Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g38690 Coffea canephora HOM05D003721 ORTHO05D004303 0.0e+00 1328.5 753 100.0
Dinv32529 Davidia involucrata HOM05D003721 ORTHO05D004303 2.9e-228 795.8 791 60.2
CSS0038344 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 4.3e-224 781.9 770 61.0
CSS0014201 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 2.1e-223 779.6 771 61.2
Thecc.01G351200 Theobroma cacao HOM05D003721 ORTHO05D004303 1.1e-216 757.3 777 61.3
COL.COLO4_06374 Corchorus olitorius HOM05D003721 ORTHO05D004303 2.8e-215 752.7 776 59.3
Atru.chr5.592 Acer truncatum HOM05D003721 ORTHO05D004303 1.2e-213 747.3 800 57.0
Duzib133G0509 Durio zibethinus HOM05D003721 ORTHO05D004303 6.8e-206 721.5 777 57.8
Dinv43871 Davidia involucrata HOM05D003721 ORTHO05D004303 8.9e-206 721.1 789 56.9
CSS0042065 Camellia sinensis var. sinensis HOM05D003721 ORTHO05D004303 4.9e-204 715.3 791 56.8
Sopen01g039000 Solanum pennellii HOM05D003721 ORTHO05D004303 2.4e-203 713.0 767 57.2
Solyc01g095210.3 Solanum lycopersicum HOM05D003721 ORTHO05D004303 4.2e-203 712.2 768 57.3
Manes.07G084500 Manihot esculenta HOM05D003721 ORTHO05D004303 3.9e-201 705.7 789 56.3
Potri.014G091300 Populus trichocarpa HOM05D003721 ORTHO05D004303 1.3e-199 700.7 784 55.6
Cfa003861 Carpinus fangiana HOM05D003721 ORTHO05D004303 8.1e-199 698.0 801 55.1
Rhsim07G0009400 Rhododendron simsii HOM05D003721 ORTHO05D004303 4.0e-198 695.7 942 49.6
Actinidia20169 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.5e-197 693.7 800 57.2
TAR629G3186 Trochodendron aralioides HOM05D003721 ORTHO05D004303 2.6e-197 693.0 810 53.3
Peaxi162Scf00020g01717 Petunia axillaris HOM05D003721 ORTHO05D004303 5.8e-197 691.8 779 57.0
Potri.002G165500 Populus trichocarpa HOM05D003721 ORTHO05D004303 7.6e-197 691.4 794 55.0
TWI59G1183 Tripterygium wilfordii HOM05D003721 ORTHO05D004303 7.6e-197 691.4 793 54.2
vmacro13221 Vaccinium macrocarpon HOM05D003721 ORTHO05D004303 6.4e-196 688.3 836 52.9
Ciclev10018933m.g Citrus clementina HOM05D003721 ORTHO05D004303 7.1e-195 684.9 794 55.0
Nn1g01721 Nelumbo nucifera HOM05D003721 ORTHO05D004303 3.5e-194 682.6 803 53.5
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 1.3e-193 680.6 770 59.4
QL04p055909 Quercus lobata HOM05D003721 ORTHO05D004303 1.1e-192 677.6 798 53.9
CiPaw.01G068800 Carya illinoinensis HOM05D003721 ORTHO05D004303 7.4e-192 674.9 803 57.4
Gohir.D12G110000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 7.4e-192 674.9 774 58.1
Lj7A506T70 Lonicera japonica HOM05D003721 ORTHO05D004303 1.3e-191 674.1 779 57.0
Sabra14G0066200 Salix brachista HOM05D003721 ORTHO05D004303 1.1e-190 671.0 818 52.4
CAN.G78.136 Capsicum annuum HOM05D003721 ORTHO05D004303 1.4e-190 670.6 773 57.1
Gohir.A11G093000 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.5e-189 667.2 763 57.5
Lalb_Chr17g0338961 Lupinus albus HOM05D003721 ORTHO05D004303 3.5e-186 656.0 792 53.3
