Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 7.5e-98 360.5 183 100.0
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 5.6e-69 264.6 173 75.1
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 9.5e-69 263.8 173 75.1
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 2.1e-68 262.7 172 73.3
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.1e-68 262.7 175 73.7
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.1e-68 262.7 173 74.0
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.3e-67 259.2 175 73.7
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.2e-67 258.1 186 67.7
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 6.8e-67 257.7 176 72.7
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.2e-66 256.9 178 70.8
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 7.5e-66 254.2 181 70.7
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 1.3e-65 253.4 175 70.9
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 8.3e-65 250.8 159 76.7
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 1.1e-64 250.4 160 73.1
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 1.1e-64 250.4 187 70.1
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.1e-64 250.4 166 71.7
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 1.4e-64 250.0 173 69.4
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 9.2e-64 247.3 160 73.1
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 3.5e-63 245.4 184 65.2
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 3.5e-63 245.4 176 69.9
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 4.6e-63 245.0 172 69.8
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 7.8e-63 244.2 179 69.8
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.0e-62 243.8 186 65.6
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 1.3e-62 243.4 175 69.7
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.7e-62 243.0 181 65.7
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 2.3e-62 242.7 168 68.5
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.0e-62 242.3 166 69.3
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.9e-62 241.9 154 73.4
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 6.6e-62 241.1 173 68.2
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.1e-61 240.4 172 68.0
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.1e-61 240.4 175 69.7
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 1.1e-61 240.4 183 65.0
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.1e-61 240.4 165 69.7
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.9e-61 239.6 178 69.1
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.9e-61 239.6 173 67.1
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 1.9e-61 239.6 149 75.8
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 1.9e-61 239.6 183 66.7
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.9e-61 239.6 165 68.5
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 2.5e-61 239.2 179 68.7
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.3e-61 238.4 175 68.0
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 4.3e-61 238.4 175 68.6
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 5.6e-61 238.0 182 63.7
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 2.1e-60 236.1 166 66.9
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 1.1e-59 233.8 167 65.3
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 1.1e-59 233.8 173 68.8
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 1.1e-59 233.8 160 66.9
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.1e-59 233.8 174 67.8
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 1.8e-59 233.0 161 70.2
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 3.1e-59 232.3 167 68.9
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 6.8e-59 231.1 170 63.5
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.2e-58 230.3 166 67.5
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 1.2e-58 230.3 174 64.4
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.4e-58 228.8 167 66.5
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 3.4e-58 228.8 166 69.3
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.4e-58 228.4 167 65.9
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 5.8e-58 228.0 159 69.8
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 5.8e-58 228.0 177 66.7
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 7.5e-58 227.6 168 65.5
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 9.9e-58 227.3 166 66.9
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 9.9e-58 227.3 173 61.8
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 9.9e-58 227.3 167 65.9
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 1.7e-57 226.5 168 64.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 2.2e-57 226.1 165 66.7
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 3.7e-57 225.3 169 62.7
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 6.4e-57 224.6 169 62.1
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 8.3e-57 224.2 169 62.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 8.3e-57 224.2 168 69.0
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.9e-56 223.0 173 60.1
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 3.2e-56 222.2 165 62.4
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 4.1e-56 221.9 167 60.5
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 4.1e-56 221.9 167 60.5
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 4.1e-56 221.9 138 80.4
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 5.4e-56 221.5 171 64.3
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 9.2e-56 220.7 167 59.9
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 9.2e-56 220.7 167 59.9
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 1.2e-55 220.3 167 59.9
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.2e-55 220.3 170 62.9
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.1e-55 219.5 167 60.5
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 3.5e-55 218.8 173 65.9
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.5e-55 218.8 147 72.1
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.6e-55 218.4 165 63.0
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 1.1e-53 213.8 163 65.0
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 1.5e-53 213.4 186 59.7
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 4.3e-53 211.8 243 47.7
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 7.3e-53 211.1 171 64.9
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.6e-52 209.9 168 60.7
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 2.6e-50 202.6 133 73.7
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 9.9e-50 200.7 169 59.2
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 1.7e-49 199.9 138 68.1
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 3.2e-48 195.7 136 71.3
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 9.2e-48 194.1 131 71.8
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 6.6e-46 188.0 131 68.7
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 3.4e-42 175.6 188 50.5
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.2e-40 168.7 186 51.6
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 4.2e-40 168.7 191 49.2
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.6e-39 166.8 118 69.5
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.3e-36 157.1 148 55.4
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.1e-35 152.5 164 50.0
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.9e-35 151.4 163 52.8
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 6.7e-30 134.8 182 43.4
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.1e-27 127.5 93 67.7
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 2.2e-25 119.8 118 52.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 1.1e-24 117.5 82 62.2
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.0e-22 110.9 70 71.4
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 7.4e-21 104.8 108 52.8
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 6.2e-20 101.7 160 41.9
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.4e-19 100.5 169 34.3
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 1.0e-17 94.4 139 38.1
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.5e-16 89.7 58 69.0
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 3.3e-13 79.3 60 58.3
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 6.5e-09 65.1 74 44.6
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.1e-08 64.3 40 75.0


User provided reference genes

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