Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g33090 Coffea canephora HOM05D005965 ORTHO05D007283 1.7e-249 865.5 435 100.0
Oeu043357.2 Olea europaea HOM05D005965 ORTHO05D007283 6.0e-170 601.3 444 70.7
CSS0001755 Camellia sinensis var. sinensis HOM05D005965 ORTHO05D007283 5.6e-168 594.7 452 70.1
Actinidia21493 Actinidia chinensis HOM05D005965 ORTHO05D007283 1.2e-167 593.6 450 69.8
GSVIVG01031150001 Vitis vinifera HOM05D005965 ORTHO05D007283 3.1e-166 589.0 448 70.1
MSTRG.20421 Avicennia marina HOM05D005965 ORTHO05D007283 2.2e-164 582.8 434 69.6
DCAR_003352 Daucus carota HOM05D005965 ORTHO05D007283 3.2e-163 578.9 467 65.3
Prupe.6G321300 Prunus persica HOM05D005965 ORTHO05D007283 6.0e-162 574.7 451 68.1
MD04G1201200 Malus domestica HOM05D005965 ORTHO05D007283 7.8e-162 574.3 457 67.6
Peaxi162Scf00949g00112 Petunia axillaris HOM05D005965 ORTHO05D007283 7.8e-162 574.3 443 69.8
Rhsim05G0139400 Rhododendron simsii HOM05D005965 ORTHO05D007283 3.0e-161 572.4 490 63.9
Solyc10g044780.2 Solanum lycopersicum HOM05D005965 ORTHO05D007283 8.6e-161 570.9 443 69.3
Cpa.g.sc48.91 Carica papaya HOM05D005965 ORTHO05D007283 1.1e-160 570.5 446 68.6
Sopen10g013470 Solanum pennellii HOM05D005965 ORTHO05D007283 7.3e-160 567.8 443 69.1
Gohir.D11G277600 Gossypium hirsutum HOM05D005965 ORTHO05D007283 2.8e-159 565.8 454 66.3
QL03p021207 Quercus lobata HOM05D005965 ORTHO05D007283 2.8e-159 565.8 454 68.1
PGSC0003DMG400007478 Solanum tuberosum HOM05D005965 ORTHO05D007283 4.7e-159 565.1 443 68.8
Atru.chr2.26 Acer truncatum HOM05D005965 ORTHO05D007283 1.1e-158 563.9 451 66.7
Sabra13G0016500 Salix brachista HOM05D005965 ORTHO05D007283 3.1e-158 562.4 455 68.6
Ciclev10001128m.g Citrus clementina HOM05D005965 ORTHO05D007283 5.2e-158 561.6 454 67.6
CiPaw.07G021000 Carya illinoinensis HOM05D005965 ORTHO05D007283 8.9e-158 560.8 457 65.9
Gorai.007G299800 Gossypium raimondii HOM05D005965 ORTHO05D007283 8.9e-158 560.8 460 65.7
Potri.013G017500 Populus trichocarpa HOM05D005965 ORTHO05D007283 2.0e-157 559.7 454 68.3
CAN.G1.32 Capsicum annuum HOM05D005965 ORTHO05D007283 4.4e-157 558.5 443 67.7
Cfa006624 Carpinus fangiana HOM05D005965 ORTHO05D007283 3.2e-155 552.4 456 66.4
Migut.G01001 Erythranthe guttata HOM05D005965 ORTHO05D007283 5.4e-155 551.6 439 67.4
Sc16g0008610 Simmondsia chinensis HOM05D005965 ORTHO05D007283 5.4e-155 551.6 446 65.5
Nitab4.5_0001129g0130 Nicotiana tabacum HOM05D005965 ORTHO05D007283 1.2e-154 550.4 455 66.8
Sabra13G0020500 Salix brachista HOM05D005965 ORTHO05D007283 4.6e-154 548.5 428 70.1
ECA246G4331 Erigeron canadensis HOM05D005965 ORTHO05D007283 7.8e-154 547.7 437 65.9
Lj1g0019406 Lotus japonicus HOM05D005965 ORTHO05D007283 1.3e-153 547.0 451 64.3
Manes.08G118100 Manihot esculenta HOM05D005965 ORTHO05D007283 3.9e-153 545.4 448 65.4
PGR031G2641 Punica granatum HOM05D005965 ORTHO05D007283 5.1e-153 545.0 446 63.9