MD07G1130300 Malus domestica HOM05D003721 ORTHO05D004303 1.0e-185 654.4 776 54.9
CANSAT94G0013 Cannabis sativa HOM05D003721 ORTHO05D004303 5.6e-184 648.7 782 53.5
GSVIVG01027009001 Vitis vinifera HOM05D003721 ORTHO05D004303 9.6e-184 647.9 723 57.0
Glyma.07G062500 Glycine max HOM05D003721 ORTHO05D004303 1.6e-183 647.1 797 52.3
Ca_07946_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 1.1e-182 644.4 788 52.0
Migut.B01806 Erythranthe guttata HOM05D003721 ORTHO05D004303 1.1e-182 644.4 772 57.1
DCAR_008641 Daucus carota HOM05D003721 ORTHO05D004303 1.8e-182 643.7 796 51.6
Glyma.18G239200 Glycine max HOM05D003721 ORTHO05D004303 1.8e-182 643.7 780 52.1
PSO170G3080 Papaver somniferum HOM05D003721 ORTHO05D004303 5.8e-181 638.6 784 53.1
arahy.Tifrunner.gnm1.ann1.X01UQ7 Arachis hypogaea HOM05D003721 ORTHO05D004303 1.0e-180 637.9 793 52.1
Glyma.09G253700 Glycine max HOM05D003721 ORTHO05D004303 2.2e-180 636.7 785 52.9
Hund16678 Selenicereus undatus HOM05D003721 ORTHO05D004303 3.8e-180 636.0 753 56.3
FAN03G0785 Fragaria x ananassa HOM05D003721 ORTHO05D004303 4.9e-180 635.6 770 53.9
TPR.G29569 Trifolium pratense HOM05D003721 ORTHO05D004303 1.8e-177 627.1 772 52.8
Gohir.A12G106100 Gossypium hirsutum HOM05D003721 ORTHO05D004303 5.1e-177 625.5 775 55.5
Sc23g0002500 Simmondsia chinensis HOM05D003721 ORTHO05D004303 5.7e-176 622.1 796 54.4
Duzib138G0478 Durio zibethinus HOM05D003721 ORTHO05D004303 9.6e-176 621.3 804 50.5
Medtr7g079200 Medicago truncatula HOM05D003721 ORTHO05D004303 2.8e-175 619.8 768 52.2
RcHm_v2.0_Chr1g0357861 Rosa chinensis HOM05D003721 ORTHO05D004303 4.8e-175 619.0 779 52.6
Nitab4.5_0003501g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 8.2e-175 618.2 766 55.4
PSO063G0643 Papaver somniferum HOM05D003721 ORTHO05D004303 1.4e-174 617.5 784 53.3
Lj1g0019249 Lotus japonicus HOM05D003721 ORTHO05D004303 3.1e-174 616.3 788 51.6
arahy.Tifrunner.gnm1.ann1.J8U9TP Arachis hypogaea HOM05D003721 ORTHO05D004303 6.9e-174 615.1 793 51.2
Sed0001790 Sechium edule HOM05D003721 ORTHO05D004303 6.9e-174 615.1 785 52.5
Nitab4.5_0000915g0020 Nicotiana tabacum HOM05D003721 ORTHO05D004303 9.0e-174 614.8 763 52.8
SalBow3G1665 Salvia bowleyana HOM05D003721 ORTHO05D004303 1.2e-173 614.4 773 55.0
FAN10G1929 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.4e-173 612.8 770 52.9
Prupe.2G178900 Prunus persica HOM05D003721 ORTHO05D004303 4.5e-173 612.5 783 54.2
FAN10G1794 Fragaria x ananassa HOM05D003721 ORTHO05D004303 1.7e-172 610.5 770 52.7
FAN06G3247 Fragaria x ananassa HOM05D003721 ORTHO05D004303 5.0e-172 609.0 770 52.6
FvH4_7g15532 Fragaria vesca HOM05D003721 ORTHO05D004303 6.5e-172 608.6 770 52.6
AUR62004419 Chenopodium quinoa HOM05D003721 ORTHO05D004303 1.4e-171 607.4 699 55.1
EL10Ac1g00346 Beta vulgaris HOM05D003721 ORTHO05D004303 5.5e-171 605.5 793 53.5
AUR62022625 Chenopodium quinoa HOM05D003721 ORTHO05D004303 5.5e-171 605.5 699 55.4
