Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06850 Coffea canephora HOM05D006167 ORTHO05D007635 4.9e-31 137.1 67 100.0
HanXRQChr13g0410431 Helianthus annuus HOM05D006167 ORTHO05D007635 4.6e-21 104.0 67 70.1
Oeu012938.1 Olea europaea HOM05D006167 ORTHO05D007635 5.1e-20 100.5 68 77.9
Lsat_1_v5_gn_1_76160 Lactuca sativa HOM05D006167 ORTHO05D007635 1.5e-19 99.0 64 71.9
Solyc12g097040.1 Solanum lycopersicum HOM05D006167 ORTHO05D007635 2.1e-18 95.1 67 67.2
Hma1.2p1_0112F.1_g054980 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 6.2e-18 93.6 66 66.7
CAN.G566.4 Capsicum annuum HOM05D006167 ORTHO05D007635 8.1e-18 93.2 69 69.6
Nitab4.5_0000867g0070 Nicotiana tabacum HOM05D006167 ORTHO05D007635 1.4e-17 92.4 67 68.7
Eucgr.H02882 Eucalyptus grandis HOM05D006167 ORTHO05D007635 5.3e-17 90.5 67 67.2
ClCG06G007470 Citrullus lanatus HOM05D006167 ORTHO05D007635 9.0e-17 89.7 67 70.1
Potri.008G174000 Populus trichocarpa HOM05D006167 ORTHO05D007635 1.5e-16 89.0 67 67.2
CSS0017011 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.0e-16 88.6 67 67.2
CSS0046609 Camellia sinensis var. sinensis HOM05D006167 ORTHO05D007635 2.0e-16 88.6 67 67.2
Lsat_1_v5_gn_2_42001 Lactuca sativa HOM05D006167 ORTHO05D007635 4.5e-16 87.4 67 59.7
Potri.010G063100 Populus trichocarpa HOM05D006167 ORTHO05D007635 4.5e-16 87.4 67 67.2
DCAR_027359 Daucus carota HOM05D006167 ORTHO05D007635 5.8e-16 87.0 64 71.9
Sed0006558 Sechium edule HOM05D006167 ORTHO05D007635 5.8e-16 87.0 67 68.7
CsaV3_2G012210 Cucumis sativus L. HOM05D006167 ORTHO05D007635 7.6e-16 86.7 67 68.7
CiPaw.01G175200 Carya illinoinensis HOM05D006167 ORTHO05D007635 9.9e-16 86.3 67 65.7
MELO3C023070.2 Cucumis melo HOM05D006167 ORTHO05D007635 9.9e-16 86.3 67 67.2
Dinv29784 Davidia involucrata HOM05D006167 ORTHO05D007635 9.9e-16 86.3 67 62.7
PGR004G2513 Punica granatum HOM05D006167 ORTHO05D007635 1.3e-15 85.9 67 65.7
Actinidia32969 Actinidia chinensis HOM05D006167 ORTHO05D007635 1.7e-15 85.5 69 66.7
Dinv18834 Davidia involucrata HOM05D006167 ORTHO05D007635 2.2e-15 85.1 67 65.7
THA.LOC109117012 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 8.4e-15 83.2 67 62.7
Cpa.g.sc59.38 Carica papaya HOM05D006167 ORTHO05D007635 1.4e-14 82.4 67 61.2
Prupe.1G052700 Prunus persica HOM05D006167 ORTHO05D007635 1.9e-14 82.0 67 58.2
Atru.chr4.1872 Acer truncatum HOM05D006167 ORTHO05D007635 2.4e-14 81.6 67 61.2
Aa31LG9G4150 Aethionema arabicum HOM05D006167 ORTHO05D007635 3.2e-14 81.3 67 61.2
Hma1.2p1_0432F.1_g151790 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 5.5e-14 80.5 65 61.5
Peaxi162Scf01007g00005 Petunia axillaris HOM05D006167 ORTHO05D007635 5.5e-14 80.5 73 58.9
ECA248G1405 Erigeron canadensis HOM05D006167 ORTHO05D007635 7.1e-14 80.1 79 54.4
THA.LOC109116489 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 7.1e-14 80.1 67 59.7
THA.LOC109116515 Tarenaya hassleriana HOM05D006167 ORTHO05D007635 7.1e-14 80.1 67 59.7
EL10Ac3g06721 Beta vulgaris HOM05D006167 ORTHO05D007635 9.3e-14 79.7 67 56.7
Hma1.2p1_0144F.1_g065120 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 1.2e-13 79.3 64 59.4
Cfa014825 Carpinus fangiana HOM05D006167 ORTHO05D007635 1.6e-13 79.0 64 62.5
CANSAT78G0928 Cannabis sativa HOM05D006167 ORTHO05D007635 2.1e-13 78.6 67 58.2
Lalb_Chr03g0036881 Lupinus albus HOM05D006167 ORTHO05D007635 2.7e-13 78.2 67 56.7
SalBow3G0251 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.7e-13 78.2 70 64.3
