Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g11430 Coffea canephora HOM05D004076 ORTHO05D004606 3.0e-297 1024.6 606 100.0
Dinv44195 Davidia involucrata HOM05D004076 ORTHO05D004606 3.8e-29 134.0 332 34.0
Hma1.2p1_0639F.1_g194000 Hydrangea macrophylla HOM05D004076 ORTHO05D004606 1.6e-27 128.6 280 33.9
Lj6A56G23 Lonicera japonica HOM05D004076 ORTHO05D004606 2.4e-20 104.8 134 43.3
MELO3C011646.2 Cucumis melo HOM05D004076 ORTHO05D004606 2.1e-19 101.7 136 40.4
GSVIVG01010749001 Vitis vinifera HOM05D004076 ORTHO05D004606 2.7e-19 101.3 248 30.6
ClCG08G004480 Citrullus lanatus HOM05D004076 ORTHO05D004606 6.0e-19 100.1 138 37.0
Atru.chr3.1528 Acer truncatum HOM05D004076 ORTHO05D004606 6.7e-18 96.7 205 32.7
Actinidia39854 Actinidia chinensis HOM05D004076 ORTHO05D004606 1.1e-17 95.9 281 30.6
TWI63G0993 Tripterygium wilfordii HOM05D004076 ORTHO05D004606 1.1e-17 95.9 126 42.1
Nitab4.5_0000313g0050 Nicotiana tabacum HOM05D004076 ORTHO05D004606 1.5e-17 95.5 318 28.3
Nitab4.5_0002475g0040 Nicotiana tabacum HOM05D004076 ORTHO05D004606 1.6e-16 92.0 283 27.6
Peaxi162Scf00297g01124 Petunia axillaris HOM05D004076 ORTHO05D004606 2.1e-16 91.7 224 33.0
Cfa015154 Carpinus fangiana HOM05D004076 ORTHO05D004606 3.1e-15 87.8 127 37.0
Sed0018268 Sechium edule HOM05D004076 ORTHO05D004606 9.0e-15 86.3 284 26.4
Haze_01516 Corylus avellana HOM05D004076 ORTHO05D004606 1.2e-14 85.9 207 30.9
Rhsim02G0076700 Rhododendron simsii HOM05D004076 ORTHO05D004606 5.8e-14 83.6 309 26.9
Lj3A198G30 Lonicera japonica HOM05D004076 ORTHO05D004606 3.8e-13 80.9 139 36.0
Prupe.1G191700 Prunus persica HOM05D004076 ORTHO05D004606 6.4e-13 80.1 127 36.2
Manes.04G041450 Manihot esculenta HOM05D004076 ORTHO05D004606 3.2e-12 77.8 235 27.2
TAR633G1822 Trochodendron aralioides HOM05D004076 ORTHO05D004606 3.2e-12 77.8 217 30.9
AUR62002294 Chenopodium quinoa HOM05D004076 ORTHO05D004606 4.2e-12 77.4 128 35.9
Eucgr.H00375 Eucalyptus grandis HOM05D004076 ORTHO05D004606 7.1e-12 76.6 128 36.7
CDE08G1584 Ceratophyllum demersum HOM05D004076 ORTHO05D004606 9.3e-12 76.3 130 31.5
AUR62015396 Chenopodium quinoa HOM05D004076 ORTHO05D004606 1.6e-11 75.5 129 34.9
EL10Ac3g05923 Beta vulgaris HOM05D004076 ORTHO05D004606 2.7e-11 74.7 88 39.8
Gohir.D09G203266 Gossypium hirsutum HOM05D004076 ORTHO05D004606 2.7e-11 74.7 87 43.7
Gorai.006G227200 Gossypium raimondii HOM05D004076 ORTHO05D004606 2.7e-11 74.7 87 43.7
Lalb_Chr14g0372441 Lupinus albus HOM05D004076 ORTHO05D004606 2.7e-11 74.7 113 36.3
Thecc.04G186100 Theobroma cacao HOM05D004076 ORTHO05D004606 3.5e-11 74.3 147 32.0
Actinidia11304 Actinidia chinensis HOM05D004076 ORTHO05D004606 6.0e-11 73.6 103 42.7
Nitab4.5_0005003g0040 Nicotiana tabacum HOM05D004076 ORTHO05D004606 1.0e-10 72.8 107 38.3
MD04G1007700 Malus domestica HOM05D004076 ORTHO05D004606 1.3e-10 72.4 314 26.1
Sabra17G0020100 Salix brachista HOM05D004076 ORTHO05D004606 3.9e-10 70.9 127 32.3
Aqoxy7G03601 Aquilegia oxysepala HOM05D004076 ORTHO05D004606 5.1e-10 70.5 126 35.7
Gohir.A09G209900 Gossypium hirsutum HOM05D004076 ORTHO05D004606 6.7e-10 70.1 205 30.7