VMungo0331G1476 Vigna mungo HOM05D003721 ORTHO05D004303 7.2e-171 605.1 823 49.3
Glyma.16G030600 Glycine max HOM05D003721 ORTHO05D004303 2.1e-170 603.6 798 49.9
Eucgr.D02329 Eucalyptus grandis HOM05D003721 ORTHO05D004303 4.6e-170 602.4 785 53.6
Gorai.008G119300 Gossypium raimondii HOM05D003721 ORTHO05D004303 1.6e-167 594.0 775 53.8
arahy.Tifrunner.gnm1.ann1.QXLJ4L Arachis hypogaea HOM05D003721 ORTHO05D004303 1.4e-166 590.9 776 49.9
FAN06G4946 Fragaria x ananassa HOM05D003721 ORTHO05D004303 3.1e-166 589.7 793 50.6
ECA240G1536 Erigeron canadensis HOM05D003721 ORTHO05D004303 6.9e-166 588.6 772 49.9
PGR031G3178 Punica granatum HOM05D003721 ORTHO05D004303 1.2e-165 587.8 781 51.6
MSTRG.20868 Avicennia marina HOM05D003721 ORTHO05D004303 3.4e-165 586.3 769 53.3
CsaV3_6G000920 Cucumis sativus L. HOM05D003721 ORTHO05D004303 1.9e-163 580.5 795 50.7
Gorai.007G104100 Gossypium raimondii HOM05D003721 ORTHO05D004303 4.2e-163 579.3 777 51.4
arahy.Tifrunner.gnm1.ann1.M56506 Arachis hypogaea HOM05D003721 ORTHO05D004303 4.6e-162 575.9 776 49.5
Sed0002636 Sechium edule HOM05D003721 ORTHO05D004303 1.4e-161 574.3 780 50.0
MBI07_g11740_MAGBIO Magnolia biondii HOM05D003721 ORTHO05D004303 2.8e-159 566.6 818 49.4
ClCG06G003380 Citrullus lanatus HOM05D003721 ORTHO05D004303 1.1e-158 564.7 862 48.7
Medtr8g028445 Medicago truncatula HOM05D003721 ORTHO05D004303 3.1e-158 563.1 778 51.9
Ca_03491_v3 Cicer arietinum L. HOM05D003721 ORTHO05D004303 4.5e-157 559.3 781 49.3
TPR.G18168 Trifolium pratense HOM05D003721 ORTHO05D004303 4.7e-154 549.3 798 48.4
Phvul.010G105500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 1.5e-152 544.3 725 49.8
HanXRQChr06g0166991 Helianthus annuus HOM05D003721 ORTHO05D004303 1.8e-150 537.3 683 51.2
Aqoxy5G04062 Aquilegia oxysepala HOM05D003721 ORTHO05D004303 1.2e-149 534.6 805 48.0
Ah.05g180090 Amaranthus hybridus HOM05D003721 ORTHO05D004303 5.9e-149 532.3 784 48.1
Oeu010635.1 Olea europaea HOM05D003721 ORTHO05D004303 1.5e-147 527.7 828 45.7
Thhalv10005812m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 1.4e-145 521.2 778 45.0
Cpa.g.sc11.59 Carica papaya HOM05D003721 ORTHO05D004303 2.3e-145 520.4 527 59.8
Sp5g01840 Schrenkiella parvula HOM05D003721 ORTHO05D004303 2.3e-145 520.4 774 46.0
Phvul.008G057500 Phaseolus vulgaris HOM05D003721 ORTHO05D004303 8.2e-143 511.9 804 45.6
MD01G1072600 Malus domestica HOM05D003721 ORTHO05D004303 4.1e-142 509.6 776 47.4
Gohir.D11G097866 Gossypium hirsutum HOM05D003721 ORTHO05D004303 1.2e-141 508.1 604 55.8
Psat3g105680 Pisum sativum HOM05D003721 ORTHO05D004303 6.5e-140 502.3 619 51.5
AT3G61570 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 3.2e-139 500.0 703 50.6
unitig_52.g17061 Utricularia gibba HOM05D003721 ORTHO05D004303 9.4e-139 498.4 694 49.4
ATR1093G009 Amborella trichopoda HOM05D003721 ORTHO05D004303 6.1e-138 495.7 807 45.8
Lsat_1_v5_gn_3_138600 Lactuca sativa HOM05D003721 ORTHO05D004303 8.0e-138 495.4 777 46.3
