Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc04_g00190 Coffea canephora HOM05D008782 ORTHO05D010834 8.2e-56 220.3 124 100.0
QL05p084042 Quercus lobata HOM05D008782 ORTHO05D010834 9.1e-15 84.0 97 53.6
Potri.008G005500 Populus trichocarpa HOM05D008782 ORTHO05D010834 4.5e-14 81.6 93 49.5
vmacro18746 Vaccinium macrocarpon HOM05D008782 ORTHO05D010834 7.7e-14 80.9 112 53.6
Eucgr.J03178 Eucalyptus grandis HOM05D008782 ORTHO05D010834 5.0e-13 78.2 94 50.0
Dinv20339 Davidia involucrata HOM05D008782 ORTHO05D010834 1.9e-12 76.3 88 58.0
RcHm_v2.0_Chr2g0149581 Rosa chinensis HOM05D008782 ORTHO05D010834 9.4e-12 73.9 96 53.1
CiPaw.01G090800 Carya illinoinensis HOM05D008782 ORTHO05D010834 1.6e-11 73.2 94 48.9
CANSAT01G2312 Cannabis sativa HOM05D008782 ORTHO05D010834 2.1e-11 72.8 109 46.8
FAN09G0669 Fragaria x ananassa HOM05D008782 ORTHO05D010834 2.1e-11 72.8 125 45.6
MD17G1163400 Malus domestica HOM05D008782 ORTHO05D010834 1.8e-10 69.7 88 48.9
FAN05G3315 Fragaria x ananassa HOM05D008782 ORTHO05D010834 5.2e-10 68.2 123 43.9
TWI75G0399 Tripterygium wilfordii HOM05D008782 ORTHO05D010834 5.2e-10 68.2 92 51.1
arahy.Tifrunner.gnm1.ann1.L8JHJZ Arachis hypogaea HOM05D008782 ORTHO05D010834 1.2e-09 67.0 92 43.5
FvH4_6g37030 Fragaria vesca HOM05D008782 ORTHO05D010834 1.2e-09 67.0 128 42.2
FAN14G2086 Fragaria x ananassa HOM05D008782 ORTHO05D010834 1.2e-09 67.0 128 42.2
GSVIVG01029541001 Vitis vinifera HOM05D008782 ORTHO05D010834 2.0e-09 66.2 70 54.3
Actinidia21883 Actinidia chinensis HOM05D008782 ORTHO05D010834 5.7e-09 64.7 124 37.9
Dinv37781 Davidia involucrata HOM05D008782 ORTHO05D010834 9.8e-09 63.9 80 51.2
arahy.Tifrunner.gnm1.ann1.4RY61R Arachis hypogaea HOM05D008782 ORTHO05D010834 2.8e-08 62.4 92 47.8
Gohir.A05G114500 Gossypium hirsutum HOM05D008782 ORTHO05D010834 2.8e-08 62.4 92 46.7
MD09G1164800 Malus domestica HOM05D008782 ORTHO05D010834 4.9e-08 61.6 67 52.2
Prupe.3G022200 Prunus persica HOM05D008782 ORTHO05D010834 1.8e-07 59.7 81 55.6
Manes.06G177200 Manihot esculenta HOM05D008782 ORTHO05D010834 9.2e-07 57.4 74 48.6
Phvul.005G185200 Phaseolus vulgaris HOM05D008782 ORTHO05D010834 9.2e-07 57.4 89 40.4
Glyma.01G180300 Glycine max HOM05D008782 ORTHO05D010834 2.0e-06 56.2 94 39.4
Actinidia38806 Actinidia chinensis HOM05D008782 ORTHO05D010834 3.5e-06 55.5 64 53.1
Cfa002152 Carpinus fangiana HOM05D008782 ORTHO05D010834 4.5e-06 55.1 70 48.6
Thecc.06G058700 Theobroma cacao HOM05D008782 ORTHO05D010834 5.9e-06 54.7 67 52.2


User provided reference genes

Program Settings