Nitab4.5_0009641g0050 Nicotiana tabacum HOM05D004076 ORTHO05D004606 6.7e-10 70.1 139 30.9
QL10p048538 Quercus lobata HOM05D004076 ORTHO05D004606 6.7e-10 70.1 91 38.5
Phvul.011G055000 Phaseolus vulgaris HOM05D004076 ORTHO05D004606 1.1e-09 69.3 99 37.4
Duzib212G0448 Durio zibethinus HOM05D004076 ORTHO05D004606 3.3e-09 67.8 93 39.8
Glyma.11G128400 Glycine max HOM05D004076 ORTHO05D004606 7.4e-09 66.6 104 35.6
Glyma.15G030500 Glycine max HOM05D004076 ORTHO05D004606 9.6e-09 66.2 107 34.6
Lj3g0000298 Lotus japonicus HOM05D004076 ORTHO05D004606 1.3e-08 65.9 92 41.3
ATR0686G221 Amborella trichopoda HOM05D004076 ORTHO05D004606 1.6e-08 65.5 101 37.6
Ca_01262_v3 Cicer arietinum L. HOM05D004076 ORTHO05D004606 2.1e-08 65.1 115 33.9
Lalb_Chr01g0003201 Lupinus albus HOM05D004076 ORTHO05D004606 2.8e-08 64.7 166 28.3
Lj3g0002927 Lotus japonicus HOM05D004076 ORTHO05D004606 3.7e-08 64.3 106 35.8
Glyma.12G052967 Glycine max HOM05D004076 ORTHO05D004606 4.8e-08 63.9 128 32.8
COL.COLO4_20907 Corchorus olitorius HOM05D004076 ORTHO05D004606 6.2e-08 63.5 129 33.3
Psat1g007120 Pisum sativum HOM05D004076 ORTHO05D004606 6.2e-08 63.5 315 25.1
Sopen03g040670 Solanum pennellii HOM05D004076 ORTHO05D004606 8.2e-08 63.2 113 36.3
MBI08_g23495_MAGBIO Magnolia biondii HOM05D004076 ORTHO05D003073 1.1e-07 62.8 72 43.1
Sabra07G0104100 Salix brachista HOM05D004076 ORTHO05D004606 1.1e-07 62.8 84 35.7
Sopen07g034480 Solanum pennellii HOM05D004076 ORTHO05D004606 1.4e-07 62.4 239 24.3
ECA240G0221 Erigeron canadensis HOM05D004076 ORTHO05D004606 1.8e-07 62.0 207 27.5
VMungo1127G1790 Vigna mungo HOM05D004076 ORTHO05D004606 2.4e-07 61.6 99 36.4
HanXRQChr03g0090111 Helianthus annuus HOM05D004076 ORTHO05D004606 4.0e-07 60.8 308 24.7
Potri.007G127800 Populus trichocarpa HOM05D004076 ORTHO05D004606 4.0e-07 60.8 98 31.6
RcHm_v2.0_Chr4g0407011 Rosa chinensis HOM05D004076 ORTHO05D004606 4.0e-07 60.8 225 22.7
arahy.Tifrunner.gnm1.ann1.ZR8I8Y Arachis hypogaea HOM05D004076 ORTHO05D004606 5.3e-07 60.5 176 29.5
PGR031G3172 Punica granatum HOM05D004076 ORTHO05D004606 5.3e-07 60.5 86 40.7
Nn1g09697 Nelumbo nucifera HOM05D004076 ORTHO05D004606 6.9e-07 60.1 290 25.2
FvH4_4g10700 Fragaria vesca HOM05D004076 ORTHO05D004606 1.5e-06 58.9 206 24.3
Solyc03g121850.3 Solanum lycopersicum HOM05D004076 ORTHO05D004606 1.5e-06 58.9 116 35.3
Aqoxy7G02132 Aquilegia oxysepala HOM05D004076 ORTHO05D004606 2.0e-06 58.5 307 26.1
FAN07G2191 Fragaria x ananassa HOM05D004076 ORTHO05D004606 2.0e-06 58.5 177 25.4
FAN17G1176 Fragaria x ananassa HOM05D004076 ORTHO05D004606 2.0e-06 58.5 87 29.9
TPR.G35423 Trifolium pratense HOM05D004076 ORTHO05D004606 2.0e-06 58.5 113 32.7
CsaV3_6G003850 Cucumis sativus L. HOM05D004076 ORTHO05D004606 4.5e-06 57.4 59 47.5
THA.LOC104826195 Tarenaya hassleriana HOM05D004076 ORTHO05D004606 4.5e-06 57.4 68 44.1
Aa31LG1G8350 Aethionema arabicum HOM05D004076 ORTHO05D004606 7.6e-06 56.6 80 40.0
CANSAT78G1401 Cannabis sativa HOM05D004076 ORTHO05D004606 7.6e-06 56.6 159 25.8
Oeu032957.2 Olea europaea HOM05D004076 ORTHO05D004606 7.6e-06 56.6 279 26.2


User provided reference genes

Program Settings