FAN14G0885 Fragaria x ananassa HOM05D005965 ORTHO05D007283 1.1e-152 543.9 447 65.5
TWI12G0462 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 4.3e-152 542.0 449 65.3
TAR362G0609 Trochodendron aralioides HOM05D005965 ORTHO05D007283 1.6e-151 540.0 450 65.3
RcHm_v2.0_Chr3g0455661 Rosa chinensis HOM05D005965 ORTHO05D007283 2.8e-151 539.3 447 65.5
Gohir.A11G267700 Gossypium hirsutum HOM05D005965 ORTHO05D007283 1.2e-149 533.9 453 64.0
Sed0024378 Sechium edule HOM05D005965 ORTHO05D007283 1.2e-149 533.9 461 64.4
EL10Ac4g09921 Beta vulgaris HOM05D005965 ORTHO05D007283 7.6e-149 531.2 449 63.5
PSO151G0070 Papaver somniferum HOM05D005965 ORTHO05D007283 9.9e-149 530.8 448 64.1
Eucgr.H04531 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.3e-148 530.4 446 64.3
Medtr7g113100 Medicago truncatula HOM05D005965 ORTHO05D007283 1.3e-148 530.4 454 62.6
Aqoxy2G02987 Aquilegia oxysepala HOM05D005965 ORTHO05D007283 1.7e-148 530.0 446 64.3
ClCG02G015450 Citrullus lanatus HOM05D005965 ORTHO05D007283 1.7e-148 530.0 454 65.2
Dinv40342 Davidia involucrata HOM05D005965 ORTHO05D007283 2.2e-148 529.6 345 78.3
vmacro19747 Vaccinium macrocarpon HOM05D005965 ORTHO05D007283 2.4e-147 526.2 414 67.1
Lalb_Chr18g0045721 Lupinus albus HOM05D005965 ORTHO05D007283 3.2e-147 525.8 457 61.5
Psat0s4314g0040 Pisum sativum HOM05D005965 ORTHO05D007283 4.2e-147 525.4 478 60.3
FAN02G0246 Fragaria x ananassa HOM05D005965 ORTHO05D007283 7.1e-147 524.6 448 63.6
TPR.G33209 Trifolium pratense HOM05D005965 ORTHO05D007283 7.1e-147 524.6 451 63.0
CsaV3_2G006620 Cucumis sativus L. HOM05D005965 ORTHO05D007283 9.3e-147 524.2 454 63.7
Lj9A144T46 Lonicera japonica HOM05D005965 ORTHO05D007283 1.2e-146 523.9 341 78.0
Nn3g21434 Nelumbo nucifera HOM05D005965 ORTHO05D007283 2.1e-146 523.1 447 63.3
arahy.Tifrunner.gnm1.ann1.DHC6FB Arachis hypogaea HOM05D005965 ORTHO05D007283 4.6e-146 521.9 437 63.8
arahy.Tifrunner.gnm1.ann1.79NSX3 Arachis hypogaea HOM05D005965 ORTHO05D007283 1.3e-145 520.4 437 63.6
HanXRQChr03g0072671 Helianthus annuus HOM05D005965 ORTHO05D007283 6.6e-145 518.1 439 65.8
THA.LOC104818713 Tarenaya hassleriana HOM05D005965 ORTHO05D007283 6.6e-145 518.1 454 60.8
Ah.04g161100 Amaranthus hybridus HOM05D005965 ORTHO05D007283 1.5e-144 516.9 448 62.7
unitig_699.g19668 Utricularia gibba HOM05D005965 ORTHO05D007283 4.3e-144 515.4 443 61.9
Hma1.2p1_1292F.1_g273670 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 5.6e-144 515.0 339 76.7
Hund07094 Selenicereus undatus HOM05D005965 ORTHO05D007283 2.1e-143 513.1 457 61.7
VMungo0540G0496 Vigna mungo HOM05D005965 ORTHO05D007283 2.8e-143 512.7 450 62.2
COL.COLO4_10514 Corchorus olitorius HOM05D005965 ORTHO05D007283 1.1e-142 510.8 382 69.4
HanXRQChr03g0072661 Helianthus annuus HOM05D005965 ORTHO05D007283 1.8e-142 510.0 462 63.0
Thhalv10020753m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 2.4e-142 509.6 450 62.0
Lsat_1_v5_gn_9_124801 Lactuca sativa HOM05D005965 ORTHO05D007283 5.3e-142 508.4 451 62.3
