Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g39200 Coffea canephora HOM05D003601 ORTHO05D153088 3.6e-35 151.0 73 100.0
Cc05_g04050 Coffea canephora HOM05D003601 ORTHO05D004896 2.4e-07 58.5 33 66.7
FAN05G2697 Fragaria x ananassa HOM05D004408 ORTHO05D005486 4.1e-07 57.8 38 55.3
Peaxi162Scf01343g00152 Petunia axillaris HOM05D003601 ORTHO05D004896 4.1e-07 57.8 33 66.7
Sopen02g026770 Solanum pennellii HOM05D003601 ORTHO05D004896 9.2e-07 56.6 33 63.6
PGSC0003DMG400013655 Solanum tuberosum HOM05D003601 ORTHO05D004896 9.2e-07 56.6 33 63.6
Thecc.04G197100 Theobroma cacao HOM05D003601 ORTHO05D004896 9.2e-07 56.6 33 69.7
Manes.02G115900 Manihot esculenta HOM05D003601 ORTHO05D004896 1.2e-06 56.2 33 66.7
Peaxi162Scf00036g00412 Petunia axillaris HOM05D003601 ORTHO05D004896 1.6e-06 55.8 28 75.0
Duzib151G0301 Durio zibethinus HOM05D003601 ORTHO05D004896 2.0e-06 55.5 28 78.6
Hund16704 Selenicereus undatus HOM05D003601 ORTHO05D004896 2.0e-06 55.5 28 78.6
Sc08g0001910 Simmondsia chinensis HOM05D003601 ORTHO05D004896 2.0e-06 55.5 44 50.0
TAR375G0212 Trochodendron aralioides HOM05D003601 ORTHO05D004896 2.7e-06 55.1 33 63.6
FAN02G3979 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.5e-06 54.7 34 58.8
FAN09G0115 Fragaria x ananassa HOM05D004408 ORTHO05D005486 3.5e-06 54.7 34 58.8
Gohir.A03G095300 Gossypium hirsutum HOM05D003601 ORTHO05D004896 3.5e-06 54.7 33 66.7
Gohir.D02G113600 Gossypium hirsutum HOM05D003601 ORTHO05D004896 3.5e-06 54.7 33 66.7
Gorai.005G129300 Gossypium raimondii HOM05D003601 ORTHO05D004896 3.5e-06 54.7 33 66.7
ClCG08G004950 Citrullus lanatus HOM05D003601 ORTHO05D004896 4.6e-06 54.3 28 75.0
MELO3C010640.2 Cucumis melo HOM05D003601 ORTHO05D004896 4.6e-06 54.3 48 47.9
Manes.07G071780 Manihot esculenta HOM05D003601 ORTHO05D004896 4.6e-06 54.3 33 63.6
Nitab4.5_0010133g0020 Nicotiana tabacum HOM05D003601 ORTHO05D004896 4.6e-06 54.3 48 50.0
MSTRG.17333 Avicennia marina HOM05D003601 ORTHO05D004896 6.0e-06 53.9 43 60.5
PSO541G5643 Papaver somniferum HOM05D003601 ORTHO05D004896 6.0e-06 53.9 33 63.6
PSO675G3308 Papaver somniferum HOM05D003601 ORTHO05D004896 6.0e-06 53.9 33 63.6
AUR62016842 Chenopodium quinoa HOM05D003601 ORTHO05D004896 7.8e-06 53.5 29 69.0
Dinv18735 Davidia involucrata HOM05D003601 ORTHO05D004896 7.8e-06 53.5 33 60.6
Glyma.05G210600 Glycine max HOM05D003601 ORTHO05D004896 7.8e-06 53.5 28 75.0
Glyma.08G286000 Glycine max HOM05D003601 ORTHO05D004896 7.8e-06 53.5 28 75.0
Nn2g12387 Nelumbo nucifera HOM05D003601 ORTHO05D004896 7.8e-06 53.5 33 60.6
TAR374G1433 Trochodendron aralioides HOM05D003601 ORTHO05D004896 7.8e-06 53.5 33 60.6
TAR374G1718 Trochodendron aralioides HOM05D003601 ORTHO05D004896 7.8e-06 53.5 33 60.6
VMungo0331G0886 Vigna mungo HOM05D003601 ORTHO05D004896 7.8e-06 53.5 28 75.0


User provided reference genes

Program Settings