Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g10460 Coffea canephora HOM05D006222 ORTHO05D007677 3.0e-160 568.5 302 100.0
Oeu034479.1 Olea europaea HOM05D006222 ORTHO05D007677 3.4e-87 325.9 308 62.3
CSS0005997 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 7.0e-85 318.2 204 77.0
CSS0002349 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.2e-84 317.4 204 77.0
SalBow3G0382 Salvia bowleyana HOM05D006222 ORTHO05D007677 2.7e-84 316.2 212 75.0
SGA_v2.0_scaffold31G12583 Striga asiatica HOM05D006222 ORTHO05D007677 1.3e-83 313.9 251 66.5
Cfa008558 Carpinus fangiana HOM05D006222 ORTHO05D007677 1.6e-81 307.0 292 58.6
CiPaw.02G058300 Carya illinoinensis HOM05D006222 ORTHO05D007677 1.6e-81 307.0 293 59.0
DCAR_027540 Daucus carota HOM05D006222 ORTHO05D007677 1.0e-80 304.3 268 62.3
Rhsim09G0036800 Rhododendron simsii HOM05D006222 ORTHO05D007677 1.0e-80 304.3 265 63.0
PGSC0003DMG400013073 Solanum tuberosum HOM05D006222 ORTHO05D007677 2.0e-79 300.1 208 74.0
GSVIVG01031673001 Vitis vinifera HOM05D006222 ORTHO05D007677 2.9e-78 296.2 209 69.4
Sopen05g032350 Solanum pennellii HOM05D006222 ORTHO05D007677 4.9e-78 295.4 208 72.6
Atru.chr3.1674 Acer truncatum HOM05D006222 ORTHO05D007677 6.4e-78 295.0 208 71.2
Ciclev10021532m.g Citrus clementina HOM05D006222 ORTHO05D007677 8.3e-78 294.7 203 73.9
Lj3P863T15 Lonicera japonica HOM05D006222 ORTHO05D007677 1.1e-77 294.3 219 68.0
HanXRQChr14g0432081 Helianthus annuus HOM05D006222 ORTHO05D007677 9.2e-77 291.2 205 70.7
Manes.11G113101 Manihot esculenta HOM05D006222 ORTHO05D007677 1.6e-76 290.4 203 68.5
Duzib268G0300 Durio zibethinus HOM05D006222 ORTHO05D007677 3.5e-76 289.3 202 68.8
Sabra14G0113700 Salix brachista HOM05D006222 ORTHO05D007677 1.0e-75 287.7 282 57.4
THA.LOC104804896 Tarenaya hassleriana HOM05D006222 ORTHO05D007677 1.0e-75 287.7 206 67.5
BraA05t19346Z Brassica rapa HOM05D006222 ORTHO05D007677 1.3e-75 287.3 223 63.7
Migut.N00436 Erythranthe guttata HOM05D006222 ORTHO05D007677 1.3e-75 287.3 243 62.1
COL.COLO4_07298 Corchorus olitorius HOM05D006222 ORTHO05D007677 1.7e-75 287.0 202 68.8
C04p04200 Brassica napus HOM05D006222 ORTHO05D007677 2.9e-75 286.2 224 62.9
BolC4t22057H Brassica oleracea HOM05D006222 ORTHO05D007677 2.9e-75 286.2 224 62.9
Thhalv10017033m.g Eutrema salsugineum HOM05D006222 ORTHO05D007677 3.9e-75 285.8 217 65.4
BcaC02g12413 Brassica carinata HOM05D006222 ORTHO05D007677 5.0e-75 285.4 250 59.2
MSTRG.24605 Avicennia marina HOM05D006222 ORTHO05D007677 1.5e-74 283.9 282 58.9
EL10Ac5g11641 Beta vulgaris HOM05D006222 ORTHO05D007677 1.9e-74 283.5 254 59.1
CANSAT78G1479 Cannabis sativa HOM05D006222 ORTHO05D007677 1.9e-74 283.5 287 56.1
