Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 0.0e+00 1151.0 591 100.0
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 3.5e-165 585.9 607 57.5
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 2.5e-163 579.7 595 56.5
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 2.1e-157 560.1 602 57.1
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 1.9e-155 553.5 606 54.6
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 6.2e-154 548.5 606 55.8
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 1.8e-153 547.0 600 53.3
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 5.8e-152 542.0 606 55.1
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 3.8e-151 539.3 654 52.8
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 7.9e-149 531.6 612 53.1
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.3e-148 530.0 603 54.2
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 2.4e-145 520.0 598 51.0
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.0e-145 518.1 587 52.8
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 2.2e-143 513.5 604 51.0
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 3.5e-141 506.1 591 51.4
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 1.8e-140 503.8 605 49.9
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.1e-134 484.6 597 50.1
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 4.6e-133 479.2 560 50.0
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 2.3e-132 476.9 606 49.8
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 3.9e-132 476.1 595 49.6
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 5.7e-131 472.2 599 48.2
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 4.8e-130 469.2 590 49.5
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 8.2e-130 468.4 546 51.8
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 1.5e-128 464.2 594 49.2
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 5.0e-127 459.1 583 49.1
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 6.5e-127 458.8 594 46.8
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 1.4e-126 457.6 602 49.3
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 1.6e-125 454.1 587 48.7
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 1.0e-124 451.4 604 47.8
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 1.0e-124 451.4 582 48.1
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 3.0e-124 449.9 569 48.9
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 3.9e-124 449.5 582 47.8
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 5.1e-124 449.1 548 49.8
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 2.0e-123 447.2 603 46.9
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 3.3e-123 446.4 598 47.2
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 5.7e-123 445.7 606 47.7
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 1.3e-122 444.5 535 51.2
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 1.3e-122 444.5 595 48.2
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 1.7e-122 444.1 699 43.3
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 2.8e-122 443.4 602 46.5
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 3.1e-121 439.9 603 46.6
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 4.1e-121 439.5 596 47.3
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 5.3e-121 439.1 596 47.5
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 6.5e-119 432.2 586 45.6
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 6.5e-119 432.2 610 45.6
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 2.5e-118 430.3 567 48.5
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 3.2e-118 429.9 655 44.3
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 4.2e-118 429.5 579 46.3
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 4.7e-117 426.0 593 46.2
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 3.0e-116 423.3 532 49.4
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 8.8e-116 421.8 524 49.8
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 3.3e-115 419.9 609 44.5
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 7.5e-115 418.7 526 50.0
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 2.2e-114 417.2 646 44.6
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 1.8e-113 414.1 582 46.6
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 2.4e-113 413.7 622 44.2
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 1.6e-112 411.0 589 46.2
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 2.7e-112 410.2 613 44.4
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 1.3e-111 407.9 588 45.7
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 2.9e-111 406.8 624 44.2
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 2.3e-108 397.1 601 44.4
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 3.0e-108 396.7 582 45.0
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 2.6e-107 393.7 613 43.1
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.8e-107 391.7 480 50.2
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 9.8e-107 391.7 602 42.9
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 2.8e-106 390.2 592 45.9
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 4.8e-106 389.4 610 43.1
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 6.3e-106 389.0 590 45.4
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 6.3e-106 389.0 608 43.4
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.3e-106 389.0 608 43.4
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.5e-104 383.3 608 42.8
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 5.9e-104 382.5 621 41.7
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 2.7e-101 373.6 543 45.7
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 1.3e-98 364.8 591 42.6
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.3e-98 364.8 615 41.3
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 3.7e-98 363.2 577 43.3
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.6e-96 357.8 589 42.1
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 1.5e-94 351.3 584 41.6
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 1.5e-94 351.3 585 41.2
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 5.6e-94 349.4 553 43.2
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 9.5e-94 348.6 585 42.1
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 5.7e-91 339.3 604 41.2
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 1.7e-90 337.8 583 42.2
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 1.7e-90 337.8 586 40.6
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 2.9e-90 337.0 583 41.7
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 2.9e-90 337.0 584 41.3
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 4.9e-90 336.3 587 41.2
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 6.4e-90 335.9 587 40.2
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 6.4e-90 335.9 586 42.2
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 1.1e-89 335.1 584 41.3
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 2.4e-89 334.0 583 41.7
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 4.1e-89 333.2 585 41.0
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 2.0e-88 330.9 594 40.9
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.7e-88 330.5 607 39.4
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 4.6e-88 329.7 585 41.4
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.3e-87 328.2 586 40.3
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.3e-87 328.2 586 40.3
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.3e-87 328.2 586 40.3
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 1.7e-87 327.8 414 50.7
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.5e-86 324.7 324 58.3
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 2.8e-85 320.5 618 38.3
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 1.0e-84 318.5 576 39.4
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 2.0e-83 314.3 499 42.7
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 8.6e-79 298.9 528 40.9
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.9e-78 297.7 599 38.1
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 2.8e-77 293.9 506 39.7
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.2e-75 288.5 443 44.0
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 2.6e-75 287.3 594 37.5
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 9.8e-75 285.4 623 35.5
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 4.9e-74 283.1 494 40.3
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 3.3e-70 270.4 618 35.3
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 4.7e-69 266.5 581 36.8
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 4.4e-67 260.0 224 62.5
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 2.2e-66 257.7 605 33.2
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 3.8e-66 256.9 499 39.3
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 2.7e-64 250.8 491 38.7
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.0e-63 247.3 527 37.2
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 2.5e-62 244.2 368 45.1
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 8.9e-60 235.7 613 33.6
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 3.9e-55 220.3 604 33.1
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 1.1e-54 218.8 604 33.1
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.9e-54 218.0 612 32.2
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.3e-52 209.9 605 32.4
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 5.8e-51 206.5 284 44.7
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.9e-49 201.4 423 38.5
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 3.2e-49 200.7 437 36.8
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 4.6e-48 196.8 276 40.6
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 7.6e-43 179.5 333 41.7
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 8.4e-42 176.0 289 42.6
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.2e-37 159.8 518 30.7
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.4e-36 158.7 118 64.4
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.8e-36 158.3 164 51.8
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 2.9e-34 151.0 156 50.6
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 3.2e-33 147.5 429 32.2
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 3.5e-32 144.1 362 35.1
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 6.0e-32 143.3 118 62.7
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 9.6e-30 136.0 119 55.5
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 1.6e-29 135.2 97 67.0
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.8e-28 131.7 385 35.6
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 7.6e-27 126.3 309 29.8
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.9e-25 121.7 149 49.0
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 6.3e-21 106.7 88 56.8
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 8.2e-21 106.3 100 60.0
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 3.4e-19 100.9 130 45.4
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 5.9e-19 100.1 158 38.6
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 1.5e-14 85.5 316 25.9
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 3.1e-12 77.8 125 42.4


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