Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g14920 Coffea canephora HOM05D006509 ORTHO05D008144 6.1e-76 287.3 139 100.0
CAN.G157.10 Capsicum annuum HOM05D006509 ORTHO05D008144 3.0e-46 188.7 138 63.8
Nitab4.5_0002192g0100 Nicotiana tabacum HOM05D006509 ORTHO05D008144 3.0e-46 188.7 144 62.5
SalBow2G3295 Salvia bowleyana HOM05D006509 ORTHO05D008144 6.6e-46 187.6 134 65.7
PGSC0003DMG400019835 Solanum tuberosum HOM05D006509 ORTHO05D008144 8.6e-46 187.2 138 63.0
Nn1g04452 Nelumbo nucifera HOM05D006509 ORTHO05D008144 9.5e-45 183.7 135 65.2
Peaxi162Scf00818g00020 Petunia axillaris HOM05D006509 ORTHO05D008144 9.5e-45 183.7 138 61.6
TAR629G0624 Trochodendron aralioides HOM05D006509 ORTHO05D008144 2.8e-44 182.2 138 65.9
Sopen02g005330 Solanum pennellii HOM05D006509 ORTHO05D008144 3.6e-44 181.8 138 60.9
Dinv39609 Davidia involucrata HOM05D006509 ORTHO05D008144 6.2e-44 181.0 138 63.8
CiPaw.05G167100 Carya illinoinensis HOM05D006509 ORTHO05D008144 8.0e-44 180.6 138 65.2
Solyc02g021050.3 Solanum lycopersicum HOM05D006509 ORTHO05D008144 1.4e-43 179.9 138 60.1
Eucgr.G02566 Eucalyptus grandis HOM05D006509 ORTHO05D008144 3.1e-43 178.7 139 63.3
Atru.chr11.1320 Acer truncatum HOM05D006509 ORTHO05D008144 4.0e-43 178.3 138 63.0
Manes.09G055500 Manihot esculenta HOM05D006509 ORTHO05D008144 4.0e-43 178.3 136 62.5
PSO017G6086 Papaver somniferum HOM05D006509 ORTHO05D008144 4.0e-43 178.3 146 61.6
Atru.chr11.1232 Acer truncatum HOM05D006509 ORTHO05D008144 5.2e-43 177.9 138 63.0
Hund08535 Selenicereus undatus HOM05D006509 ORTHO05D008144 5.2e-43 177.9 142 62.0
Cfa008714 Carpinus fangiana HOM05D006509 ORTHO05D008144 6.8e-43 177.6 142 60.6
Sc06g0007860 Simmondsia chinensis HOM05D006509 ORTHO05D008144 6.8e-43 177.6 138 63.8
AUR62014968 Chenopodium quinoa HOM05D006509 ORTHO05D008144 8.9e-43 177.2 138 63.0
Haze_11724 Corylus avellana HOM05D006509 ORTHO05D008144 8.9e-43 177.2 142 59.9
Hma1.2p1_1005F.1_g246910 Hydrangea macrophylla HOM05D006509 ORTHO05D008144 2.0e-42 176.0 147 60.5
Gohir.D13G187200 Gossypium hirsutum HOM05D006509 ORTHO05D008144 4.4e-42 174.9 144 62.5
Gorai.010G244900 Gossypium raimondii HOM05D006509 ORTHO05D008144 4.4e-42 174.9 144 62.5
Ciclev10032158m.g Citrus clementina HOM05D006509 ORTHO05D008144 7.5e-42 174.1 136 60.3
Duzib264G0706 Durio zibethinus HOM05D006509 ORTHO05D008144 7.5e-42 174.1 139 63.3
TWI74G1084 Tripterygium wilfordii HOM05D006509 ORTHO05D008144 7.5e-42 174.1 136 62.5
A05p29310 Brassica napus HOM05D006509 ORTHO05D008144 9.8e-42 173.7 137 62.8
BcaC05g28409 Brassica carinata HOM05D006509 ORTHO05D008144 1.3e-41 173.3 137 62.8