SalBow3G4531 Salvia bowleyana HOM05D006167 ORTHO05D007635 2.7e-13 78.2 70 64.3
SalBow5G0916 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.5e-13 77.8 69 63.8
SalBow5G2020 Salvia bowleyana HOM05D006167 ORTHO05D007635 3.5e-13 77.8 69 63.8
RcHm_v2.0_Chr4g0396111 Rosa chinensis HOM05D006167 ORTHO05D007635 4.6e-13 77.4 65 58.5
Migut.N00323 Erythranthe guttata HOM05D006167 ORTHO05D007635 7.9e-13 76.6 70 61.4
SalBow5G4407 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.9e-13 76.6 70 62.9
SalBow5G4759 Salvia bowleyana HOM05D006167 ORTHO05D007635 7.9e-13 76.6 70 62.9
Thecc.04G269200 Theobroma cacao HOM05D006167 ORTHO05D007635 1.0e-12 76.3 67 58.2
Lj4g0015547 Lotus japonicus HOM05D006167 ORTHO05D007635 1.3e-12 75.9 64 65.6
AL5G12040 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 2.3e-12 75.1 67 53.7
AL5G12300 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 2.3e-12 75.1 67 53.7
Nn1g03031 Nelumbo nucifera HOM05D006167 ORTHO05D007635 2.3e-12 75.1 67 56.7
Sc19g0005700 Simmondsia chinensis HOM05D006167 ORTHO05D007635 3.0e-12 74.7 65 58.5
TWI09G0967 Tripterygium wilfordii HOM05D006167 ORTHO05D007635 3.9e-12 74.3 67 53.7
TAR362G1146 Trochodendron aralioides HOM05D006167 ORTHO05D007635 3.9e-12 74.3 67 56.7
CANSAT54G0143 Cannabis sativa HOM05D006167 ORTHO05D007635 1.1e-11 72.8 62 62.9
Glyma.20G081600 Glycine max HOM05D006167 ORTHO05D007635 1.5e-11 72.4 62 62.9
vmacro15491 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 1.5e-11 72.4 73 54.8
vmacro22827 Vaccinium macrocarpon HOM05D006167 ORTHO05D007635 1.5e-11 72.4 73 54.8
AL7G43090 Arabidopsis lyrata HOM05D006167 ORTHO05D007635 1.9e-11 72.0 67 50.7
BcaB04g17822 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
BcaC07g37498 Brassica carinata HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
A08p07960 Brassica napus HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
BolC8t47817H Brassica oleracea HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
BraA08t32818Z Brassica rapa HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
Carub.0007s2902 Capsella rubella HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
CARHR219150 Cardamine hirsuta HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
Thhalv10026745m.g Eutrema salsugineum HOM05D006167 ORTHO05D007635 2.5e-11 71.6 67 50.7
AT4G13520 Arabidopsis thaliana HOM05D006167 ORTHO05D007635 3.3e-11 71.2 67 50.7
COL.COLO4_16007 Corchorus olitorius HOM05D006167 ORTHO05D007635 3.3e-11 71.2 64 59.4
Hma1.2p1_0014F.1_g009760 Hydrangea macrophylla HOM05D006167 ORTHO05D007635 3.3e-11 71.2 64 54.7
Sp7g11110 Schrenkiella parvula HOM05D006167 ORTHO05D007635 3.3e-11 71.2 67 50.7
Duzib052G0384 Durio zibethinus HOM05D006167 ORTHO05D007635 7.4e-11 70.1 67 56.7
Duzib052G0895 Durio zibethinus HOM05D006167 ORTHO05D007635 7.4e-11 70.1 67 56.7
Duzib266G0005 Durio zibethinus HOM05D006167 ORTHO05D007635 7.4e-11 70.1 67 56.7
FAN12G1688 Fragaria x ananassa HOM05D006167 ORTHO05D007635 7.4e-11 70.1 61 57.4
FAN17G0547 Fragaria x ananassa HOM05D006167 ORTHO05D007635 7.4e-11 70.1 61 57.4
Gohir.D02G050200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 9.6e-11 69.7 67 56.7
Gohir.D09G064700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.6e-10 68.9 67 59.7
SGA_v2.0_scaffold35G14127 Striga asiatica HOM05D006167 ORTHO05D007635 1.6e-10 68.9 70 57.1
FvH4_4g05200 Fragaria vesca HOM05D006167 ORTHO05D007635 2.1e-10 68.6 61 55.7