Carub.0003s0477 Capsella rubella HOM05D005965 ORTHO05D007283 6.9e-142 508.1 448 61.4
MBI19_g29225_MAGBIO Magnolia biondii HOM05D005965 ORTHO05D007283 5.8e-141 505.0 455 61.3
AL3G16080 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 1.7e-140 503.4 447 60.4
AT3G05480 Arabidopsis thaliana HOM05D005965 ORTHO05D007283 2.2e-140 503.1 449 60.6
Sp3g04310 Schrenkiella parvula HOM05D005965 ORTHO05D007283 8.4e-140 501.1 450 60.7
Glyma.19G233800 Glycine max HOM05D005965 ORTHO05D007283 1.1e-139 500.7 450 60.7
FvH4_6g06510 Fragaria vesca HOM05D005965 ORTHO05D007283 1.2e-138 497.3 373 69.4
SGA_v2.0_scaffold172G38992 Striga asiatica HOM05D005965 ORTHO05D007283 1.2e-138 497.3 456 59.4
Glyma.03G236100 Glycine max HOM05D005965 ORTHO05D007283 1.6e-138 496.9 450 60.7
FAN05G3147 Fragaria x ananassa HOM05D005965 ORTHO05D007283 2.7e-138 496.1 373 69.2
Migut.G01092 Erythranthe guttata HOM05D005965 ORTHO05D007283 3.0e-137 492.7 333 73.9
BcaC05g30118 Brassica carinata HOM05D005965 ORTHO05D007283 5.1e-137 491.9 444 60.1
Ca_05803_v3 Cicer arietinum L. HOM05D005965 ORTHO05D007283 6.7e-137 491.5 397 65.0
Phvul.006G090000 Phaseolus vulgaris HOM05D005965 ORTHO05D007283 2.5e-136 489.6 452 60.0
C05p61750 Brassica napus HOM05D005965 ORTHO05D007283 2.8e-135 486.1 449 59.0
BolC5t34833H Brassica oleracea HOM05D005965 ORTHO05D007283 5.8e-133 478.4 464 57.1
BcaC05g30164 Brassica carinata HOM05D005965 ORTHO05D007283 1.3e-132 477.2 472 56.1
AUR62000770 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.7e-132 476.9 403 63.5
Hma1.2p1_1292F.1_g273680 Hydrangea macrophylla HOM05D005965 ORTHO05D007283 8.4e-132 474.6 336 71.7
Eucgr.H04558 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.3e-129 466.5 444 58.3
Aa31LG5G15920 Aethionema arabicum HOM05D005965 ORTHO05D007283 1.9e-128 463.4 493 52.5
ATR0796G244 Amborella trichopoda HOM05D005965 ORTHO05D007283 2.5e-123 446.4 468 54.5
HPP92_000400 Vanilla planifolia HOM05D005965 ORTHO05D007283 4.2e-123 445.7 451 54.3
HPP92_000403 Vanilla planifolia HOM05D005965 ORTHO05D007283 1.2e-122 444.1 451 54.1
Thecc.05G312500 Theobroma cacao HOM05D005965 ORTHO05D007283 2.1e-122 443.4 371 63.6
Migut.G01320 Erythranthe guttata HOM05D005965 ORTHO05D007283 2.5e-120 436.4 336 67.3
SEGI_33282 Sequoiadendron giganteum HOM05D005965 ORTHO05D007283 1.4e-115 420.6 482 48.1
SHI18108 Sapria himalayana HOM05D005965 ORTHO05D007283 3.0e-113 412.9 298 71.1
AUR62005199 Chenopodium quinoa HOM05D005965 ORTHO05D007283 1.4e-110 404.1 389 56.3
Haze_04145 Corylus avellana HOM05D005965 ORTHO05D007283 1.8e-110 403.7 256 78.1
Nitab4.5_0001057g0090 Nicotiana tabacum HOM05D005965 ORTHO05D007283 5.9e-109 398.7 348 62.9
Os03g0345100 Oryza sativa ssp. japonica HOM05D005965 ORTHO05D007283 4.2e-107 392.5 446 50.4
CDE02G1352 Ceratophyllum demersum HOM05D005965 ORTHO05D007283 6.7e-105 385.2 363 58.7
