Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g03130 Coffea canephora HOM05D007677 ORTHO05D009728 3.5e-85 318.2 150 100.0
Oeu037682.1 Olea europaea HOM05D007677 ORTHO05D009728 5.0e-68 261.2 151 80.8
Peaxi162Scf00196g00106 Petunia axillaris HOM05D007677 ORTHO05D009728 5.6e-67 257.7 148 81.1
DCAR_030598 Daucus carota HOM05D007677 ORTHO05D009728 4.0e-65 251.5 150 76.0
Thecc.04G221700 Theobroma cacao HOM05D007677 ORTHO05D009728 5.2e-65 251.1 139 83.5
Gohir.A02G031000 Gossypium hirsutum HOM05D007677 ORTHO05D009728 1.2e-64 250.0 150 76.0
Manes.03G184600 Manihot esculenta HOM05D007677 ORTHO05D009728 2.0e-64 249.2 150 76.7
Gohir.D02G037900 Gossypium hirsutum HOM05D007677 ORTHO05D009728 4.4e-64 248.1 150 75.3
Gorai.005G041800 Gossypium raimondii HOM05D007677 ORTHO05D009728 4.4e-64 248.1 150 75.3
Ciclev10006064m.g Citrus clementina HOM05D007677 ORTHO05D009728 7.5e-64 247.3 140 80.7
SGA_v2.0_scaffold237G43825 Striga asiatica HOM05D007677 ORTHO05D009728 9.9e-64 246.9 156 72.4
CSS0026660 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 4.9e-63 244.6 150 76.0
COL.COLO4_21648 Corchorus olitorius HOM05D007677 ORTHO05D009728 6.4e-63 244.2 141 80.1
CiPaw.02G092500 Carya illinoinensis HOM05D007677 ORTHO05D009728 5.4e-62 241.1 150 76.7
Sopen01g031880 Solanum pennellii HOM05D007677 ORTHO05D009728 5.4e-62 241.1 146 76.7
Duzib212G0325 Durio zibethinus HOM05D001530 ORTHO05D003676 7.1e-62 240.7 139 79.1
Nn1g02165 Nelumbo nucifera HOM05D007677 ORTHO05D009728 1.2e-61 240.0 150 73.3
Solyc01g080100.3 Solanum lycopersicum HOM05D007677 ORTHO05D009728 2.7e-61 238.8 146 76.0
PGSC0003DMG400033121 Solanum tuberosum HOM05D007677 ORTHO05D009728 4.6e-61 238.0 146 75.3
MD13G1183200 Malus domestica HOM05D007677 ORTHO05D009728 6.0e-61 237.7 152 73.7
VMungo1215G2604 Vigna mungo HOM05D007677 ORTHO05D009728 6.0e-61 237.7 146 76.0
Phvul.003G092600 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 7.8e-61 237.3 146 76.0
Eucgr.H03598 Eucalyptus grandis HOM05D007677 ORTHO05D009728 1.3e-60 236.5 152 73.0
TWI09G0567 Tripterygium wilfordii HOM05D007677 ORTHO05D009728 1.3e-60 236.5 152 72.4
QL06p004212 Quercus lobata HOM05D007677 ORTHO05D009728 2.3e-60 235.7 149 73.2
RcHm_v2.0_Chr4g0418331 Rosa chinensis HOM05D007677 ORTHO05D009728 2.5e-59 232.3 149 72.5
FvH4_4g14500 Fragaria vesca HOM05D007677 ORTHO05D009728 4.3e-59 231.5 151 71.5
FAN12G4178 Fragaria x ananassa HOM05D007677 ORTHO05D009728 4.3e-59 231.5 151 71.5
Sabra10G0011000 Salix brachista HOM05D001530 ORTHO05D004168 7.3e-59 230.7 146 72.6
CiPaw.01G160100 Carya illinoinensis HOM05D007677 ORTHO05D009728 1.2e-58 229.9 142 74.6
Glyma.15G104100 Glycine max HOM05D007677 ORTHO05D009728 1.2e-58 229.9 150 72.0
Glyma.13G208700 Glycine max HOM05D007677 ORTHO05D009728 2.1e-58 229.2 150 71.3