Gorai.004G118700 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.7e-10 67.8 67 56.7
SHI00872 Sapria himalayana HOM05D006167 ORTHO05D007635 3.7e-10 67.8 65 55.4
Ca_00011_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 6.2e-10 67.0 62 53.2
Ca_26216_v3 Cicer arietinum L. HOM05D006167 ORTHO05D007635 6.2e-10 67.0 62 53.2
unitig_744.g24610 Utricularia gibba HOM05D006167 ORTHO05D007635 6.2e-10 67.0 65 56.9
Gohir.D11G199000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.4e-09 65.9 67 53.7
Gohir.D04G064600 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.8e-09 65.5 67 56.7
Gorai.011G088300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.8e-09 65.5 67 56.7
SGA_v2.0_scaffold189G40388 Striga asiatica HOM05D006167 ORTHO05D007635 1.8e-09 65.5 70 54.3
Gohir.D08G110800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 3.1e-09 64.7 67 53.7
Mapoly0016s0086 Marchantia polymorpha HOM05D006167 ORTHO05D007635 4.0e-09 64.3 66 50.0
Sc13g0003020 Simmondsia chinensis HOM05D006167 ORTHO05D007635 5.3e-09 63.9 67 52.2
Gorai.007G213200 Gossypium raimondii HOM05D006167 ORTHO05D007635 6.9e-09 63.5 67 53.7
Gorai.012G072500 Gossypium raimondii HOM05D006167 ORTHO05D007635 6.9e-09 63.5 67 55.2
Psat6g109400 Pisum sativum HOM05D006167 ORTHO05D007635 9.0e-09 63.2 62 51.6
Rhsim09G0043900 Rhododendron simsii HOM05D006167 ORTHO05D007635 1.2e-08 62.8 55 63.6
AUR62035353 Chenopodium quinoa HOM05D006167 ORTHO05D007635 1.5e-08 62.4 57 56.1
Migut.M01352 Erythranthe guttata HOM05D006167 ORTHO05D007635 1.5e-08 62.4 70 52.9
Gohir.D03G098800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.0e-08 62.0 67 53.7
Gorai.008G097400 Gossypium raimondii HOM05D006167 ORTHO05D007635 2.0e-08 62.0 67 50.7
Gohir.D12G087200 Gossypium hirsutum HOM05D006167 ORTHO05D007635 2.6e-08 61.6 67 52.2
Gorai.011G155100 Gossypium raimondii HOM05D006167 ORTHO05D007635 3.4e-08 61.2 67 53.7
Gohir.D08G046000 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.5e-08 60.8 66 53.0
Gorai.005G130300 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.5e-08 60.8 67 53.7
Gorai.008G094700 Gossypium raimondii HOM05D006167 ORTHO05D007635 4.5e-08 60.8 66 53.0
TPR.G23974 Trifolium pratense HOM05D006167 ORTHO05D007635 5.8e-08 60.5 62 50.0
Gohir.D05G314750 Gossypium hirsutum HOM05D006167 ORTHO05D007635 7.6e-08 60.1 67 52.2
Gorai.003G103700 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.0e-07 59.7 67 52.2
Gorai.009G336300 Gossypium raimondii HOM05D006167 ORTHO05D007635 1.0e-07 59.7 67 50.7
Nitab4.5_0002738g0050 Nicotiana tabacum HOM05D006167 ORTHO05D007635 1.7e-07 58.9 45 60.0
Aqoxy5G00097 Aquilegia oxysepala HOM05D006167 ORTHO05D007635 2.9e-07 58.2 67 46.3
arahy.Tifrunner.gnm1.ann1.C36CE0 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.9e-07 58.2 51 62.7
Gohir.D10G139400 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.9e-07 57.4 67 50.7
SEGI_07901 Sequoiadendron giganteum HOM05D006167 ORTHO05D007635 1.4e-06 55.8 65 44.6
Gohir.D02G123800 Gossypium hirsutum HOM05D006167 ORTHO05D007635 1.9e-06 55.5 67 49.3
Thhalv10003020m.g Eutrema salsugineum HOM05D016819 ORTHO05D017546 2.5e-06 55.1 66 51.5
Gohir.D01G140700 Gossypium hirsutum HOM05D006167 ORTHO05D007635 4.2e-06 54.3 67 49.3
Pp3c5_19670 Physcomitrium patens HOM05D006167 ORTHO05D007635 7.1e-06 53.5 59 50.8


User provided reference genes

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