C05p44930 Brassica napus HOM05D006509 ORTHO05D008144 1.3e-41 173.3 137 62.8
BolC5t33216H Brassica oleracea HOM05D006509 ORTHO05D008144 1.3e-41 173.3 137 62.8
arahy.Tifrunner.gnm1.ann1.6728UU Arachis hypogaea HOM05D006509 ORTHO05D008144 2.2e-41 172.6 137 60.6
arahy.Tifrunner.gnm1.ann1.LJ2JSE Arachis hypogaea HOM05D006509 ORTHO05D008144 2.2e-41 172.6 137 60.6
arahy.Tifrunner.gnm1.ann1.4V51TJ Arachis hypogaea HOM05D006509 ORTHO05D008144 2.9e-41 172.2 142 60.6
EL10Ac9g22921 Beta vulgaris HOM05D006509 ORTHO05D008144 2.9e-41 172.2 146 58.9
Gohir.A13G179100 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.9e-41 172.2 144 61.8
PSO478G1783 Papaver somniferum HOM05D006509 ORTHO05D008144 2.9e-41 172.2 146 59.6
arahy.Tifrunner.gnm1.ann1.IV5K9E Arachis hypogaea HOM05D006509 ORTHO05D008144 1.1e-40 170.2 139 60.4
MSTRG.22733 Avicennia marina HOM05D006509 ORTHO05D008144 1.1e-40 170.2 140 60.7
Sed0013319 Sechium edule HOM05D006509 ORTHO05D008144 1.1e-40 170.2 135 57.8
BraA05t21822Z Brassica rapa HOM05D006509 ORTHO05D008144 1.9e-40 169.5 137 62.0
ClCG09G005710 Citrullus lanatus HOM05D006509 ORTHO05D008144 3.2e-40 168.7 135 59.3
Thecc.01G136400 Theobroma cacao HOM05D006509 ORTHO05D008144 3.2e-40 168.7 137 62.0
Lsat_1_v5_gn_3_32880 Lactuca sativa HOM05D006509 ORTHO05D008144 4.1e-40 168.3 138 60.1
GSVIVG01010764001 Vitis vinifera HOM05D006509 ORTHO05D008144 4.1e-40 168.3 137 59.9
CSS0015169 Camellia sinensis var. sinensis HOM05D006509 ORTHO05D008144 7.0e-40 167.5 143 58.0
Phvul.002G240600 Phaseolus vulgaris HOM05D006509 ORTHO05D008144 7.0e-40 167.5 134 56.7
QL03p043626 Quercus lobata HOM05D006509 ORTHO05D008144 7.0e-40 167.5 136 63.2
CANSAT56G2102 Cannabis sativa HOM05D006509 ORTHO05D008144 9.2e-40 167.2 139 57.6
Carub.0003s1969 Capsella rubella HOM05D006509 ORTHO05D008144 2.0e-39 166.0 140 59.3
PGR004G1007 Punica granatum HOM05D006509 ORTHO05D008144 3.5e-39 165.2 139 54.7
RcHm_v2.0_Chr1g0363071 Rosa chinensis HOM05D006509 ORTHO05D008144 1.0e-38 163.7 138 58.7
FvH4_7g19250 Fragaria vesca HOM05D006509 ORTHO05D008144 2.3e-38 162.5 136 58.1
FAN06G0528 Fragaria x ananassa HOM05D006509 ORTHO05D008144 2.3e-38 162.5 136 58.1
Lj4g0012507 Lotus japonicus HOM05D006509 ORTHO05D008144 2.3e-38 162.5 133 58.6
THA.LOC104814131 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 2.3e-38 162.5 138 60.9
CDE07G1911 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.0e-38 162.2 136 59.6
CDE04G0697 Ceratophyllum demersum HOM05D006509 ORTHO05D008144 3.9e-38 161.8 136 59.6
