Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cc02_g31110 Coffea canephora HOM05D014961 ORTHO05D010667 9.8e-197 689.9 333 100.0
Actinidia30913 Actinidia chinensis HOM05D014961 ORTHO05D010667 2.4e-22 110.5 272 32.7
Hma1.2p1_0083F.1_g042640 Hydrangea macrophylla HOM05D014961 ORTHO05D010667 6.2e-18 95.9 225 34.7
Dinv03360 Davidia involucrata HOM05D002010 ORTHO05D001602 1.1e-17 95.1 339 26.5
Atru.chr2.648 Acer truncatum HOM05D009433 ORTHO05D010667 4.0e-17 93.2 315 27.6
Potri.013G032900 Populus trichocarpa HOM05D009433 ORTHO05D010667 6.9e-17 92.4 253 34.8
Dinv17748 Davidia involucrata HOM05D014961 ORTHO05D010667 3.4e-16 90.1 255 32.2
TAR362G0181 Trochodendron aralioides HOM05D009433 ORTHO05D010667 3.2e-14 83.6 250 32.0
GSVIVG01021903001 Vitis vinifera HOM05D009433 ORTHO05D010667 4.2e-14 83.2 205 33.7
CAN.G134.197 Capsicum annuum HOM05D020797 ORTHO05D022199 5.5e-14 82.8 281 28.5
CSS0038751 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 1.6e-13 81.3 220 30.5
Aqoxy5G00608 Aquilegia oxysepala HOM05D009433 ORTHO05D010667 1.0e-12 78.6 243 31.7
Sabra13G0032700 Salix brachista HOM05D009433 ORTHO05D010667 2.3e-12 77.4 246 32.1
Manes.08G126300 Manihot esculenta HOM05D009433 ORTHO05D010667 1.9e-11 74.3 255 28.6
CSS0022263 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 5.7e-11 72.8 210 30.0
Actinidia05752 Actinidia chinensis HOM05D014961 ORTHO05D010667 2.1e-10 70.9 343 25.1
Potri.005G047000 Populus trichocarpa HOM05D009433 ORTHO05D010667 1.8e-09 67.8 168 33.9
CSS0040293 Camellia sinensis var. sinensis HOM05D014961 ORTHO05D010667 6.9e-09 65.9 210 29.0
QL03p000754 Quercus lobata HOM05D009433 ORTHO05D010667 1.5e-08 64.7 155 33.5
PGR004G0763 Punica granatum HOM05D047824 ORTHO05D050612 1.0e-07 62.0 285 28.8
Rhsim10G0110300 Rhododendron simsii HOM05D000105 ORTHO05D010667 3.8e-07 60.1 114 36.0
COL.COLO4_13630 Corchorus olitorius HOM05D009433 ORTHO05D010667 8.4e-07 58.9 116 34.5
Thecc.05G291900 Theobroma cacao HOM05D009433 ORTHO05D010667 8.4e-07 58.9 338 26.9
Rhsim10G0109900 Rhododendron simsii HOM05D014961 ORTHO05D010667 3.2e-06 57.0 120 35.0
Ciclev10001604m.g Citrus clementina HOM05D009433 ORTHO05D010667 5.5e-06 56.2 390 24.4
Cpa.g.sc117.35 Carica papaya HOM05D009433 ORTHO05D010667 7.2e-06 55.8 113 38.9
Nn4g26003 Nelumbo nucifera HOM05D009433 ORTHO05D010667 9.3e-06 55.5 294 24.5


User provided reference genes

Program Settings