Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 4.8e-238 827.4 410 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 3.5e-172 608.6 408 72.8
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.1e-165 587.0 409 71.1
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 2.3e-163 579.3 413 68.5
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 3.9e-163 578.6 410 71.0
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 9.6e-162 573.9 425 68.5
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.3e-161 573.5 378 72.5
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.8e-160 569.7 409 70.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 2.4e-160 569.3 421 66.7
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 4.0e-160 568.5 408 66.7
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 6.9e-160 567.8 411 70.1
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 1.7e-158 563.1 418 66.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 1.7e-158 563.1 415 67.2
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.8e-158 562.0 406 69.0
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 1.1e-157 560.5 415 67.0
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 1.4e-157 560.1 432 63.7
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 3.2e-157 558.9 402 69.4
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 7.1e-157 557.8 411 68.9
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 6.0e-156 554.7 421 64.6
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.3e-155 553.5 421 65.6
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 2.3e-155 552.7 423 64.8
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.3e-155 552.7 426 64.8
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.9e-155 552.0 422 62.8
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 3.3e-154 548.9 414 65.7
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 9.6e-154 547.4 421 65.6
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 8.2e-153 544.3 417 65.2
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 1.2e-151 540.4 420 63.8
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 3.4e-151 538.9 421 63.9
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.7e-150 536.6 421 64.8
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 5.0e-150 535.0 414 63.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 5.0e-150 535.0 420 64.3
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.9e-149 533.1 421 62.2
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 1.9e-149 533.1 418 64.1
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 3.2e-149 532.3 432 61.6
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 7.1e-149 531.2 410 64.4
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 6.1e-148 528.1 420 62.9
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 7.9e-148 527.7 410 64.1
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 2.3e-147 526.2 416 64.4
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.3e-147 526.2 403 64.3
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.5e-146 523.5 414 61.8
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 5.7e-146 521.5 414 62.8
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 3.7e-145 518.8 427 61.6
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 3.7e-145 518.8 394 65.5
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 6.9e-144 514.6 416 62.3
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 9.0e-144 514.2 419 62.1
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 1.2e-143 513.8 416 63.7
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.5e-143 513.5 391 64.7
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 2.0e-143 513.1 407 63.1
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 3.4e-143 512.3 356 68.3
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 5.9e-143 511.5 423 60.8
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 8.5e-142 507.7 412 60.2
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 5.5e-141 505.0 449 58.8
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 2.0e-138 496.5 410 59.8
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 2.5e-138 496.1 397 63.7
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 2.2e-137 493.0 388 62.4
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 1.0e-134 484.2 393 60.8
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.0e-130 469.9 411 59.6
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.7e-129 466.8 374 61.8
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 3.5e-127 459.1 333 66.1
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 7.7e-127 458.0 341 64.5
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 7.2e-125 451.4 376 58.8
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 2.1e-124 449.9 393 56.5
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 3.6e-124 449.1 431 55.0
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.5e-122 443.7 296 70.6
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 2.2e-121 439.9 412 56.6
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 6.3e-121 438.3 421 55.6
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.1e-117 427.6 437 55.4
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 5.7e-114 415.2 305 66.9
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.6e-111 407.1 379 58.3
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 3.5e-111 406.0 282 69.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 8.3e-105 384.8 306 62.4
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 1.9e-101 373.6 338 55.6
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 4.4e-98 362.5 290 61.4
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 3.7e-97 359.4 421 47.0
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 9.2e-96 354.8 433 48.5
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.6e-95 352.4 304 54.9
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 2.9e-94 349.7 409 46.2
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 1.7e-89 334.0 338 51.2
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 3.2e-88 329.7 289 58.8
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 3.2e-80 303.1 205 69.3
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.0e-75 286.2 198 68.7
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 5.2e-75 285.8 372 43.0
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.4e-74 283.1 211 65.4
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 9.9e-74 281.6 416 39.4
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.2e-68 264.6 251 55.0
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 2.8e-60 236.9 277 46.9
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 6.0e-55 219.2 203 58.6
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 2.1e-44 184.1 186 51.1
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.1e-44 184.1 134 72.4
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 6.3e-36 156.0 126 57.1
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 1.2e-34 151.8 129 64.3
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.6e-34 149.1 101 69.3
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 2.5e-32 144.1 123 60.2
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 4.1e-27 126.7 111 62.2
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 3.2e-24 117.1 129 48.1
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.8e-22 111.3 122 51.6
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.3e-21 106.7 130 45.4
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 4.3e-21 106.7 130 45.4
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 2.3e-14 84.3 83 50.6
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.4e-13 79.3 92 48.9
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.4e-13 79.3 51 68.6
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 1.1e-11 75.5 59 66.1
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 2.0e-10 71.2 43 83.7
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.9e-09 67.4 61 60.7
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 8.5e-09 65.9 81 49.4


User provided reference genes

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