TWI63G0082 Tripterygium wilfordii HOM05D006222 ORTHO05D007677 2.5e-74 283.1 274 59.5
AL4G41770 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 4.3e-74 282.3 218 67.4
AL401U10010 Arabidopsis lyrata HOM05D006222 ORTHO05D007677 7.3e-74 281.6 218 67.4
Dinv22662 Davidia involucrata HOM05D006222 ORTHO05D007677 2.1e-73 280.0 179 82.1
Sp4g25240 Schrenkiella parvula HOM05D006222 ORTHO05D007677 2.8e-73 279.6 270 56.7
A05p03600 Brassica napus HOM05D006222 ORTHO05D007677 6.2e-73 278.5 266 55.6
Eucgr.A00219 Eucalyptus grandis HOM05D006222 ORTHO05D007677 6.2e-73 278.5 256 59.0
Prupe.1G180600 Prunus persica HOM05D006222 ORTHO05D007677 6.2e-73 278.5 291 57.4
Aqoxy5G00038 Aquilegia oxysepala HOM05D006222 ORTHO05D007677 1.0e-72 277.7 202 68.8
TAR362G1090 Trochodendron aralioides HOM05D006222 ORTHO05D007677 1.8e-72 276.9 282 55.7
Carub.0004s2559 Capsella rubella HOM05D006222 ORTHO05D007677 2.3e-72 276.6 284 57.4
Hund13303 Selenicereus undatus HOM05D006222 ORTHO05D007677 4.0e-72 275.8 278 55.4
AT2G43110 Arabidopsis thaliana HOM05D006222 ORTHO05D007677 6.8e-72 275.0 215 64.7
PSO357G0657 Papaver somniferum HOM05D006222 ORTHO05D007677 8.9e-72 274.6 272 57.4
Gohir.A10G136100 Gossypium hirsutum HOM05D006222 ORTHO05D007677 1.2e-71 274.2 273 59.0
Hma1.2p1_1477F.1_g285900 Hydrangea macrophylla HOM05D006222 ORTHO05D007677 2.6e-71 273.1 175 75.4
Thecc.04G181000 Theobroma cacao HOM05D006222 ORTHO05D007677 2.6e-71 273.1 293 54.6
ECA232G0640 Erigeron canadensis HOM05D006222 ORTHO05D007677 4.4e-71 272.3 287 55.1
FvH4_4g11840 Fragaria vesca HOM05D006222 ORTHO05D007677 9.8e-71 271.2 248 57.3
Gorai.011G144300 Gossypium raimondii HOM05D006222 ORTHO05D007677 9.8e-71 271.2 273 58.2
Sc07g0007090 Simmondsia chinensis HOM05D006222 ORTHO05D007677 9.8e-71 271.2 274 54.7
Duzib212G0460 Durio zibethinus HOM05D006222 ORTHO05D007677 1.7e-70 270.4 202 66.8
PSO170G0570 Papaver somniferum HOM05D006222 ORTHO05D007677 1.7e-70 270.4 272 57.4
CARHR138180 Cardamine hirsuta HOM05D006222 ORTHO05D007677 4.9e-70 268.9 278 54.3
Actinidia32943 Actinidia chinensis HOM05D006222 ORTHO05D007677 6.4e-70 268.5 187 70.1
Gohir.D10G130500 Gossypium hirsutum HOM05D006222 ORTHO05D007677 8.3e-70 268.1 273 57.9
Nn3g20171 Nelumbo nucifera HOM05D006222 ORTHO05D007677 8.3e-70 268.1 203 68.0
RcHm_v2.0_Chr4g0409281 Rosa chinensis HOM05D006222 ORTHO05D007677 8.3e-70 268.1 276 55.4
Lalb_Chr06g0164621 Lupinus albus HOM05D006222 ORTHO05D007677 1.4e-69 267.3 249 58.6
CDE05G2371 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.9e-69 266.9 279 55.2
Aa31LG1G24920 Aethionema arabicum HOM05D006222 ORTHO05D007677 2.4e-69 266.5 300 50.0
FAN12G2296 Fragaria x ananassa HOM05D006222 ORTHO05D007677 2.4e-69 266.5 248 56.9
