Glyma.07G012600 Glycine max HOM05D005017 ORTHO05D006044 1.2e-82 310.5 246 70.7
Phvul.010G142100 Phaseolus vulgaris HOM05D005017 ORTHO05D006044 2.6e-82 309.3 243 71.2
TPR.G8766 Trifolium pratense HOM05D005017 ORTHO05D006044 3.4e-82 308.9 246 72.0
Lj3g0014772 Lotus japonicus HOM05D005017 ORTHO05D006044 7.7e-82 307.8 247 73.7
EL10Ac9g21132 Beta vulgaris HOM05D005017 ORTHO05D006044 1.3e-81 307.0 234 76.5
Medtr8g015590 Medicago truncatula HOM05D005017 ORTHO05D006044 2.2e-81 306.2 247 70.9
ECA247G1989 Erigeron canadensis HOM05D005017 ORTHO05D006044 3.8e-81 305.4 245 73.1
FAN09G3568 Fragaria x ananassa HOM05D005017 ORTHO05D006044 3.8e-81 305.4 247 73.7
BolC3t21350H Brassica oleracea HOM05D005017 ORTHO05D006044 5.0e-81 305.1 238 73.1
DCAR_026373 Daucus carota HOM05D005017 ORTHO05D006044 5.0e-81 305.1 273 67.0
Glyma.08G196300 Glycine max HOM05D005017 ORTHO05D006044 5.0e-81 305.1 244 70.9
Psat4g194480 Pisum sativum HOM05D005017 ORTHO05D006044 8.5e-81 304.3 247 71.3
BraA05t20844Z Brassica rapa HOM05D005017 ORTHO05D006044 1.1e-80 303.9 243 70.4
FvH4_6g32940 Fragaria vesca HOM05D005017 ORTHO05D006044 1.9e-80 303.1 247 73.3
ATR0789G068 Amborella trichopoda HOM05D005017 ORTHO05D006044 3.2e-80 302.4 234 68.4
Lj5C49T18 Lonicera japonica HOM05D005017 ORTHO05D006044 1.2e-79 300.4 193 77.2
Sc12g0009900 Simmondsia chinensis HOM05D005017 ORTHO05D006044 1.2e-79 300.4 206 74.3
Lalb_Chr04g0263111 Lupinus albus HOM05D005017 ORTHO05D006044 2.1e-79 299.7 246 72.0
BcaC01g01293 Brassica carinata HOM05D005017 ORTHO05D006044 4.7e-79 298.5 257 68.1
Cfa003607 Carpinus fangiana HOM05D005017 ORTHO05D006044 4.7e-79 298.5 228 69.3
TWI31G0253 Tripterygium wilfordii HOM05D005017 ORTHO05D006044 4.7e-79 298.5 242 71.9
AUR62038338 Chenopodium quinoa HOM05D005017 ORTHO05D006044 6.1e-79 298.1 237 73.4
Aqoxy2G03852 Aquilegia oxysepala HOM05D005017 ORTHO05D006044 1.0e-78 297.4 243 70.8
HPP92_023230 Vanilla planifolia HOM05D005017 ORTHO05D006044 2.3e-78 296.2 237 69.2
AUR62023908 Chenopodium quinoa HOM05D005017 ORTHO05D006044 3.9e-78 295.4 237 72.6
QL05p015800 Quercus lobata HOM05D005017 ORTHO05D006044 3.9e-78 295.4 337 53.4
SEGI_04320 Sequoiadendron giganteum HOM05D005017 ORTHO05D006044 3.9e-78 295.4 241 69.7
HanXRQChr12g0360701 Helianthus annuus HOM05D005017 ORTHO05D006044 5.2e-78 295.0 238 69.7
CDE05G2485 Ceratophyllum demersum HOM05D005017 ORTHO05D006044 1.5e-77 293.5 235 69.4
Os01g0558300 Oryza sativa ssp. japonica HOM05D005017 ORTHO05D006044 3.3e-77 292.4 238 69.3
Zm00001eb162290 Zea mays HOM05D005017 ORTHO05D006044 3.3e-77 292.4 238 69.3
vmacro18822 Vaccinium macrocarpon HOM05D005017 ORTHO05D006044 9.7e-77 290.8 273 65.9
Lsat_1_v5_gn_5_133981 Lactuca sativa HOM05D005017 ORTHO05D006044 3.7e-76 288.9 241 70.5
Ah.01g004460 Amaranthus hybridus HOM05D005017 ORTHO05D006044 8.2e-76 287.7 288 62.8
C06p13290 Brassica napus HOM05D005017 ORTHO05D006044 1.8e-75 286.6 235 70.2
BcaC08g43934 Brassica carinata HOM05D005017 ORTHO05D006044 1.2e-74 283.9 235 69.8
arahy.Tifrunner.gnm1.ann1.TCAK26 Arachis hypogaea HOM05D005017 ORTHO05D006044 2.2e-73 279.6 245 69.4
arahy.Tifrunner.gnm1.ann1.ZK2LT4 Arachis hypogaea HOM05D005017 ORTHO05D006044 8.5e-73 277.7 244 69.7
SalBow6G5092 Salvia bowleyana HOM05D005017 ORTHO05D006044 1.5e-72 276.9 239 67.8
unitig_0.g2868 Utricularia gibba HOM05D005017 ORTHO05D006044 2.1e-71 273.1 245 62.9
PSO210G2569 Papaver somniferum HOM05D005017 ORTHO05D006044 2.7e-71 272.7 244 66.0