THA.LOC104800032 Tarenaya hassleriana HOM05D006509 ORTHO05D008144 3.9e-38 161.8 138 60.9
VMungo0251G2215 Vigna mungo HOM05D006509 ORTHO05D008144 3.9e-38 161.8 131 56.5
AT3G19810 Arabidopsis thaliana HOM05D006509 ORTHO05D008144 5.0e-38 161.4 132 60.6
FAN01G2825 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.0e-38 161.4 136 58.1
FAN03G0898 Fragaria x ananassa HOM05D006509 ORTHO05D008144 5.0e-38 161.4 136 57.4
HanXRQChr06g0171951 Helianthus annuus HOM05D006509 ORTHO05D008144 5.0e-38 161.4 132 61.4
CsaV3_7G029430 Cucumis sativus L. HOM05D006509 ORTHO05D008144 6.6e-38 161.0 134 56.0
BcaB06g26050 Brassica carinata HOM05D006509 ORTHO05D008144 1.5e-37 159.8 140 58.6
Thhalv10021111m.g Eutrema salsugineum HOM05D006509 ORTHO05D008144 1.5e-37 159.8 142 57.0
Sp3g17820 Schrenkiella parvula HOM05D006509 ORTHO05D008144 1.9e-37 159.5 142 57.0
Ca_17903_v3 Cicer arietinum L. HOM05D006509 ORTHO05D008144 3.3e-37 158.7 134 56.0
Migut.I00780 Erythranthe guttata HOM05D006509 ORTHO05D008144 3.3e-37 158.7 135 55.6
SGA_v2.0_scaffold5G02679 Striga asiatica HOM05D006509 ORTHO05D008144 3.3e-37 158.7 137 56.9
CARHR095320 Cardamine hirsuta HOM05D006509 ORTHO05D008144 4.3e-37 158.3 143 58.0
Glyma.05G160301 Glycine max HOM05D006509 ORTHO05D008144 4.3e-37 158.3 134 54.5
Lalb_Chr13g0295231 Lupinus albus HOM05D006509 ORTHO05D008144 5.6e-37 157.9 134 57.5
Sabra10G0129900 Salix brachista HOM05D006509 ORTHO05D008144 5.6e-37 157.9 132 58.3
AL3G33260 Arabidopsis lyrata HOM05D006509 ORTHO05D008144 9.5e-37 157.1 142 58.5
Migut.I00779 Erythranthe guttata HOM05D006509 ORTHO05D008144 9.5e-37 157.1 135 55.6
Medtr8g086630 Medicago truncatula HOM05D006509 ORTHO05D008144 9.5e-37 157.1 134 56.0
Prupe.2G212300 Prunus persica HOM05D006509 ORTHO05D008144 1.6e-36 156.4 139 58.3
Gohir.A09G005300 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.8e-36 155.6 134 58.2
MD01G1107600 Malus domestica HOM05D006509 ORTHO05D008144 3.6e-36 155.2 143 55.2
Aqoxy4G00161 Aquilegia oxysepala HOM05D006509 ORTHO05D008144 4.7e-36 154.8 138 55.8
Aa31LG8G6580 Aethionema arabicum HOM05D006509 ORTHO05D008144 6.2e-36 154.5 137 55.5
vmacro14294 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.2e-36 154.5 138 55.1
vmacro23064 Vaccinium macrocarpon HOM05D006509 ORTHO05D008144 6.2e-36 154.5 138 55.1
DCAR_030403 Daucus carota HOM05D006509 ORTHO05D008144 8.1e-36 154.1 134 56.0
Potri.010G170100 Populus trichocarpa HOM05D006509 ORTHO05D008144 1.4e-35 153.3 132 55.3
Rhsim01G0196900 Rhododendron simsii HOM05D006509 ORTHO05D008144 1.4e-35 153.3 141 56.0
Gohir.D09G004600 Gossypium hirsutum HOM05D006509 ORTHO05D008144 2.3e-35 152.5 134 56.7
