Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g12210 Coffea canephora HOM05D000361 ORTHO05D004243 1.2e-74 283.1 141 100.0
Cc02_g26000 Coffea canephora HOM05D000361 ORTHO05D004243 4.0e-67 258.1 134 96.3
Cc04_g08620 Coffea canephora HOM05D000361 ORTHO05D004243 4.0e-67 258.1 134 96.3
Cc02_g33820 Coffea canephora HOM05D000361 ORTHO05D004243 1.1e-64 250.0 152 84.9
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 8.1e-60 233.8 125 92.8
Cc00_g34370 Coffea canephora HOM05D000361 ORTHO05D004243 2.8e-52 208.8 114 92.1
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 5.8e-50 201.1 130 73.1
Cc05_g04720 Coffea canephora HOM05D000361 ORTHO05D004243 1.3e-49 199.9 111 91.9
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.4e-48 195.7 130 73.1
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 7.1e-48 194.1 130 71.5
Cc11_g04100 Coffea canephora HOM05D000361 ORTHO05D004243 1.2e-47 193.4 111 90.1
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 2.1e-47 192.6 126 74.6
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 7.9e-47 190.7 130 70.0
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 1.0e-46 190.3 138 66.7
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 1.5e-45 186.4 130 66.2
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 1.9e-45 186.0 126 72.2
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 1.9e-45 186.0 126 69.8
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 2.5e-45 185.7 126 71.4
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.3e-45 184.9 138 68.1
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 4.3e-45 184.9 132 70.5
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 7.4e-45 184.1 126 69.8
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.6e-45 183.7 126 71.4
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 1.3e-44 183.3 130 67.7
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 2.8e-44 182.2 126 69.0
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 6.2e-44 181.0 126 71.4
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 8.1e-44 180.6 133 69.2
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 8.1e-44 180.6 133 69.2
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.8e-43 179.5 133 68.4
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 1.8e-43 179.5 126 65.9
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 2.4e-43 179.1 126 69.0
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 9.0e-43 177.2 126 67.5
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 9.0e-43 177.2 124 67.7
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 7.6e-42 174.1 121 66.9
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 1.0e-41 173.7 126 65.9
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.3e-41 173.3 126 67.5
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.3e-41 173.3 126 67.5
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 1.3e-41 173.3 126 66.7
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 1.7e-41 172.9 126 65.9
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.7e-41 172.9 126 66.7
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 2.2e-41 172.6 134 62.7
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 2.2e-41 172.6 114 71.1
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.2e-41 172.6 143 60.1
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 2.9e-41 172.2 125 65.6
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 3.8e-41 171.8 125 66.4
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 4.9e-41 171.4 134 64.2
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 4.9e-41 171.4 134 64.2
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 4.9e-41 171.4 135 61.5
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 8.4e-41 170.6 121 69.4
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 8.4e-41 170.6 125 66.4
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 8.4e-41 170.6 143 59.4
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 1.4e-40 169.9 121 67.8
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.9e-40 169.5 126 67.5
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 1.9e-40 169.5 129 64.3
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 2.5e-40 169.1 126 64.3
Gohir.D11G114600 Gossypium hirsutum HOM05D000361 ORTHO05D004243 4.2e-40 168.3 143 59.4
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 4.2e-40 168.3 126 65.9
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 5.5e-40 167.9 121 66.9
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 7.1e-40 167.5 143 57.3
Cc00_g34360 Coffea canephora HOM05D000361 ORTHO05D004243 7.1e-40 167.5 84 98.8
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 9.3e-40 167.2 143 60.1
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 9.3e-40 167.2 126 61.9
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.2e-39 166.8 126 61.9
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 6.0e-39 164.5 126 62.7
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 6.0e-39 164.5 126 61.9
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 7.9e-39 164.1 126 65.1
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 7.9e-39 164.1 126 62.7
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 1.8e-38 162.9 126 61.1
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 3.9e-38 161.8 126 60.3
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 5.1e-38 161.4 133 58.6
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 8.7e-38 160.6 131 60.3
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 8.7e-38 160.6 126 61.9
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 1.1e-37 160.2 132 60.6
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 1.5e-37 159.8 126 60.3
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 3.3e-37 158.7 133 56.4
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 3.3e-37 158.7 126 58.7
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 4.3e-37 158.3 109 67.9