Sed0019288 Sechium edule HOM05D006222 ORTHO05D007677 2.4e-69 266.5 215 61.4
ClCG07G016700 Citrullus lanatus HOM05D006222 ORTHO05D007677 4.1e-69 265.8 213 62.0
PGR083G0744 Punica granatum HOM05D006222 ORTHO05D007677 4.1e-69 265.8 297 51.9
FAN17G0755 Fragaria x ananassa HOM05D006222 ORTHO05D007677 5.4e-69 265.4 240 59.2
BcaNung03540 Brassica carinata HOM05D006222 ORTHO05D007677 9.2e-69 264.6 289 52.9
CsaV3_4G003830 Cucumis sativus L. HOM05D006222 ORTHO05D007677 9.2e-69 264.6 252 54.0
FAN12G2611 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.6e-68 263.8 262 54.6
MD04G1034000 Malus domestica HOM05D006222 ORTHO05D007677 1.6e-68 263.8 290 53.1
CDE05G0624 Ceratophyllum demersum HOM05D006222 ORTHO05D007677 1.0e-67 261.2 296 51.4
CAN.G1310.8 Capsicum annuum HOM05D006222 ORTHO05D007677 5.0e-67 258.8 172 75.6
Ca_11418_v3 Cicer arietinum L. HOM05D006222 ORTHO05D007677 1.9e-66 256.9 204 62.7
vmacro22720 Vaccinium macrocarpon HOM05D006222 ORTHO05D007677 1.9e-66 256.9 185 73.5
Ah.12g062130 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.3e-66 256.1 267 53.2
MELO3C017672.2 Cucumis melo HOM05D006222 ORTHO05D007677 1.2e-65 254.2 234 55.6
PGSC0003DMG400023306 Solanum tuberosum HOM05D006222 ORTHO05D007677 1.2e-65 254.2 171 75.4
Peaxi162Scf00423g00727 Petunia axillaris HOM05D006222 ORTHO05D007677 1.6e-65 253.8 174 72.4
arahy.Tifrunner.gnm1.ann1.S0FJR3 Arachis hypogaea HOM05D006222 ORTHO05D007677 2.8e-65 253.1 212 58.5
arahy.Tifrunner.gnm1.ann1.VRQF1E Arachis hypogaea HOM05D006222 ORTHO05D007677 2.8e-65 253.1 210 59.0
Medtr1g116820 Medicago truncatula HOM05D006222 ORTHO05D007677 3.6e-65 252.7 209 59.8
Potri.014G150100 Populus trichocarpa HOM05D006222 ORTHO05D007677 3.1e-64 249.6 175 71.4
TPR.G8895 Trifolium pratense HOM05D006222 ORTHO05D007677 3.4e-63 246.1 214 57.5
Psat0s4086g0080 Pisum sativum HOM05D006222 ORTHO05D007677 7.5e-63 245.0 215 54.9
Solyc05g053880.4 Solanum lycopersicum HOM05D006222 ORTHO05D007677 9.8e-63 244.6 179 72.6
Lsat_1_v5_gn_2_38021 Lactuca sativa HOM05D006222 ORTHO05D007677 6.4e-62 241.9 245 57.6
Glyma.20G248400 Glycine max HOM05D006222 ORTHO05D007677 8.3e-62 241.5 201 61.2
Os04g0348100 Oryza sativa ssp. japonica HOM05D006222 ORTHO05D007677 7.1e-61 238.4 205 56.6
Lj5g0022978 Lotus japonicus HOM05D006222 ORTHO05D007677 2.7e-60 236.5 203 58.1
unitig_578.g15951 Utricularia gibba HOM05D006222 ORTHO05D007677 2.5e-58 229.9 293 51.5
VMungo0720G0284 Vigna mungo HOM05D006222 ORTHO05D007677 2.5e-58 229.9 186 58.6
Phvul.007G002100 Phaseolus vulgaris HOM05D006222 ORTHO05D007677 9.5e-58 228.0 186 57.5
ATR1089G038 Amborella trichopoda HOM05D006222 ORTHO05D007677 2.8e-57 226.5 269 48.7
