Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g39090 Coffea canephora HOM05D008687 ORTHO05D010822 3.2e-18 94.0 45 100.0
Solyc01g097020.4 Solanum lycopersicum HOM05D008687 ORTHO05D010822 1.8e-08 61.6 33 78.8
Nitab4.5_0006420g0050 Nicotiana tabacum HOM05D008687 ORTHO05D010822 2.3e-08 61.2 33 78.8
Hma1.2p1_0384F.1_g141170 Hydrangea macrophylla HOM05D008687 ORTHO05D010822 5.1e-08 60.1 33 78.8
Nn1g02205 Nelumbo nucifera HOM05D008687 ORTHO05D010822 6.7e-08 59.7 34 79.4
Nitab4.5_0002247g0150 Nicotiana tabacum HOM05D008687 ORTHO05D010822 6.7e-08 59.7 33 75.8
Nn4g26235 Nelumbo nucifera HOM05D008687 ORTHO05D010822 1.5e-07 58.5 33 81.8
CiPaw.01G073700 Carya illinoinensis HOM05D008687 ORTHO05D010822 3.3e-07 57.4 32 81.2
Prupe.2G184600 Prunus persica HOM05D008687 ORTHO05D010822 3.3e-07 57.4 33 81.8
CSS0023630 Camellia sinensis var. sinensis HOM05D008687 ORTHO05D010822 4.3e-07 57.0 33 75.8
Thecc.01G345800 Theobroma cacao HOM05D008687 ORTHO05D010822 4.3e-07 57.0 33 78.8
Gohir.A11G095700 Gossypium hirsutum HOM05D008687 ORTHO05D010822 5.7e-07 56.6 33 72.7
Gohir.D11G100600 Gossypium hirsutum HOM05D008687 ORTHO05D010822 5.7e-07 56.6 33 72.7
Gorai.007G106900 Gossypium raimondii HOM05D008687 ORTHO05D010822 5.7e-07 56.6 33 72.7
TAR374G0349 Trochodendron aralioides HOM05D008687 ORTHO05D010822 7.4e-07 56.2 33 72.7
MD01G1077100 Malus domestica HOM05D008687 ORTHO05D010822 9.7e-07 55.8 33 75.8
Manes.01G247900 Manihot esculenta HOM05D008687 ORTHO05D010822 9.7e-07 55.8 33 78.8
Manes.05G025100 Manihot esculenta HOM05D008687 ORTHO05D010822 1.3e-06 55.5 33 75.8
MD07G1146600 Malus domestica HOM05D008687 ORTHO05D010822 1.6e-06 55.1 33 75.8
RcHm_v2.0_Chr1g0359021 Rosa chinensis HOM05D008687 ORTHO05D010822 1.6e-06 55.1 33 72.7
Migut.B01844 Erythranthe guttata HOM05D008687 ORTHO05D010822 4.8e-06 53.5 33 72.7
FAN03G1283 Fragaria x ananassa HOM05D008687 ORTHO05D010822 4.8e-06 53.5 33 69.7
FAN06G2082 Fragaria x ananassa HOM05D036424 ORTHO05D010822 4.8e-06 53.5 33 69.7
Lj3g0001832 Lotus japonicus HOM05D008687 ORTHO05D010822 4.8e-06 53.5 33 66.7
FAN10G1050 Fragaria x ananassa HOM05D036424 ORTHO05D010822 8.2e-06 52.8 35 65.7
FAN10G4301 Fragaria x ananassa HOM05D036424 ORTHO05D010822 8.2e-06 52.8 35 65.7


User provided reference genes

Program Settings