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 4.3e-37 158.3 133 55.6
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 4.3e-37 158.3 111 67.6
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 4.3e-37 158.3 137 56.2
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 5.7e-37 157.9 133 58.6
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 5.7e-37 157.9 126 58.7
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 7.4e-37 157.5 133 57.9
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 9.6e-37 157.1 133 57.9
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 1.3e-36 156.8 121 62.8
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 2.8e-36 155.6 125 60.8
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 6.3e-36 154.5 114 61.4
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 1.1e-35 153.7 126 60.3
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 1.8e-35 152.9 135 53.3
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 2.4e-35 152.5 125 60.8
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 3.1e-35 152.1 142 52.8
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 3.1e-35 152.1 123 57.7
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 4.1e-35 151.8 141 58.2
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 4.1e-35 151.8 126 59.5
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 5.3e-35 151.4 133 56.4
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 6.9e-35 151.0 135 59.3
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.0e-34 149.4 134 57.5
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 4.5e-34 148.3 126 59.5
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.0e-33 147.1 127 58.3
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.0e-33 147.1 127 58.3
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 1.3e-33 146.7 126 56.3
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.3e-33 146.7 127 59.1
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.8e-33 145.2 165 48.5
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 6.5e-33 144.4 126 57.1
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 1.4e-32 143.3 144 55.6
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 2.5e-32 142.5 126 58.7
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 3.2e-32 142.1 122 58.2
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.6e-31 139.8 126 57.1
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.6e-31 138.7 132 55.3
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 3.6e-31 138.7 132 55.3
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 6.1e-31 137.9 126 56.3
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 1.3e-30 136.7 126 53.2
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 1.3e-30 136.7 127 56.7
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 1.8e-30 136.3 132 56.8
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 5.1e-30 134.8 126 52.4
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 5.1e-30 134.8 126 52.4
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 6.7e-30 134.4 139 50.4
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 6.7e-30 134.4 123 55.3
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 2.5e-29 132.5 126 54.8
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 2.5e-29 132.5 120 54.2
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 3.3e-29 132.1 126 52.4
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.6e-28 129.8 121 55.4
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 2.2e-28 129.4 109 57.8
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 3.7e-28 128.6 104 57.7
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 3.7e-28 128.6 108 60.2
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 8.2e-28 127.5 109 56.9
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 2.0e-26 122.9 104 52.9
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 1.0e-25 120.6 112 58.0
COL.COLO4_26725 Corchorus olitorius HOM05D000361 ORTHO05D004243 3.8e-25 118.6 80 63.8
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.4e-24 116.7 127 48.0
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 5.5e-24 114.8 91 58.2
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 9.4e-24 114.0 80 66.2
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 1.2e-23 113.6 109 45.9
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 1.2e-23 113.6 81 65.4
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 7.9e-23 110.9 104 53.8
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 3.0e-22 109.0 125 46.4
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 3.0e-22 109.0 125 46.4
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 1.1e-21 107.1 102 50.0
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 7.4e-21 104.4 138 47.1
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 9.7e-21 104.0 109 44.0
unitig_736.g22938 Utricularia gibba HOM05D000361 ORTHO05D004243 1.4e-19 100.1 110 49.1
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.1e-16 90.5 101 51.5
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.1e-16 90.5 101 51.5
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 1.4e-16 90.1 83 53.0
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 1.6e-15 86.7 76 60.5
Zm00001eb056500 Zea mays HOM05D000361 ORTHO05D004243 6.7e-14 81.3 126 37.3
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 4.8e-12 75.1 51 66.7
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 5.3e-11 71.6 55 63.6
Dinv10096 Davidia involucrata HOM05D000361 ORTHO05D004243 1.6e-10 70.1 36 86.1
BcaC04g24029 Brassica carinata HOM05D000361 ORTHO05D004243 3.5e-10 68.9 38 78.9
DCAR_005760 Daucus carota HOM05D000361 ORTHO05D004243 3.5e-10 68.9 39 74.4
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 3.8e-09 65.5 154 31.8
CDE05G1119 Ceratophyllum demersum HOM05D001444 ORTHO05D003766 1.9e-08 63.2 84 46.4
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 6.1e-07 58.2 119 30.3


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