AL4G45430 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 1.4e-137 494.6 785 46.9
Haze_15575 Corylus avellana HOM05D003721 ORTHO05D004303 4.0e-137 493.0 610 53.0
AL5G43940 Arabidopsis lyrata HOM05D003721 ORTHO05D004303 5.2e-137 492.7 701 50.2
MELO3C021177.2 Cucumis melo HOM05D003721 ORTHO05D004303 8.8e-137 491.9 696 50.4
Haze_15580 Corylus avellana HOM05D003721 ORTHO05D004303 1.5e-136 491.1 610 52.6
A09p53630 Brassica napus HOM05D003721 ORTHO05D004303 2.0e-136 490.7 772 46.0
Sp5g32820 Schrenkiella parvula HOM05D003721 ORTHO05D004303 2.6e-136 490.3 783 47.4
AT2G46180 Arabidopsis thaliana HOM05D003721 ORTHO05D004303 7.5e-136 488.8 780 44.1
C08p36410 Brassica napus HOM05D003721 ORTHO05D004303 8.3e-135 485.3 773 45.5
BolC8t51224H Brassica oleracea HOM05D003721 ORTHO05D004303 8.3e-135 485.3 773 45.5
BcaC07g40669 Brassica carinata HOM05D003721 ORTHO05D004303 1.1e-134 485.0 773 45.4
BraA09t40785Z Brassica rapa HOM05D003721 ORTHO05D004303 3.1e-134 483.4 772 45.6
C06p27570 Brassica napus HOM05D003721 ORTHO05D004303 2.0e-133 480.7 775 43.4
HPP92_023080 Vanilla planifolia HOM05D003721 ORTHO05D004303 3.5e-133 479.9 782 43.6
CDE02G2110 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 5.9e-133 479.2 768 43.6
A07p25580 Brassica napus HOM05D003721 ORTHO05D004303 3.8e-132 476.5 691 45.3
BraA07t30199Z Brassica rapa HOM05D003721 ORTHO05D004303 8.5e-132 475.3 692 45.4
VMungo1383G3272 Vigna mungo HOM05D003721 ORTHO05D004303 2.5e-131 473.8 732 45.1
Thhalv10001332m.g Eutrema salsugineum HOM05D003721 ORTHO05D004303 8.0e-130 468.8 781 44.9
BcaC07g40653 Brassica carinata HOM05D003721 ORTHO05D004303 3.4e-128 463.4 781 44.7
CDE08G1001 Ceratophyllum demersum HOM05D003721 ORTHO05D004303 7.5e-128 462.2 774 43.7
Lalb_Chr04g0259321 Lupinus albus HOM05D003721 ORTHO05D004303 3.5e-125 453.4 508 55.9
BolC6t37925H Brassica oleracea HOM05D003721 ORTHO05D004303 4.5e-125 453.0 717 43.8
Zm00001eb042060 Zea mays HOM05D003721 ORTHO05D004303 2.9e-124 450.3 705 46.1
BcaC08g45136 Brassica carinata HOM05D003721 ORTHO05D004303 5.2e-121 439.5 713 43.1
Aa31LG1G27570 Aethionema arabicum HOM05D003721 ORTHO05D004303 3.4e-120 436.8 782 44.9
BcaC07g42682 Brassica carinata HOM05D003721 ORTHO05D004303 6.4e-119 432.6 657 45.4
BcaB02g07370 Brassica carinata HOM05D003721 ORTHO05D004303 3.5e-117 426.8 680 43.4
Carub.0004s2886 Capsella rubella HOM05D003721 ORTHO05D004303 4.6e-117 426.4 788 44.3
THA.LOC104817323 Tarenaya hassleriana HOM05D003721 ORTHO05D004303 1.7e-116 424.5 792 43.2
PGSC0003DMG400000197 Solanum tuberosum HOM05D003721 ORTHO05D004303 1.1e-105 388.7 380 60.8
Sabra02G0146000 Salix brachista HOM05D003721 ORTHO05D004303 2.8e-98 364.0 601 42.9
CARHR141460 Cardamine hirsuta HOM05D003721 ORTHO05D004303 2.6e-96 357.5 497 47.7
Os08g0386900 Oryza sativa ssp. japonica HOM05D003721 ORTHO05D004303 3.4e-96 357.1 378 58.5
Mapoly0053s0042 Marchantia polymorpha HOM05D003721 ORTHO05D004303 3.5e-93 347.1 739 36.9
