Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 0.0e+00 1530.8 827 100.0
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 2.2e-125 454.1 673 43.1
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 6.7e-122 442.6 859 36.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.2e-121 441.8 692 42.6
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 4.4e-121 439.9 816 39.2
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 9.7e-121 438.7 725 38.9
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 1.3e-120 438.3 741 39.8
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.0e-118 431.0 758 40.0
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 4.5e-118 429.9 814 37.1
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 1.5e-116 424.9 831 37.1
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 1.6e-115 421.4 819 37.9
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 2.1e-115 421.0 829 37.0
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 8.0e-115 419.1 737 38.3
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 3.0e-114 417.2 857 37.0
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 6.3e-112 409.5 746 38.9
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 2.4e-111 407.5 555 44.7
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 1.8e-106 391.3 748 37.3
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 1.5e-105 388.3 728 36.5
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 2.0e-105 387.9 616 41.9
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 1.7e-104 384.8 744 36.3
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 2.8e-104 384.0 764 35.7
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 4.1e-103 380.2 788 35.8
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 1.7e-101 374.8 743 37.6
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 2.3e-101 374.4 509 44.8
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.9e-101 374.0 801 34.5
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 6.6e-101 372.9 747 36.5
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 7.3e-100 369.4 727 36.6
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 9.5e-100 369.0 742 35.4
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 2.3e-98 364.4 822 34.8
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 3.0e-98 364.0 815 36.9
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 3.0e-98 364.0 743 35.3
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 5.2e-98 363.2 840 33.3
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.5e-97 361.7 823 34.3
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 3.4e-97 360.5 824 35.8
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 7.5e-97 359.4 862 33.9
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 9.8e-97 359.0 722 33.9
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.7e-96 358.2 622 39.4
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.2e-96 357.8 884 33.5
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.3e-96 355.9 884 33.6
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 4.1e-95 353.6 810 33.7
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 2.0e-94 351.3 721 34.4
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.3e-93 347.8 813 33.2
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 8.6e-93 345.9 882 33.2
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 1.9e-92 344.7 465 44.7
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.1e-91 341.3 615 36.7
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 2.8e-91 340.9 828 33.3
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 3.6e-91 340.5 843 33.2
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 4.7e-91 340.1 835 33.4
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 1.4e-90 338.6 753 34.9
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 3.4e-89 334.0 827 33.4
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 6.4e-88 329.7 731 34.2
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 1.4e-87 328.6 752 34.4
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 3.5e-86 323.9 769 34.2
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 3.0e-85 320.9 760 34.3
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 6.6e-85 319.7 759 34.0
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 5.6e-84 316.6 782 32.2
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 1.1e-82 312.4 766 32.8
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 2.3e-82 311.2 580 36.0
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 2.3e-82 311.2 783 32.6
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 3.1e-82 310.8 805 31.3
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 5.2e-82 310.1 794 31.4
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 8.9e-82 309.3 475 38.7
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 2.0e-81 308.1 788 31.2
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 3.4e-81 307.4 507 38.9
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 5.8e-81 306.6 561 36.5
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 1.3e-80 305.4 580 35.3
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 3.7e-80 303.9 784 33.2
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 4.9e-80 303.5 796 31.4
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 1.4e-79 302.0 520 37.1
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 1.9e-79 301.6 464 38.6
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 3.2e-79 300.8 782 32.6
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 1.6e-78 298.5 583 35.8
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 6.0e-78 296.6 786 31.6
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 3.0e-77 294.3 726 34.0
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 6.6e-77 293.1 796 31.9
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 6.6e-77 293.1 769 31.7
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 7.3e-76 289.7 469 37.1
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 9.5e-76 289.3 532 38.0
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 4.7e-75 287.0 762 30.1
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 8.9e-74 282.7 429 38.5
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 4.6e-70 270.4 479 37.4
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 8.7e-69 266.2 744 30.8
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 1.5e-65 255.4 786 29.8
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 1.1e-63 249.2 526 34.2
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 1.4e-63 248.8 535 33.1
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 1.6e-62 245.4 526 33.8
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 3.5e-62 244.2 547 32.5
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 1.7e-61 241.9 542 33.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 2.3e-61 241.5 530 33.2
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 3.0e-61 241.1 524 33.0
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 3.0e-61 241.1 560 32.1
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 3.9e-61 240.7 771 28.3
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 1.1e-60 239.2 536 33.4
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 1.3e-59 235.7 529 32.9
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.2e-57 229.2 366 37.2
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 2.0e-57 228.4 440 33.6
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.3e-56 225.7 441 33.6
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 8.4e-56 223.0 397 36.0
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 3.5e-46 191.0 183 45.9
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 7.9e-46 189.9 494 30.4
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 7.6e-41 173.3 176 46.6
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 1.0e-40 172.9 651 27.2
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 3.1e-34 151.4 396 27.5
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 5.3e-34 150.6 391 27.1
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 9.0e-34 149.8 628 28.3
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 7.6e-33 146.7 312 35.9
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 2.9e-32 144.8 312 35.6
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 3.2e-31 141.4 295 33.2
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 9.7e-28 129.8 229 32.3
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 1.3e-27 129.4 224 39.7
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 8.2e-27 126.7 265 28.7
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.5e-25 122.5 263 31.6
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 6.5e-24 117.1 190 43.7
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 3.3e-12 78.2 278 25.5
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.7e-11 74.7 88 42.0
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 6.3e-11 73.9 126 41.3
MBI12_g31451_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 4.2e-07 61.2 110 36.4


User provided reference genes

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