Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g15550 Coffea canephora HOM05D001981 ORTHO05D000470 4.4e-49 197.6 97 100.0
Cc03_g15570 Coffea canephora HOM05D001981 ORTHO05D000470 3.3e-44 181.4 96 91.7
Cc03_g15460 Coffea canephora HOM05D001981 ORTHO05D000470 2.6e-41 171.8 96 87.5
Cc03_g15540 Coffea canephora HOM05D001981 ORTHO05D000470 4.4e-41 171.0 96 86.5
Cc03_g15530 Coffea canephora HOM05D001981 ORTHO05D000470 7.1e-39 163.7 96 85.4
Prupe.6G180400 Prunus persica HOM05D001981 ORTHO05D000470 2.1e-14 82.4 97 47.4
Duzib264G0511 Durio zibethinus HOM05D001981 ORTHO05D000470 1.8e-13 79.3 96 47.9
Potri.007G088900 Populus trichocarpa HOM05D001981 ORTHO05D000470 3.0e-13 78.6 96 47.9
Duzib147G0088 Durio zibethinus HOM05D001981 ORTHO05D000470 6.7e-13 77.4 83 54.2
DCAR_032175 Daucus carota HOM05D001981 ORTHO05D000470 1.5e-12 76.3 96 43.8
PGR004G0938 Punica granatum HOM05D001981 ORTHO05D000470 1.5e-12 76.3 64 59.4
QL06p050261 Quercus lobata HOM05D001981 ORTHO05D000470 3.3e-12 75.1 97 45.4
MBI02_g30883_MAGBIO Magnolia biondii HOM05D001981 ORTHO05D000470 9.7e-12 73.6 60 61.7
PSO133G0042 Papaver somniferum HOM05D001981 ORTHO05D000470 1.3e-11 73.2 99 47.5
TAR381G1008 Trochodendron aralioides HOM05D001981 ORTHO05D000470 2.8e-11 72.0 97 48.5
DCAR_032174 Daucus carota HOM05D001981 ORTHO05D000470 8.2e-11 70.5 46 65.2
Potri.005G078801 Populus trichocarpa HOM05D001981 ORTHO05D000470 1.1e-10 70.1 96 42.7
Dinv21934 Davidia involucrata HOM05D001981 ORTHO05D000470 1.4e-10 69.7 61 57.4
Gorai.003G044800 Gossypium raimondii HOM05D001981 ORTHO05D000470 1.4e-10 69.7 89 42.7
Actinidia32975 Actinidia chinensis HOM05D001981 ORTHO05D000470 1.8e-10 69.3 73 50.7
COL.COLO4_09917 Corchorus olitorius HOM05D001981 ORTHO05D000470 2.4e-10 68.9 45 66.7
TAR381G0738 Trochodendron aralioides HOM05D001981 ORTHO05D000470 2.4e-10 68.9 61 54.1
MD00G1041000 Malus domestica HOM05D001981 ORTHO05D000470 3.1e-10 68.6 96 40.6
PGSC0003DMG400021836 Solanum tuberosum HOM05D001981 ORTHO05D000470 3.1e-10 68.6 53 67.9
Gohir.A02G132400 Gossypium hirsutum HOM05D001981 ORTHO05D000470 4.1e-10 68.2 90 40.0
TWI53G2070 Tripterygium wilfordii HOM05D001981 ORTHO05D000470 4.1e-10 68.2 55 60.0
Gohir.A11G053000 Gossypium hirsutum HOM05D001981 ORTHO05D000470 5.3e-10 67.8 97 42.3
Gohir.D03G043800 Gossypium hirsutum HOM05D001981 ORTHO05D000470 5.3e-10 67.8 86 41.9
Gohir.D11G056400 Gossypium hirsutum HOM05D001981 ORTHO05D000470 5.3e-10 67.8 97 42.3
Gorai.007G061600 Gossypium raimondii HOM05D001981 ORTHO05D000470 5.3e-10 67.8 97 42.3
Aqoxy6G00566 Aquilegia oxysepala HOM05D001981 ORTHO05D000470 1.5e-09 66.2 62 54.8
DCAR_011504 Daucus carota HOM05D001981 ORTHO05D000470 2.0e-09 65.9 45 62.2
Peaxi162Scf00183g00121 Petunia axillaris HOM05D001981 ORTHO05D000470 2.0e-09 65.9 54 61.1
ATR0564G429 Amborella trichopoda HOM05D001981 ORTHO05D000470 2.6e-09 65.5 76 38.2
CiPaw.03G139100 Carya illinoinensis HOM05D001981 ORTHO05D000470 2.6e-09 65.5 99 47.5
Aqoxy6G00565 Aquilegia oxysepala HOM05D001981 ORTHO05D000470 4.5e-09 64.7 92 43.5
CiPaw.06G152100 Carya illinoinensis HOM05D001981 ORTHO05D000470 4.5e-09 64.7 47 61.7
MBI05_g00782_MAGBIO Magnolia biondii HOM05D001981 ORTHO05D000470 4.5e-09 64.7 94 40.4
Peaxi162Scf00295g00043 Petunia axillaris HOM05D001981 ORTHO05D000470 4.5e-09 64.7 101 43.6