FvH4_6g25320 Fragaria vesca HOM05D006222 ORTHO05D007677 3.1e-56 223.0 255 51.0
Ah.12g060860 Amaranthus hybridus HOM05D006222 ORTHO05D007677 3.2e-53 213.0 283 46.6
AUR62029129 Chenopodium quinoa HOM05D006222 ORTHO05D007677 4.3e-50 202.6 204 55.4
Actinidia35881 Actinidia chinensis HOM05D006222 ORTHO05D007677 1.4e-48 197.6 165 59.4
Zm00001eb086320 Zea mays HOM05D006222 ORTHO05D007677 5.2e-48 195.7 172 57.6
Nitab4.5_0000161g0130 Nicotiana tabacum HOM05D006222 ORTHO05D007677 7.6e-47 191.8 216 50.0
SMO331G0016 Selaginella moellendorffii HOM05D006222 ORTHO05D007677 1.3e-46 191.0 243 42.8
Rhsim04G0094000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.3e-43 180.3 323 43.0
QL10p043789 Quercus lobata HOM05D006222 ORTHO05D007677 6.6e-43 178.7 130 70.8
RhsimUnG0147000 Rhododendron simsii HOM05D006222 ORTHO05D007677 2.5e-42 176.8 301 45.5
FAN05G2938 Fragaria x ananassa HOM05D006222 ORTHO05D007677 1.5e-39 167.5 137 63.5
Nitab4.5_0007578g0020 Nicotiana tabacum HOM05D006222 ORTHO05D007677 1.3e-38 164.5 216 45.4
QL10p047309 Quercus lobata HOM05D006222 ORTHO05D007677 2.9e-38 163.3 194 54.1
Mapoly0037s0098 Marchantia polymorpha HOM05D006222 ORTHO05D007677 7.1e-37 158.7 262 37.0
AUR62014992 Chenopodium quinoa HOM05D006222 ORTHO05D007677 6.0e-36 155.6 166 51.8
CBR_g19109 Chara braunii HOM05D006222 ORTHO05D007677 3.0e-35 153.3 195 42.6
QL10p043792 Quercus lobata HOM05D006222 ORTHO05D007677 1.5e-34 151.0 85 82.4
QL10p047312 Quercus lobata HOM05D006222 ORTHO05D007677 3.3e-34 149.8 85 82.4
Pp3c6_17250 Physcomitrium patens HOM05D006222 ORTHO05D007677 2.1e-33 147.1 274 35.8
CSS0048231 Camellia sinensis var. sinensis HOM05D006222 ORTHO05D007677 1.4e-32 144.4 103 67.0
Haze_11067 Corylus avellana HOM05D006222 ORTHO05D007677 3.1e-32 143.3 85 75.3
Eucgr.L00544 Eucalyptus grandis HOM05D006222 ORTHO05D007677 3.4e-31 139.8 123 56.9
Haze_11066 Corylus avellana HOM05D006222 ORTHO05D007677 2.7e-28 130.2 183 48.6
HPP92_024563 Vanilla planifolia HOM05D006222 ORTHO05D007677 5.8e-23 112.5 271 31.7
Actinidia27187 Actinidia chinensis HOM05D006222 ORTHO05D007677 4.9e-22 109.4 225 41.8
MD13G1276400 Malus domestica HOM05D006222 ORTHO05D007677 4.9e-22 109.4 198 40.4
Duzib268G0844 Durio zibethinus HOM05D006222 ORTHO05D007677 2.5e-21 107.1 94 56.4
Ah.12g060290 Amaranthus hybridus HOM05D006222 ORTHO05D007677 4.6e-20 102.8 61 78.7
A03p23980 Brassica napus HOM05D006222 ORTHO05D007677 1.1e-10 71.6 64 56.2
SEGI_30148 Sequoiadendron giganteum HOM05D006222 ORTHO05D007677 3.4e-07 60.1 50 56.0
AagrBONN_evm.TU.Sc2ySwM_362.227 Anthoceros agrestis HOM05D006222 ORTHO05D007677 4.5e-07 59.7 219 27.4


User provided reference genes

Program Settings