Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 1.9e-250 868.6 422 100.0
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 1.1e-168 597.0 424 67.0
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 6.0e-167 591.3 411 68.4
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.0e-166 589.0 425 66.6
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 3.9e-166 588.6 411 68.1
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 5.1e-166 588.2 425 66.4
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 6.6e-166 587.8 417 69.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 1.9e-165 586.3 421 67.0
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 4.7e-164 581.6 416 67.1
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 4.7e-164 581.6 417 66.7
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 3.1e-163 578.9 425 65.9
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 9.0e-163 577.4 423 66.9
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.6e-162 575.9 414 68.6
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.2e-160 568.5 432 64.4
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 1.2e-159 567.0 419 64.9
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 2.1e-159 566.2 428 64.7
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.7e-158 563.1 415 67.2
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 2.3e-158 562.8 415 63.6
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 8.7e-158 560.8 420 64.8
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 1.9e-157 559.7 426 64.8
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 4.3e-157 558.5 426 64.8
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 5.6e-157 558.1 419 64.4
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.8e-156 555.8 422 64.5
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 2.8e-156 555.8 421 63.4
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.1e-155 553.9 421 63.2
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 1.1e-155 553.9 412 65.8
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 1.4e-155 553.5 417 62.6
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 3.1e-155 552.4 522 54.6
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 3.1e-155 552.4 423 62.6
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 5.3e-155 551.6 433 62.4
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 6.9e-155 551.2 416 63.5
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 9.0e-155 550.8 417 63.5
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.2e-154 550.4 426 62.4
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 3.4e-154 548.9 424 63.0
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 9.9e-154 547.4 417 63.8
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.7e-153 546.6 418 65.1
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 2.9e-153 545.8 421 63.7
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.4e-153 544.7 421 61.5
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 4.2e-152 542.0 412 62.1
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 7.1e-152 541.2 413 63.2
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 9.3e-152 540.8 427 63.2
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 1.2e-151 540.4 431 61.9
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 1.2e-151 540.4 417 63.5
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 7.9e-151 537.7 420 63.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.8e-150 536.6 428 59.3
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 3.9e-150 535.4 427 63.0
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 6.7e-150 534.6 428 59.1
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 7.4e-149 531.2 417 61.6
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 7.4e-149 531.2 424 62.5
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 7.4e-149 531.2 424 62.5
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 9.6e-149 530.8 375 67.7
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 2.8e-148 529.3 427 61.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 3.7e-148 528.9 425 61.4
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.2e-148 528.1 420 61.9
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 8.1e-148 527.7 420 62.1
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 8.1e-148 527.7 423 61.0
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.4e-147 526.9 377 66.6
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 5.8e-146 521.5 442 60.6
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 1.3e-145 520.4 373 66.2
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.8e-145 518.8 410 61.0
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 4.9e-145 518.5 409 63.8
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 6.4e-145 518.1 427 59.7
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 7.1e-144 514.6 435 59.8
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 9.3e-144 514.2 409 63.8
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 2.7e-143 512.7 423 60.5
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 6.0e-143 511.5 426 60.1
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 1.6e-140 503.4 654 44.6
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 3.7e-140 502.3 424 59.9
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 4.8e-140 501.9 424 58.7
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 1.1e-136 490.7 421 58.0
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.7e-135 486.1 404 59.4
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 2.3e-134 483.0 356 66.6
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.9e-134 482.3 362 63.5
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 4.3e-133 478.8 391 60.6
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 9.7e-133 477.6 421 56.5
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 2.4e-131 473.0 366 62.8
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 7.6e-130 468.0 429 55.7
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.7e-129 466.8 423 55.6
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 3.6e-127 459.1 353 62.3
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 3.0e-126 456.1 419 54.2
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 3.9e-126 455.7 426 54.9
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 1.9e-125 453.4 352 59.7
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 2.2e-124 449.9 418 55.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 3.7e-124 449.1 419 53.7
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 3.7e-124 449.1 419 53.7
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 3.1e-123 446.0 402 56.5
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.1e-123 445.7 417 53.7
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.1e-123 445.7 417 53.7
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 3.8e-121 439.1 401 54.9
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 5.0e-121 438.7 419 53.2
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.5e-120 436.4 428 53.0
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.9e-114 415.2 404 52.0
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 5.7e-109 398.7 306 64.4
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 7.0e-107 391.7 420 48.1
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 5.2e-102 375.6 303 59.7
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.3e-88 329.7 289 57.1
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.1e-75 288.1 454 37.7
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 6.0e-74 282.3 455 38.9
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.4e-69 266.5 233 59.2
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 4.6e-66 256.1 272 50.7
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 8.6e-65 251.9 207 57.0
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 8.3e-60 235.3 203 56.7
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 6.2e-55 219.2 200 54.0
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 1.1e-51 208.4 206 50.5
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.7e-44 184.5 146 62.3
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 4.2e-43 179.9 178 51.7
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.5e-37 161.4 239 41.4
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.7e-36 157.9 113 63.7
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 8.4e-36 155.6 122 60.7
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 9.6e-24 115.5 100 57.0
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 6.3e-15 86.3 79 46.8
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 3.1e-14 84.0 100 45.0
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 3.2e-11 73.9 73 54.8
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 4.2e-11 73.6 197 27.9
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 2.1e-10 71.2 125 36.8
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 3.3e-08 63.9 50 64.0
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 3.7e-07 60.5 53 52.8
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 1.8e-06 58.2 229 26.2


User provided reference genes

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