Eucgr.H04576 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.5e-104 384.0 254 74.8
BraA05t23035Z Brassica rapa HOM05D005965 ORTHO05D007283 1.7e-103 380.6 359 58.5
MELO3C031536.2 Cucumis melo HOM05D005965 ORTHO05D007283 1.7e-103 380.6 365 58.6
CARHR079860 Cardamine hirsuta HOM05D005965 ORTHO05D007283 7.0e-102 375.2 256 70.3
Eucgr.H04573 Eucalyptus grandis HOM05D005965 ORTHO05D007283 1.4e-94 350.9 259 67.2
Mapoly0078s0014 Marchantia polymorpha HOM05D005965 ORTHO05D007283 3.5e-93 346.3 350 54.3
Eucgr.H04556 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-92 343.2 303 62.7
Pp3c15_2650 Physcomitrium patens HOM05D005965 ORTHO05D007283 2.1e-90 337.0 356 48.9
Pp3c7_570 Physcomitrium patens HOM05D005965 ORTHO05D007283 8.8e-89 331.6 506 41.7
SMO134G0282 Selaginella moellendorffii HOM05D005965 ORTHO05D007283 7.5e-88 328.6 344 50.6
BraA05t19070Z Brassica rapa HOM05D005965 ORTHO05D007283 1.0e-84 318.2 246 63.8
SHI32441 Sapria himalayana HOM05D005965 ORTHO05D007283 2.3e-81 307.0 295 58.3
CBR_g180 Chara braunii HOM05D005965 ORTHO05D007283 4.4e-80 302.8 395 44.3
Zm00001eb016590 Zea mays HOM05D005965 ORTHO05D007283 1.2e-77 294.7 329 48.0
Eucgr.H04569 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.9e-68 263.5 448 42.2
Eucgr.H04571 Eucalyptus grandis HOM05D005965 ORTHO05D007283 2.3e-60 237.3 443 40.2
Thecc.07G184800 Theobroma cacao HOM05D005965 ORTHO05D007283 3.5e-53 213.4 235 54.5
Psat6g098120 Pisum sativum HOM05D005965 ORTHO05D007283 6.8e-49 199.1 163 60.1
AL3G16050 Arabidopsis lyrata HOM05D005965 ORTHO05D007283 6.4e-47 192.6 285 38.6
Thecc.07G184700 Theobroma cacao HOM05D005965 ORTHO05D007283 5.2e-41 172.9 192 53.6
Thhalv10022144m.g Eutrema salsugineum HOM05D005965 ORTHO05D007283 1.7e-39 167.9 301 38.9
MCO01G074 Micromonas commoda HOM05D005965 ORTHO05D007283 2.0e-32 144.4 325 32.9
PSO017G4250 Papaver somniferum HOM05D005965 ORTHO05D007283 5.8e-32 142.9 123 61.0
QL03p021253 Quercus lobata HOM05D005965 ORTHO05D007283 4.6e-29 133.3 95 70.5
TAR633G2454 Trochodendron aralioides HOM05D005965 ORTHO05D007283 7.3e-27 125.9 134 53.0
DCAR_023086 Daucus carota HOM05D007620 ORTHO05D009568 1.2e-24 118.6 60 86.7
CARHR079870 Cardamine hirsuta HOM05D005965 ORTHO05D007283 2.6e-24 117.5 193 45.1
Eucgr.H04575 Eucalyptus grandis HOM05D005965 ORTHO05D007283 9.9e-24 115.5 125 48.0
Haze_04144 Corylus avellana HOM05D005965 ORTHO05D007283 2.2e-23 114.4 127 56.7
Cre16.g682950 Chlamydomonas reinhardtii HOM05D005965 ORTHO05D007283 6.4e-23 112.8 223 35.4
Nitab4.5_0000524g0030 Nicotiana tabacum HOM05D005965 ORTHO05D007283 5.3e-17 93.2 205 40.0
TWI56G1489 Tripterygium wilfordii HOM05D005965 ORTHO05D007283 1.0e-15 89.0 73 63.0
PGSC0003DMG401006600 Solanum tuberosum HOM05D032728 ORTHO05D007283 5.3e-09 66.6 47 63.8
SMO274G0013 Selaginella moellendorffii HOM05D005965 ORTHO05D376736 3.2e-06 57.4 118 38.1


User provided reference genes

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