RcHm_v2.0_Chr2g0115291 Rosa chinensis HOM05D001981 ORTHO05D000470 4.5e-09 64.7 102 43.1
CAN.G1049.1 Capsicum annuum HOM05D001981 ORTHO05D000470 5.9e-09 64.3 54 61.1
Cfa002697 Carpinus fangiana HOM05D001981 ORTHO05D000470 5.9e-09 64.3 67 58.2
Nitab4.5_0000715g0170 Nicotiana tabacum HOM05D001981 ORTHO05D000470 5.9e-09 64.3 70 48.6
Aqoxy6G00563 Aquilegia oxysepala HOM05D001981 ORTHO05D000470 7.6e-09 63.9 65 50.8
QL11p019790 Quercus lobata HOM05D001981 ORTHO05D000470 7.6e-09 63.9 60 50.0
Haze_24972 Corylus avellana HOM05D001981 ORTHO05D000470 1.3e-08 63.2 70 55.7
PGSC0003DMG400045766 Solanum tuberosum HOM05D001981 ORTHO05D000470 1.7e-08 62.8 55 54.5
FAN28G0599 Fragaria x ananassa HOM05D001981 ORTHO05D000470 2.2e-08 62.4 53 58.5
Thecc.01G105800 Theobroma cacao HOM05D001981 ORTHO05D000470 2.2e-08 62.4 60 51.7
CiPaw.05G038200 Carya illinoinensis HOM05D001981 ORTHO05D000470 2.9e-08 62.0 45 64.4
Sabra05G0064900 Salix brachista HOM05D022985 ORTHO05D025812 2.9e-08 62.0 96 40.6
Nitab4.5_0005597g0040 Nicotiana tabacum HOM05D001981 ORTHO05D000470 3.8e-08 61.6 46 65.2
Zm00001eb311160 Zea mays HOM05D001981 ORTHO05D000470 3.8e-08 61.6 70 41.4
FvH4_1g21470 Fragaria vesca HOM05D001981 ORTHO05D000470 5.0e-08 61.2 53 56.6
FAN19G1159 Fragaria x ananassa HOM05D001981 ORTHO05D000470 5.0e-08 61.2 53 56.6
Manes.12G137900 Manihot esculenta HOM05D001981 ORTHO05D000470 5.0e-08 61.2 96 41.7
Migut.H02385 Erythranthe guttata HOM05D001981 ORTHO05D000470 6.5e-08 60.8 105 39.0
FAN26G2105 Fragaria x ananassa HOM05D001981 ORTHO05D000470 8.5e-08 60.5 53 56.6
CAN.G878.3 Capsicum annuum HOM05D001981 ORTHO05D000470 1.9e-07 59.3 57 56.1
CANSAT01G0984 Cannabis sativa HOM05D001981 ORTHO05D000470 2.5e-07 58.9 94 39.4
Aqoxy6G00571 Aquilegia oxysepala HOM05D001981 ORTHO05D000470 5.5e-07 57.8 64 48.4
PSO133G0085 Papaver somniferum HOM05D001981 ORTHO05D000470 9.3e-07 57.0 61 47.5
Psat7g098120 Pisum sativum HOM05D001981 ORTHO05D000470 9.3e-07 57.0 96 37.5
Eucgr.I02680 Eucalyptus grandis HOM05D001981 ORTHO05D000470 1.2e-06 56.6 50 54.0
PSO541G5336 Papaver somniferum HOM05D001981 ORTHO05D000470 1.2e-06 56.6 62 48.4
SEGI_08059 Sequoiadendron giganteum HOM05D001981 ORTHO05D000470 1.2e-06 56.6 65 43.1
TPR.G10434 Trifolium pratense HOM05D001981 ORTHO05D000470 1.2e-06 56.6 99 37.4
Lalb_Chr20g0123101 Lupinus albus HOM05D001981 ORTHO05D000470 1.6e-06 56.2 46 60.9
Medtr4g094275 Medicago truncatula HOM05D001981 ORTHO05D000470 1.6e-06 56.2 98 36.7
arahy.Tifrunner.gnm1.ann1.GBJ2WV Arachis hypogaea HOM05D001981 ORTHO05D000470 2.7e-06 55.5 64 48.4
Glyma.08G180100 Glycine max HOM05D001981 ORTHO05D000470 2.7e-06 55.5 61 47.5
Glyma.08G180300 Glycine max HOM05D001981 ORTHO05D000470 2.7e-06 55.5 61 47.5
SEGI_33632 Sequoiadendron giganteum HOM05D001981 ORTHO05D000470 3.6e-06 55.1 65 41.5
Pp3c10_15440 Physcomitrium patens HOM05D001981 ORTHO05D000470 4.6e-06 54.7 63 46.0
Glyma.08G074200 Glycine max HOM05D001981 ORTHO05D000470 6.1e-06 54.3 94 40.4
Migut.C00178 Erythranthe guttata HOM05D001981 ORTHO05D000470 7.9e-06 53.9 44 56.8
Lsat_1_v5_gn_8_35741 Lactuca sativa HOM05D001981 ORTHO05D000470 7.9e-06 53.9 62 46.8
SEGI_25163 Sequoiadendron giganteum HOM05D001981 ORTHO05D000470 7.9e-06 53.9 65 40.0
Zm00001eb311170 Zea mays HOM05D001981 ORTHO05D000470 7.9e-06 53.9 66 43.9


User provided reference genes

Program Settings