Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 1.5e-76 289.3 127 100.0
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 3.9e-53 211.5 127 70.9
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 8.1e-51 203.8 124 66.9
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 4.0e-50 201.4 127 64.6
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 4.0e-50 201.4 125 65.6
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 6.9e-50 200.7 127 64.6
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 1.2e-49 199.9 121 66.9
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.5e-49 199.5 127 64.6
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 3.4e-49 198.4 124 65.3
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 4.4e-49 198.0 127 65.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 5.8e-49 197.6 126 64.3
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 9.9e-49 196.8 119 67.2
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.3e-48 196.4 124 65.3
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 1.7e-48 196.1 123 66.7
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.2e-48 195.7 123 65.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.9e-47 192.6 120 64.2
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 1.9e-47 192.6 122 63.1
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 3.2e-47 191.8 122 64.8
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 5.4e-47 191.0 120 64.2
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 7.1e-47 190.7 126 62.7
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 1.2e-46 189.9 127 63.8
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.1e-46 189.1 120 65.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 2.1e-46 189.1 135 60.7
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 7.8e-46 187.2 125 60.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 1.7e-45 186.0 131 60.3
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 5.1e-45 184.5 121 62.0
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 8.7e-45 183.7 120 64.2
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.1e-44 183.3 106 71.7
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.5e-44 183.0 122 63.1
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 3.3e-44 181.8 121 64.5
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 3.3e-44 181.8 125 59.2
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 4.3e-44 181.4 127 57.5
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 7.3e-44 180.6 125 60.0
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.3e-43 179.9 124 59.7
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.6e-43 179.5 123 58.5
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.6e-43 179.5 123 58.5
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 2.1e-43 179.1 121 59.5
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 6.2e-43 177.6 121 63.6
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 1.4e-42 176.4 125 60.8
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.8e-42 176.0 123 61.0
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 5.3e-42 174.5 128 57.8
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 5.3e-42 174.5 123 59.3
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 6.9e-42 174.1 125 58.4
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 9.0e-42 173.7 106 67.9
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 9.0e-42 173.7 124 58.1
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.2e-41 173.3 122 59.0
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.5e-41 172.9 123 58.5
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.5e-41 172.9 107 66.4
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 2.6e-41 172.2 118 60.2
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 9.9e-41 170.2 110 63.6
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-40 169.9 107 65.4
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.3e-40 169.9 108 64.8
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.7e-40 169.5 124 54.8
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-39 166.8 126 55.6
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 7.1e-39 164.1 111 64.0
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 7.1e-39 164.1 134 51.5
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 1.6e-38 162.9 103 67.0
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 4.6e-38 161.4 98 65.3
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 6.0e-38 161.0 98 66.3
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 6.7e-37 157.5 110 60.9
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.1e-36 156.8 119 55.5
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.6e-35 152.9 107 56.1
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 2.0e-33 146.0 102 61.8
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 3.2e-31 138.7 84 69.0
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.1e-30 136.0 123 48.0
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.5e-30 135.2 126 46.8
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.8e-29 132.9 120 45.0
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 1.6e-22 109.8 73 60.3
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 1.3e-21 106.7 75 58.7
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 5.7e-20 101.3 59 71.2
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.3e-18 94.7 111 42.3
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 6.9e-18 94.4 106 39.6
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.5e-17 93.2 53 69.8
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 3.2e-15 85.5 54 66.7
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 2.7e-14 82.4 111 36.9
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.3e-12 75.5 109 33.0
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 4.3e-12 75.1 108 37.0
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 8.2e-11 70.9 92 35.9
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.1e-10 70.5 38 76.3
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 9.4e-07 57.4 37 56.8


User provided reference genes

Program Settings