SGA_v2.0_scaffold45G16987 Striga asiatica HOM05D005017 ORTHO05D006044 6.1e-71 271.6 246 67.9
Mapoly0076s0035 Marchantia polymorpha HOM05D005017 ORTHO05D006044 1.8e-70 270.0 241 63.1
FAN05G4929 Fragaria x ananassa HOM05D005017 ORTHO05D006044 2.2e-68 263.1 325 54.5
Haze_15918 Corylus avellana HOM05D005017 ORTHO05D006044 5.9e-66 255.0 178 72.5
Sabra01G0156200 Salix brachista HOM05D000200 ORTHO05D000262 8.5e-65 251.1 279 54.1
ECA234G0069 Erigeron canadensis HOM05D005017 ORTHO05D006044 1.4e-62 243.8 240 61.7
Pp3c5_13990 Physcomitrium patens HOM05D005017 ORTHO05D006044 8.8e-62 241.1 240 60.0
Pp3c27_5930 Physcomitrium patens HOM05D005017 ORTHO05D006044 2.0e-61 240.0 238 58.4
Lj9A517T55 Lonicera japonica HOM05D005017 ORTHO05D006044 9.1e-59 231.1 216 59.7
Gohir.A05G133633 Gossypium hirsutum HOM05D005017 ORTHO05D006044 2.7e-58 229.6 191 65.4
Actinidia32130 Actinidia chinensis HOM05D005017 ORTHO05D006044 2.3e-57 226.5 234 59.4
SMO300G0020 Selaginella moellendorffii HOM05D005017 ORTHO05D006044 4.2e-56 222.2 237 57.8
Oeu052817.1 Olea europaea HOM05D005017 ORTHO05D006044 4.7e-55 218.8 136 80.9
Zm00001eb356680 Zea mays HOM05D005017 ORTHO05D006044 6.1e-55 218.4 238 58.0
CBR_g78883 Chara braunii HOM05D005017 ORTHO05D006044 4.0e-54 215.7 220 54.1
Gorai.009G139400 Gossypium raimondii HOM05D005017 ORTHO05D006044 7.0e-51 204.9 130 79.2
BcaB07g33629 Brassica carinata HOM05D005017 ORTHO05D006044 2.0e-50 203.4 166 69.9
CSS0006284 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 5.9e-50 201.8 140 72.1
Hma1.2p1_0679F.1_g202290 Hydrangea macrophylla HOM05D005017 ORTHO05D006044 8.9e-46 188.0 149 77.2
Gohir.D05G135550 Gossypium hirsutum HOM05D005017 ORTHO05D006044 6.4e-44 181.8 133 70.7
PSO170G1437 Papaver somniferum HOM05D005017 ORTHO05D006044 5.6e-40 168.7 118 71.2
BcaB02g11274 Brassica carinata HOM05D005017 ORTHO05D006044 7.3e-40 168.3 192 52.1
Duzib192G1032 Durio zibethinus HOM05D005017 ORTHO05D006044 2.6e-37 159.8 248 43.5
A06p02280 Brassica napus HOM05D005017 ORTHO05D006044 1.3e-36 157.5 199 57.3
FAN02G2875 Fragaria x ananassa HOM05D005017 ORTHO05D006044 3.9e-33 146.0 332 41.6
Oeu052818.1 Olea europaea HOM05D005017 ORTHO05D006044 3.3e-32 142.9 120 75.8
Cre03.g201776 Chlamydomonas reinhardtii HOM05D005017 ORTHO05D006044 4.3e-32 142.5 219 39.7
Aa31csc1849G10 Aethionema arabicum HOM05D005017 ORTHO05D006044 2.3e-30 136.7 108 75.0
PRCOL_00005001 Prasinoderma coloniale HOM05D005017 ORTHO05D006044 4.4e-29 132.5 227 40.5
MCO07G323 Micromonas commoda HOM05D005017 ORTHO05D006044 1.3e-28 131.0 245 40.8
Oeu026734.1 Olea europaea HOM05D005017 ORTHO05D006044 1.0e-25 121.3 72 84.7
PSO782G0965 Papaver somniferum HOM05D005017 ORTHO05D006044 1.5e-24 117.5 91 63.7
Aa31LG1G17240 Aethionema arabicum HOM05D005017 ORTHO05D006044 1.4e-22 110.9 58 87.9
PSO135G0227 Papaver somniferum HOM05D005017 ORTHO05D006044 3.8e-20 102.8 78 64.1
PSO675G1433 Papaver somniferum HOM05D005017 ORTHO05D006044 4.1e-19 99.4 78 62.8
CSS0004179 Camellia sinensis var. sinensis HOM05D005017 ORTHO05D006044 1.4e-14 84.3 78 71.8
Cfa022882 Carpinus fangiana HOM05D005017 ORTHO05D006044 1.6e-10 70.9 158 35.4
Hund07663 Selenicereus undatus HOM05D001165 ORTHO05D010360 2.1e-07 60.5 54 55.6
Migut.I01159 Erythranthe guttata HOM05D005017 ORTHO05D006044 3.6e-07 59.7 64 48.4
TAR383G0476 Trochodendron aralioides HOM05D005017 ORTHO05D006044 6.2e-07 58.9 34 73.5
Pp3c6_13820 Physcomitrium patens HOM05D005017 ORTHO05D006044 1.1e-06 58.2 184 29.9


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