Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g10290 Coffea canephora HOM05D006612 ORTHO05D009014 9.9e-92 340.1 174 100.0
SGA_v2.0_scaffold30G12440 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-13 80.9 104 40.4
Lsat_1_v5_gn_7_34501 Lactuca sativa HOM05D006612 ORTHO05D009014 1.2e-12 77.4 95 44.2
SGA_v2.0_scaffold187G40262 Striga asiatica HOM05D006612 ORTHO05D009014 1.2e-12 77.4 104 31.7
Cc09_g02240 Coffea canephora HOM05D006612 ORTHO05D009014 2.0e-12 76.6 135 30.4
ECA246G2421 Erigeron canadensis HOM05D000096 ORTHO05D000045 2.0e-12 76.6 103 36.9
SGA_v2.0_scaffold20G09078 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-12 75.5 111 34.2
SGA_v2.0_scaffold2648G54169 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-12 75.5 104 32.7
SGA_v2.0_scaffold37G14810 Striga asiatica HOM05D006612 ORTHO05D009014 4.6e-12 75.5 104 32.7
Cc07_g15780 Coffea canephora HOM05D006612 ORTHO05D009014 1.7e-11 73.6 120 31.7
Lsat_1_v5_gn_2_22101 Lactuca sativa HOM05D006612 ORTHO05D009014 1.7e-11 73.6 105 33.3
Dinv05943 Davidia involucrata HOM05D006612 ORTHO05D010619 3.0e-11 72.8 95 38.9
SGA_v2.0_scaffold144G35921 Striga asiatica HOM05D006612 ORTHO05D009014 3.9e-11 72.4 105 32.4
AUR62028164 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.0e-11 72.0 109 31.2
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 8.6e-11 71.2 111 32.4
AUR62000795 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.1e-10 70.9 109 31.2
SGA_v2.0_scaffold188G40334 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-10 70.5 105 32.4
SGA_v2.0_scaffold1G00025 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-10 70.5 105 31.4
SGA_v2.0_scaffold27G11559 Striga asiatica HOM05D006612 ORTHO05D009014 1.5e-10 70.5 124 32.3
Dinv08482 Davidia involucrata HOM05D000824 ORTHO05D010619 1.9e-10 70.1 95 35.8
SGA_v2.0_scaffold154G37090 Striga asiatica HOM05D006612 ORTHO05D009014 1.9e-10 70.1 106 34.0
SGA_v2.0_scaffold90G27630 Striga asiatica HOM05D006612 ORTHO05D009014 2.5e-10 69.7 103 33.0
AUR62008601 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.3e-10 68.2 109 30.3
Cc11_g04430 Coffea canephora HOM05D006612 ORTHO05D009014 7.3e-10 68.2 125 27.2
Lsat_1_v5_gn_1_29400 Lactuca sativa HOM05D006612 ORTHO05D009014 7.3e-10 68.2 117 30.8
SGA_v2.0_scaffold346G49531 Striga asiatica HOM05D006612 ORTHO05D009014 7.3e-10 68.2 106 33.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 9.5e-10 67.8 81 35.8
CSS0028456 Camellia sinensis var. sinensis HOM05D002261 ORTHO05D002334 2.1e-09 66.6 111 30.6
SGA_v2.0_scaffold181G39686 Striga asiatica HOM05D006612 ORTHO05D009014 2.1e-09 66.6 105 33.3
AUR62033963 Chenopodium quinoa HOM05D003315 ORTHO05D003407 3.6e-09 65.9 109 29.4
SGA_v2.0_scaffold121G33153 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-09 65.5 106 30.2
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 4.7e-09 65.5 106 31.1
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 6.2e-09 65.1 78 37.2
Cc01_g08100 Coffea canephora HOM05D000096 ORTHO05D000045 1.1e-08 64.3 108 32.4
SGA_v2.0_scaffold15G07247 Striga asiatica HOM05D006612 ORTHO05D009014 1.1e-08 64.3 99 33.3
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 1.8e-08 63.5 95 33.7
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 2.3e-08 63.2 111 33.3
SGA_v2.0_scaffold289G47248 Striga asiatica HOM05D006612 ORTHO05D009014 2.3e-08 63.2 114 28.9
Dinv08250 Davidia involucrata HOM05D000824 ORTHO05D010384 4.0e-08 62.4 153 25.5
Peaxi162Scf00620g00218 Petunia axillaris HOM05D002261 ORTHO05D002334 5.2e-08 62.0 104 33.7
Sopen10g004570 Solanum pennellii HOM05D002261 ORTHO05D002334 6.8e-08 61.6 104 33.7
CiPaw.01G054700 Carya illinoinensis HOM05D009267 ORTHO05D010384 8.9e-08 61.2 89 34.8
AUR62008906 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.9e-08 61.2 109 27.5
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 1.2e-07 60.8 95 33.7
CANSAT56G0625 Cannabis sativa HOM05D008860 ORTHO05D010619 2.0e-07 60.1 101 31.7
Nitab4.5_0011586g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-07 59.7 102 32.4
Peaxi162Scf00007g01337 Petunia axillaris HOM05D002261 ORTHO05D002334 2.6e-07 59.7 113 31.9
Peaxi162Scf00308g00076 Petunia axillaris HOM05D002261 ORTHO05D002334 2.6e-07 59.7 102 37.3
Peaxi162Scf00158g00318 Petunia axillaris HOM05D002261 ORTHO05D002334 3.4e-07 59.3 104 28.8
Peaxi162Scf03993g00002 Petunia axillaris HOM05D002261 ORTHO05D002334 4.4e-07 58.9 104 28.8
Ah.03g141210 Amaranthus hybridus HOM05D003315 ORTHO05D003407 7.5e-07 58.2 95 33.7
SGA_v2.0_scaffold213G42222 Striga asiatica HOM05D006612 ORTHO05D009014 7.5e-07 58.2 120 27.5
SGA_v2.0_scaffold35G14178 Striga asiatica HOM05D006612 ORTHO05D009014 1.3e-06 57.4 90 34.4
Oeu013093.1 Olea europaea HOM05D019936 ORTHO05D010619 1.7e-06 57.0 109 31.2
SGA_v2.0_scaffold478G52233 Striga asiatica HOM05D006612 ORTHO05D009014 2.9e-06 56.2 114 29.8
Hma1.2p1_0500F.1_g166880 Hydrangea macrophylla HOM05D009267 ORTHO05D010384 3.7e-06 55.8 114 29.8
Oeu024002.2 Olea europaea HOM05D008860 ORTHO05D010619 3.7e-06 55.8 94 33.0
Dinv03710 Davidia involucrata HOM05D015775 ORTHO05D010384 4.9e-06 55.5 67 35.8
AUR62013598 Chenopodium quinoa HOM05D003315 ORTHO05D003407 6.4e-06 55.1 88 28.4
SGA_v2.0_scaffold9G04714 Striga asiatica HOM05D006612 ORTHO05D009014 6.4e-06 55.1 75 36.0


User provided reference genes

Program Settings