Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 6.4e-123 444.1 229 100.0
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 8.2e-102 374.0 193 100.0
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 3.2e-37 159.5 201 48.8
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 6.2e-33 145.2 188 44.7
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 1.2e-25 120.9 209 39.2
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 3.6e-25 119.4 179 44.1
Nitab4.5_0000194g0190 Nicotiana tabacum HOM05D008157 ORTHO05D009575 2.1e-20 103.6 148 41.9
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 2.7e-20 103.2 200 36.5
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 1.3e-19 100.9 142 40.1
Hma1.2p1_0112F.1_g054760 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.7e-19 100.5 123 44.7
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 1.7e-19 100.5 195 37.9
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 2.3e-19 100.1 213 37.1
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 3.9e-19 99.4 171 41.5
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 6.6e-19 98.6 192 37.0
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 8.6e-19 98.2 200 35.0
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 8.6e-19 98.2 140 41.4
MSTRG.4173 Avicennia marina HOM05D008157 ORTHO05D009575 1.5e-18 97.4 133 43.6
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.9e-18 97.1 201 37.3
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 2.5e-18 96.7 194 36.6
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 6.2e-17 92.0 166 39.2
Nitab4.5_0000194g0130 Nicotiana tabacum HOM05D008157 ORTHO05D009575 6.2e-17 92.0 125 40.8
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 1.4e-16 90.9 192 38.0
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 3.1e-16 89.7 164 36.6
SGA_v2.0_scaffold67G22685 Striga asiatica HOM05D008157 ORTHO05D009575 2.0e-15 87.0 146 38.4
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 2.6e-15 86.7 168 38.1
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 3.4e-15 86.3 198 35.9
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 7.6e-15 85.1 192 35.9
Migut.G00556 Erythranthe guttata HOM05D008157 ORTHO05D009575 9.9e-15 84.7 116 40.5
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 2.2e-14 83.6 157 41.4
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 2.9e-14 83.2 143 35.7
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 4.9e-14 82.4 193 35.8
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 6.4e-14 82.0 169 35.5
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 8.4e-14 81.6 159 40.3
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 8.4e-14 81.6 192 34.9
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 1.1e-13 81.3 162 37.0
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.1e-13 81.3 171 37.4
Solyc09g090710.3 Solanum lycopersicum HOM05D008157 ORTHO05D009575 1.4e-13 80.9 126 37.3
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 1.9e-13 80.5 197 33.5
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 2.4e-13 80.1 143 37.8
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 5.4e-13 79.0 194 34.0
VMungo0720G2187 Vigna mungo HOM05D012468 ORTHO05D009575 1.6e-12 77.4 182 33.5
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 2.7e-12 76.6 154 37.0
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 1.3e-11 74.3 144 34.0
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 1.7e-11 73.9 170 37.1
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 2.3e-11 73.6 189 30.2
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 3.9e-11 72.8 147 34.7
Medtr1g073260 Medicago truncatula HOM05D012468 ORTHO05D009575 8.7e-11 71.6 100 44.0
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.1e-10 71.2 198 33.3
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.5e-10 70.9 149 38.9
Duzib151G0689 Durio zibethinus HOM05D008157 ORTHO05D009575 1.5e-10 70.9 122 38.5
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 1.5e-10 70.9 200 34.0
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 2.5e-10 70.1 197 33.5
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 4.3e-10 69.3 136 36.0
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 5.6e-10 68.9 189 31.7
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 1.3e-09 67.8 170 36.5
arahy.Tifrunner.gnm1.ann1.U79AWX Arachis hypogaea HOM05D012468 ORTHO05D009575 4.8e-09 65.9 210 30.0
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 6.2e-09 65.5 116 38.8
arahy.Tifrunner.gnm1.ann1.JW933S Arachis hypogaea HOM05D012468 ORTHO05D009575 1.4e-08 64.3 209 29.2
RcHm_v2.0_Chr4g0395401 Rosa chinensis HOM05D008157 ORTHO05D009575 1.4e-08 64.3 81 46.9
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.8e-08 63.9 192 32.3
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.8e-08 63.9 89 43.8
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 5.3e-08 62.4 177 32.8
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 1.5e-07 60.8 196 30.1
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 4.4e-07 59.3 119 41.2
Lsat_1_v5_gn_6_66080 Lactuca sativa HOM05D008157 ORTHO05D035152 7.6e-07 58.5 151 33.1
Psat6g131320 Pisum sativum HOM05D012468 ORTHO05D009575 7.6e-07 58.5 85 42.4
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 7.6e-07 58.5 178 33.1
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 1.3e-06 57.8 115 36.5
GSVIVG01027916001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.3e-06 57.8 62 46.8
Lalb_Chr06g0169531 Lupinus albus HOM05D012468 ORTHO05D009575 3.8e-06 56.2 73 38.4
Aa31LG9G18080 Aethionema arabicum HOM05D012000 ORTHO05D013959 4.9e-06 55.8 138 37.7
Psat6g107200 Pisum sativum HOM05D016547 ORTHO05D009575 6.4e-06 55.5 126 32.5
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 8.4e-06 55.1 119 36.1
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 8.4e-06 55.1 119 36.1
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 8.4e-06 55.1 127 35.4


User provided reference genes

Program Settings