BcaC07g42673 Brassica carinata HOM05D003721 ORTHO05D004303 1.0e-92 345.5 688 40.0
SEGI_16602 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 4.7e-90 336.7 399 52.6
Hma1.2p1_0623F.1_g191170 Hydrangea macrophylla HOM05D003721 ORTHO05D004303 7.4e-75 286.2 364 51.4
TPR.G35781 Trifolium pratense HOM05D003721 ORTHO05D004303 1.0e-68 265.8 388 45.9
Actinidia37722 Actinidia chinensis HOM05D003721 ORTHO05D004074 5.1e-60 236.9 395 44.6
Pp3c3_18730 Physcomitrium patens HOM05D003721 ORTHO05D004303 5.3e-57 226.9 754 31.8
BcaC07g40657 Brassica carinata HOM05D003721 ORTHO05D004303 3.4e-56 224.2 251 55.0
Pp3c12_14500 Physcomitrium patens HOM05D003721 ORTHO05D004303 7.6e-56 223.0 754 30.6
QL01p002178 Quercus lobata HOM05D003721 ORTHO05D004303 7.6e-56 223.0 307 49.5
Actinidia10078 Actinidia chinensis HOM05D003721 ORTHO05D004303 6.7e-52 209.9 383 42.3
Haze_15579 Corylus avellana HOM05D003721 ORTHO05D004303 1.8e-49 201.8 194 61.3
AagrBONN_evm.TU.Sc2ySwM_369.3 Anthoceros agrestis HOM05D003721 ORTHO05D004303 2.4e-49 201.4 324 40.7
Haze_15574 Corylus avellana HOM05D003721 ORTHO05D004303 6.5e-39 166.8 174 57.5
arahy.Tifrunner.gnm1.ann1.LL4IHI Arachis hypogaea HOM05D003721 ORTHO05D004303 3.9e-36 157.5 145 57.9
BcaC08g45231 Brassica carinata HOM05D003721 ORTHO05D004303 1.7e-31 142.1 145 56.6
SGA_v2.0_scaffold4G02274 Striga asiatica HOM05D003721 ORTHO05D004303 2.7e-29 134.8 183 50.3
Lalb_Chr04g0259331 Lupinus albus HOM05D003721 ORTHO05D004303 6.7e-28 130.2 238 40.3
Actinidia37723 Actinidia chinensis HOM05D003721 ORTHO05D004303 1.5e-27 129.0 166 48.8
Cpa.g.sc11.56 Carica papaya HOM05D003721 ORTHO05D004303 5.3e-25 120.6 106 66.0
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 1.9e-22 112.1 108 59.3
Actinidia10079 Actinidia chinensis HOM05D003721 ORTHO05D004303 3.6e-21 107.8 85 69.4
SHI13345 Sapria himalayana HOM05D003721 ORTHO05D004303 6.3e-18 97.1 120 45.8
MCO16G164 Micromonas commoda HOM05D003721 ORTHO05D004303 5.4e-17 94.0 287 30.7
Actinidia21288 Actinidia chinensis HOM05D003721 ORTHO05D004303 5.9e-16 90.5 62 74.2
CBR_g40304 Chara braunii HOM05D001539 ORTHO05D000937 1.7e-15 89.0 153 43.1
Carub.0005s2826 Capsella rubella HOM05D003721 ORTHO05D004303 1.2e-13 82.8 228 33.3
Rhsim11G0030600 Rhododendron simsii HOM05D003721 ORTHO05D004303 3.6e-13 81.3 75 57.3
SEGI_39264 Sequoiadendron giganteum HOM05D003721 ORTHO05D004303 8.0e-13 80.1 361 25.8
Cre12.g495800 Chlamydomonas reinhardtii HOM05D003721 ORTHO05D004303 1.0e-12 79.7 204 31.9
Rhsim05G0209700 Rhododendron simsii HOM05D003721 ORTHO05D004303 2.3e-12 78.6 75 56.0
BcaC08g45137 Brassica carinata HOM05D003721 ORTHO05D004303 3.4e-11 74.7 298 28.9
Actinidia10077 Actinidia chinensis HOM05D003721 ORTHO05D004303 2.4e-09 68.6 155 43.9
arahy.Tifrunner.gnm1.ann1.W0C6E5 Arachis hypogaea HOM05D000200 ORTHO05D000262 1.1e-06 59.7 112 41.1


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