Lj6P565T22 Lonicera japonica HOM05D007677 ORTHO05D009728 2.8e-58 228.8 150 71.3
CANSAT78G2143 Cannabis sativa HOM05D007677 ORTHO05D009728 4.7e-58 228.0 142 76.8
CsaV3_3G013730 Cucumis sativus L. HOM05D007677 ORTHO05D009728 4.7e-58 228.0 142 73.9
Glyma.17G017000 Glycine max HOM05D007677 ORTHO05D009728 4.7e-58 228.0 146 74.0
Prupe.1G151500 Prunus persica HOM05D007677 ORTHO05D009728 4.7e-58 228.0 152 73.0
FAN07G0089 Fragaria x ananassa HOM05D007677 ORTHO05D009728 6.2e-58 227.6 151 70.2
MD16G1184100 Malus domestica HOM05D007677 ORTHO05D009728 6.2e-58 227.6 155 70.3
ClCG05G005440 Citrullus lanatus HOM05D007677 ORTHO05D009728 8.1e-58 227.3 141 73.8
MELO3C006567.2 Cucumis melo HOM05D007677 ORTHO05D009728 8.1e-58 227.3 142 73.2
Phvul.006G153800 Phaseolus vulgaris HOM05D007677 ORTHO05D009728 8.1e-58 227.3 150 71.3
vmacro08279 Vaccinium macrocarpon HOM05D007677 ORTHO05D009728 6.8e-57 224.2 157 68.2
Aqoxy2G03269 Aquilegia oxysepala HOM05D007677 ORTHO05D009728 1.2e-56 223.4 139 71.9
CSS0045125 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.0e-56 222.6 159 67.3
Migut.G00291 Erythranthe guttata HOM05D007677 ORTHO05D009728 5.8e-56 221.1 147 70.7
Sed0011127 Sechium edule HOM05D007677 ORTHO05D009728 5.8e-56 221.1 142 72.5
Haze_00962 Corylus avellana HOM05D007677 ORTHO05D009728 7.6e-56 220.7 150 70.7
Lj4g0019321 Lotus japonicus HOM05D007677 ORTHO05D009728 1.3e-55 219.9 149 69.8
PSO407G0046 Papaver somniferum HOM05D007677 ORTHO05D009728 1.3e-55 219.9 141 75.2
Glyma.07G257100 Glycine max HOM05D007677 ORTHO05D009728 2.2e-55 219.2 146 71.2
PGR004G0596 Punica granatum HOM05D007677 ORTHO05D009728 2.2e-55 219.2 140 72.9
Cfa015583 Carpinus fangiana HOM05D007677 ORTHO05D009728 2.9e-55 218.8 142 73.2
PSO170G6325 Papaver somniferum HOM05D007677 ORTHO05D009728 2.9e-55 218.8 141 74.5
Lj6g0003442 Lotus japonicus HOM05D007677 ORTHO05D009728 3.8e-55 218.4 152 68.4
Nitab4.5_0001247g0090 Nicotiana tabacum HOM05D007677 ORTHO05D009728 4.9e-55 218.0 133 76.7
arahy.Tifrunner.gnm1.ann1.PDVV0K Arachis hypogaea HOM05D007677 ORTHO05D009728 1.1e-54 216.9 150 69.3
Medtr4g117270 Medicago truncatula HOM05D007677 ORTHO05D009728 3.2e-54 215.3 146 71.2
TAR633G1088 Trochodendron aralioides HOM05D007677 ORTHO05D009728 1.2e-53 213.4 156 64.7
CSS0000052 Camellia sinensis var. sinensis HOM05D007677 ORTHO05D009728 2.1e-53 212.6 150 70.0
arahy.Tifrunner.gnm1.ann1.UI8DPT Arachis hypogaea HOM05D007677 ORTHO05D009728 2.7e-53 212.2 150 68.0
TPR.G30685 Trifolium pratense HOM05D007677 ORTHO05D009728 3.5e-53 211.8 150 67.3
VMungo0540G0472 Vigna mungo HOM05D007677 ORTHO05D009728 3.5e-53 211.8 150 67.3
Ca_00644_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 4.6e-53 211.5 150 67.3
Psat4g031560 Pisum sativum HOM05D007677 ORTHO05D009728 4.6e-53 211.5 146 67.8
Ca_21594_v3 Cicer arietinum L. HOM05D007677 ORTHO05D009728 7.8e-53 210.7 142 68.3