unitig_747.g21717 Utricularia gibba HOM05D006509 ORTHO05D008144 2.3e-35 152.5 131 55.0
Glyma.08G117902 Glycine max HOM05D006509 ORTHO05D008144 3.1e-35 152.1 129 55.8
Gorai.006G006200 Gossypium raimondii HOM05D006509 ORTHO05D008144 5.2e-35 151.4 134 56.0
TPR.G6737 Trifolium pratense HOM05D006509 ORTHO05D008144 8.9e-35 150.6 141 51.8
AUR62017665 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.0e-34 149.4 140 57.1
Actinidia04136 Actinidia chinensis HOM05D006509 ORTHO05D008144 1.1e-32 143.7 143 51.0
FAN10G2131 Fragaria x ananassa HOM05D006509 ORTHO05D008144 1.9e-32 142.9 116 60.3
Lj6C721T21 Lonicera japonica HOM05D006509 ORTHO05D008144 2.4e-32 142.5 120 59.2
FAN10G3587 Fragaria x ananassa HOM05D006509 ORTHO05D007808 5.4e-32 141.4 116 59.5
MBI06_g12322_MAGBIO Magnolia biondii HOM05D006509 ORTHO05D008144 2.7e-31 139.0 125 56.0
Os02g0831200 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.0e-30 137.1 139 50.4
AUR62014967 Chenopodium quinoa HOM05D003778 ORTHO05D004418 3.0e-30 135.6 110 62.7
ATR0618G169 Amborella trichopoda HOM05D006509 ORTHO05D008144 5.1e-30 134.8 143 49.7
Oeu049185.1 Olea europaea HOM05D006509 ORTHO05D008144 9.5e-29 130.6 110 58.2
Os04g0108300 Oryza sativa ssp. japonica HOM05D006509 ORTHO05D008144 1.6e-28 129.8 122 51.6
SEGI_30002 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 1.8e-27 126.3 134 52.2
SEGI_16170 Sequoiadendron giganteum HOM05D006509 ORTHO05D008144 3.1e-27 125.6 134 53.7
Psat7g069200 Pisum sativum HOM05D006509 ORTHO05D008144 6.8e-27 124.4 135 46.7
COL.COLO4_35800 Corchorus olitorius HOM05D006509 ORTHO05D008144 8.4e-25 117.5 95 65.3
Zm00001eb259480 Zea mays HOM05D006509 ORTHO05D008144 8.4e-25 117.5 120 51.7
MELO3C015985.2 Cucumis melo HOM05D006509 ORTHO05D008144 1.6e-23 113.2 97 56.7
CBR_g57847 Chara braunii HOM05D006509 ORTHO05D008144 2.1e-23 112.8 150 42.0
Pp3c4_29820 Physcomitrium patens HOM05D006509 ORTHO05D008144 1.1e-21 107.1 150 36.7
Mapoly0002s0264 Marchantia polymorpha HOM05D006509 ORTHO05D008144 2.5e-21 105.9 135 40.0
Medtr4g086490 Medicago truncatula HOM05D000001 ORTHO05D000003 4.3e-21 105.1 95 56.8
AUR62015202 Chenopodium quinoa HOM05D006509 ORTHO05D008144 2.4e-19 99.4 92 56.5
Ca_19971_v3 Cicer arietinum L. HOM05D000020 ORTHO05D000156 8.1e-12 74.3 73 54.8
Oeu033605.1 Olea europaea HOM05D006509 ORTHO05D008144 2.9e-09 65.9 77 46.8
AagrBONN_evm.TU.Sc2ySwM_362.2130 Anthoceros agrestis HOM05D006509 ORTHO05D008144 3.0e-06 55.8 139 30.2


User provided reference genes

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