Medtr2g022190 Medicago truncatula HOM05D007677 ORTHO05D009728 2.3e-52 209.1 150 68.0
TPR.G20115 Trifolium pratense HOM05D007677 ORTHO05D009728 3.9e-52 208.4 143 69.9
Lalb_Chr18g0056081 Lupinus albus HOM05D007677 ORTHO05D009728 3.3e-51 205.3 145 66.9
Psat1g183560 Pisum sativum HOM05D007677 ORTHO05D009728 5.6e-51 204.5 150 66.0
AUR62030087 Chenopodium quinoa HOM05D007677 ORTHO05D007693 1.1e-49 200.3 132 71.2
Sc13g0003990 Simmondsia chinensis HOM05D007677 ORTHO05D009728 3.1e-49 198.7 149 62.4
Dinv38394 Davidia involucrata HOM05D007677 ORTHO05D009728 2.4e-46 189.1 135 68.1
THA.LOC104820106 Tarenaya hassleriana HOM05D001407 ORTHO05D001314 4.6e-45 184.9 149 58.4
BcaC05g30051 Brassica carinata HOM05D007677 ORTHO05D009728 1.5e-40 169.9 151 53.0
A05p41840 Brassica napus HOM05D007677 ORTHO05D009728 3.4e-40 168.7 151 52.3
BraA05t22903Z Brassica rapa HOM05D007677 ORTHO05D009728 3.4e-40 168.7 151 52.3
BcaNung06667 Brassica carinata HOM05D007677 ORTHO05D009728 7.6e-40 167.5 151 52.3
C05p61090 Brassica napus HOM05D007677 ORTHO05D009728 9.9e-40 167.2 151 52.3
BolC5t34766H Brassica oleracea HOM05D007677 ORTHO05D009728 9.9e-40 167.2 151 52.3
Sp3g05100 Schrenkiella parvula HOM05D007677 ORTHO05D009728 9.9e-40 167.2 151 52.3
AL3G17000 Arabidopsis lyrata HOM05D007677 ORTHO05D009728 4.9e-39 164.9 151 53.0
Aa31LG5G16660 Aethionema arabicum HOM05D007677 ORTHO05D009728 1.1e-38 163.7 150 52.7
AT3G06145 Arabidopsis thaliana HOM05D007677 ORTHO05D009728 4.2e-38 161.8 149 51.7
Thhalv10021653m.g Eutrema salsugineum HOM05D007677 ORTHO05D009728 4.2e-38 161.8 145 53.1
Carub.0003s0558 Capsella rubella HOM05D007677 ORTHO05D009728 9.3e-38 160.6 151 51.0
CARHR080660 Cardamine hirsuta HOM05D007677 ORTHO05D009728 7.9e-37 157.5 145 51.7
TAR362G0152 Trochodendron aralioides HOM05D007677 ORTHO05D009728 8.7e-36 154.1 113 60.2
SHI00378 Sapria himalayana HOM05D007677 ORTHO05D009728 6.2e-34 147.9 142 50.7
ATR0626G325 Amborella trichopoda HOM05D007677 ORTHO05D009728 1.4e-33 146.7 127 57.5
SEGI_19260 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 2.2e-31 139.4 128 53.9
Lsat_1_v5_gn_7_41320 Lactuca sativa HOM05D007677 ORTHO05D009728 8.7e-28 127.5 87 66.7
Atru.chr4.2568 Acer truncatum HOM05D007677 ORTHO05D009728 2.5e-22 109.4 68 73.5
EL10Ac3g06358 Beta vulgaris HOM05D007677 ORTHO05D009728 2.3e-20 102.8 74 63.5
Potri.010G030701 Populus trichocarpa HOM05D007677 ORTHO05D009728 3.0e-20 102.4 81 60.5
MBI17_g34455_MAGBIO Magnolia biondii HOM05D002055 ORTHO05D002120 5.7e-19 98.2 61 67.2
SEGI_22306 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 1.1e-17 94.0 122 38.5
SEGI_22697 Sequoiadendron giganteum HOM05D007677 ORTHO05D009728 9.0e-17 90.9 117 39.3


User provided reference genes

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